Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139405537
Help
Entry
139405537 CDS
T10872
Name
(RefSeq) tubulin monoglutamylase TTLL4 isoform X1
KO
K16601
tubulin polyglutamylase TTLL4 [EC:
6.3.2.62
]
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Brite
Enzymes [BR:
ocla01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.62 beta-tubulin-glutamate ligase
139405537
Cilium and associated proteins [BR:
ocla03037
]
Primary cilia and associated proteins
Tubulin polyglutamylase and associated proteins
139405537
Cytoskeleton proteins [BR:
ocla04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Tubulin modification proteins
Tubulin polyglutamylases
139405537
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
139405537
NCBI-ProteinID:
XP_071004051
LinkDB
All DBs
Position
3:complement(88718719..88771660)
Genome browser
AA seq
1293 aa
AA seq
DB search
MASNGAEDKLNTRASCSRSSTLIIRAKSAVFHTADSPTRPFSSHEKKTLQSCASVPRVTS
DSIGQLNARVGQTQNNHLHTASGTPLQRAYNRSVPAATYLANKPQRPGSAAANLANGHSN
GHCQPTVLSKSTQISSADIISYRHNPGVLEPTVNSYWPSCNLESLNLRSRILARKRALSP
QPAPYPTCPCPPKAERVPDSQNNAASQPAESTTTTSMPTNQSVPWTSGKLRDNSKGFMRP
TMGKVPSCPRQETTQTRDSAKPLSPQTKSASYCRSGDNGDGKTQTKFTHHPPNTVPLQDR
SSHHQDVSLDQTWRLQDPHQFESLMAVDMEGHSQRLGFCAAVHGAPGAPHNTSTERIRKV
NSEVEFTEAVRKLTQSRSALTPHPRNGTINSFTTGTPGSNVDPVQIGKAMTNSPVISVSH
SPAPAKPSVPLCLTMRDQPVSMETSSASGLDSNTTTNSSSTTASMAPLPHAGITPTQSST
QASATVSSTAGITLTQSPTQASATASSTAGITLTQPYTQATATASSGAGITPTQSYTQDS
ATASSGASSIPENTEMGSESASGTSQSQRPSVTSVTTQISAIHLTKERSVLSLQGGYSSS
RSPPGLREEQQAESPQLSSPQSVAMQEDGDRGEEDYPDDELENDCSGDDDDEGSDCSSMN
DASSTASIPVLPNITDEELMSPELEDEGELKPALVPSMFPLIPPTLYFSTANQRVEPLPP
EQRKLLKWKMSTVTPNIVKHTIARSHFKVTKKSHDWLGCWGHHMKSPGFKAIREYQKLNH
FPGSFQIGRKDRLWRNLSKMQAQFGKREFSFFPRSFVLPQDIKLLRKAWEDSGSRQKWII
KPPASARGIGIQVIHKWSQMPCKRPLLVQKYLHKPYLISGNKFDLRIYVYVTCYDPLRVY
IFQDGLVRFASCKYSSSMKSLGNKFMHLTNYSVNKRNSDYQSNDSDKACQGHKWALKALW
HYLGCKGVNTTLIWEKIKDIVMKTIIASDPYVNTLVKLHLRSPYSCHELFGFDIMLDENL
KPWVLEVNISPSLHSSTALDVAIKGQMIRDVLNLAGFLLPQREEVLPSASSSASSLCGGT
RERSRPEISTDEKVKRAFYLSQRFADQVQSCSRLKSQGTTGKFPRQEVDFFSSILDVLTP
EDVRVLAETEDELSRKGEFERVFPSNGSSRYLRFFKQPRYLNILLNQWETKYGQNRREGV
CVLRSLCQKGVHLGTTDPAHLWSKSTYVPKSDHPRQEPSRSSVVVSHRTRPQPDQEEYCF
SQEVTTSLLGSSSPSLATESTASVPPRDEEFEG
NT seq
3882 nt
NT seq
+upstream
nt +downstream
nt
atggcctccaatggagctgaagacaagttgaatacaagggcctcctgctcccggtcatca
actctcataattcgagccaagtcagcagtgtttcatactgctgatagtcccactaggccc
ttcagctcgcatgagaagaagacccttcagtcctgtgccagtgtcccccgggtcaccagt
gactctataggtcagctcaatgcgagggtgggtcagactcagaacaaccacctccatact
gcctcagggacccctctacaacgtgcctacaaccgttctgtgcctgctgccacttaccta
gctaacaagccacagcgtcctggtagcgcagctgctaatttagctaatggtcatagtaat
ggtcactgtcaaccaactgttctctctaagagtacacagatatctagtgctgacattatc
tcatacagacataaccctggtgtgttagagccaaccgtaaacagctattggcccagctgc
aacttggaatcactaaatttaagatcacggatcctggcccgcaaaagagccttgtcgccc
cagcctgctccctatccaacgtgcccctgtccaccaaaggcagaacgtgtcccagactcg
cagaacaacgctgcttcacagcctgctgaaagcaccactaccaccagcatgcccaccaac
cagtcagtcccctggaccagtggcaagctgagagacaatagcaaagggtttatgaggccc
actatgggtaaagtgccttcctgtcccagacaggagactacccagacaagagactcagca
aaacctttgtctccccagaccaaatcggcctcctattgccgtagtggggacaatggggat
ggcaaaacccagactaagttcacacaccacccccccaacactgtgcctttgcaggatagg
tcatcccaccaccaggatgtgtcactggatcagacatggaggctccaggacccgcatcag
tttgagagcctgatggcagtagacatggagggtcactcccagaggctgggcttttgtgct
gctgtccatggggctcctggagctcctcataacacatcaacagagaggatcaggaaggtc
aactctgaggtggagtttactgaggctgtgaggaagctgacccagtcacggagcgcgctc
acccctcatcccaggaacgggactattaatagttttactactggaacaccagggtccaat
gtggatccagtccagattggtaaagcaatgactaatagccctgtcatctctgtcagccac
agccctgctccagccaaaccctctgtaccactctgccttactatgagagaccagcctgtg
tccatggagacctccagtgcctctggcctcgacagtaacaccacaacaaacagtagtagc
acaacagcctccatggcacctctaccccatgcagggataactccaacacagtcctctacc
caggccagtgccacagttagttctactgcagggataactctaacccagtcccctacccag
gccagtgccacagctagttctactgcagggataactctgacccagccctatacccaggcc
actgccacagctagttctggtgcagggataactccaacccagtcctatacccaggacagt
gccacagctagttctggtgctagttccatcccagagaacactgagatgggttctgagtcc
gcctcaggtacttctcagagtcagaggccttctgtcacctcggtgaccacccagatatca
gccatacacctgaccaaggagaggagcgtcctgtctctacaggggggctacagctcctcc
cggtccccccctggcctgagggaggaacaacaggctgagtcacctcagctctccagtcca
cagagtgttgccatgcaggaggatggagacagaggggaagaggactatcctgatgatgag
ctggagaatgactgcagtggtgatgatgatgatgaagggtctgactgctcctctatgaat
gatgcctcgtccacagcctccatacccgtcctgccaaatataacggatgaggagctgatg
agccctgaattagaggatgagggggagctgaagccagctctggtccccagcatgttcccc
ctcattccccctacactgtatttcagcactgccaaccagagagtggagcccctgccacca
gaacagaggaagctgctcaaatggaagatgagcactgtgactcccaacatagtcaaacac
accatcgccaggtcacactttaaagtcaccaagaaaagtcatgattggcttggctgctgg
ggtcaccatatgaagtctcctgggttcaaggccatcagagaataccagaagttaaaccac
ttccccggctcgttccagatcggtcgtaaggaccgtctgtggaggaacctgtctaagatg
caggctcagtttggtaagagggaattcagcttcttccctcgctccttcgttcttcctcag
gacatcaagctactgaggaaagcctgggaggacagtggtagcaggcagaaatggatcatc
aagccgcctgcgtctgctcgtggtattggaatccaggttattcacaagtggagtcagatg
ccatgcaagagaccactcctggttcagaagtatctgcacaagccctacctcatcagtggg
aataagtttgacctgcgtatctatgtgtatgtgacctgttacgacccactccgcgtttac
atcttccaggacgggcttgtccgcttcgccagctgcaagtactcgtcgtctatgaaaagc
cttggcaacaagtttatgcacctgaccaactacagcgtgaacaagaggaactcagactat
cagagcaatgacagtgacaaggcctgtcagggacacaagtgggctctgaaggcgctgtgg
cactacctgggttgtaagggagtcaacaccacgctgatctgggagaagatcaaggacatc
gtcatgaaaaccatcattgcgtctgacccatatgtcaacacgctggtcaagcttcacctg
cgttccccctacagctgtcacgagctgtttggctttgacatcatgctggatgagaacctc
aagccttgggttctggaggtcaacatctcaccaagcctccactccagcaccgctctggac
gtggccattaagggccagatgatcagagatgtgttgaacctggcgggtttccttctgcct
cagagagaagaggtgcttccctccgccagcagctctgccagcagtctgtgtggagggaca
cgggagagatccagacctgagatttcaactgatgagaaagtcaagcgggccttctacctg
agccagcgcttcgcagatcaggtacagtcatgcagccgtctgaagagccaaggaactact
gggaagtttcccagacaggaagtcgacttcttctcctccatcctggacgttctgactcca
gaggacgtacgtgtcctggctgagacggaggacgagctgagcaggaagggagagtttgaa
cgggtcttcccctccaacggctcctcacgatacctgcgcttcttcaaacaaccacgctac
ctcaacatcctgctcaaccagtgggagaccaagtacggacagaacaggagagaaggagtc
tgtgtgctgaggagtctgtgtcagaaaggagtccatctaggaaccaccgaccctgcacat
ctatggtccaagtcgacctatgttcccaagtctgatcaccccaggcaggagccaagcaga
tcgagtgtggtggtgagtcacagaaccaggccccagccagaccaggaggagtactgtttc
tcccaggaggtcaccacctccctcctgggctcctccagccccagcctggccaccgagtct
acagccagcgtgccacccagagatgaggagttcgagggttaa
DBGET
integrated database retrieval system
