Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139405548
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Entry
139405548 CDS
T10872
Name
(RefSeq) trichohyalin-like
KO
K16464
centrosomal protein CEP250
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ocla03036
]
139405548
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
ocla03037
]
139405548
Chromosome and associated proteins [BR:
ocla03036
]
Eukaryotic type
Centrosome formation proteins
Centriole proteins
139405548
Cilium and associated proteins [BR:
ocla03037
]
Other cilia and associated proteins
Other cilium assembly proteins
139405548
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rootletin
GAS
Motif
Other DBs
NCBI-GeneID:
139405548
NCBI-ProteinID:
XP_071004065
LinkDB
All DBs
Position
3:complement(89553038..89656171)
Genome browser
AA seq
2358 aa
AA seq
DB search
METALLDGWKEERAELRAEVSRLQNELAESHAEREELESRAQALTDRLSQSLDPSLCVPL
RPDRDLRRKMRDGREREARQALLIHKLQNKVVEYRDRCQGLEYQVKTGERELLKRERRIR
DEHSDSLESALIRLEEEQQRSVGLAELNSLLRGQLSQSGQANEALSEDLCKLTTDWSKAV
EEAGLREMEWQKEKERLTGHVDRGQSRLMSMWGDVVTLRRHCHTVKTATDRDLWELRAEF
SRLSSSLLSHCGSVVSLSLRPSDPTTSLHPAPRSASAPPHSSTLGPPPLSSTLGPLSLQD
LDHDQKEREREREESERELTELRALYEAETLHLNNRISELSRTIQDQKIERQEEERKMER
GMASEKKEEREKERQTNTERTLECVYQAVLKLSKVLSSQSLDGQSSSSHTLSLSSDWLGP
DLLTTGLTQVLAVLAQAETNLLWRHQEAQEAAASLRRLGEERAGLEQRVRQLETDTEERQ
KQSLYEEQELTHIQDMLLSEREMVGSLRSQLEEEERQSEERRKENDRLRLEREREEEQRN
ELESERQRRLEADLVENAHLSEREACIRMELHVLQGALQREQLDRERAEEEAADARDALS
KARESVLTLSSGQTLLKREVSEHRDALEKMAALNEALAKDKRELNAQALQLEMEMADLQV
QLQGLESKVVTLRRELHTQSNESTELRTRRRSELSSLQQLRDRERELEREVETLRQEKER
EVETLREEKEREVETLREEKEREVETLREEKEREVETLREERGRVGKRLEELSVQHGAVC
GELRGLQAELCQATEQQRRAERETEELLRENQDVAGTVLSLERERDQLGQDIEELRILTV
SQQHQLTQTQQQVSGLEVESRQLQIQVTTLLQTKDVMQGEVQCLRGEMERGRSQTEKEKQ
EEREERERSQREREVWQADLERLQLLLDQTTEKGTRQEEERREEREGWQRERMALSSELG
HRDGEVVAMRNRMEGLEKEKEEMSCLLEERDAELERLTTEHKSHQHRERKLKEEGERWRE
RRAEEREREYERLSQRLTEKENNNSEQLKAVKRESDKIAEQLKKEEVDGRKRLKTIEELK
TRMISLEEERDNLEAELKKTELLENKMFAVERENSQLRERERERYQEESLRKRRNESEGR
ERLEEIEELKTRIISLEEERDNLEREMVEMSQRFKETENKESEQLKDRRREMEKVAEVLR
TREGEMRKREEEMTELKAMVISLEEELKDIEILKGNLQALEEVNTKLRDKEIEEERKMEK
REAEESERAERLKEELAQKDVEVQEVKNRMEGLEKEKEEMSCLLEERDAELERLTAEHKS
HQHSERKLKEEGERWRERKAEERERENVRLNQRLTEKEKNNSEQLKTVKRESDKIAEQLK
KEEVDGRKRLKTIEELKTRMISLEEERDNLEAELKKTELLENKMFAVERENSQLRERERE
IYQESLRKRRKESEGREREERLRGKLELREGEVEVLRVKLIVLEEERDEGKREQQTLEGK
MERQMAQLREREEEVEKLREEEEKAGARLQQREEELRNLNDRMHQSELSEKHVSDLLIET
ESLLETERSQSRDRDKALHLAKEEREREREQAQETEQHNVRLEEEVKKWKERVEERIKEV
ARLSQLLKEREEEDFRVRAVESGGERQRQKEELKRGEEERERQENVLRRNKEEREWLGAQ
LKEEQTEGERLRSRLEEVQRGQRLLQEDRGCRVERLGAQVKALEEERDHLLAEIRKKERE
AGILKDETHRERREKERTGSSLRRMEEELKESREALALSLATLKEQGAEMTRSRERSRKE
VQEKEGDNQKMREGLKTAMQEMATLNQLLEESHREGERLRSLLQERKEEMVKSREESLRA
ARGEVEELRGRTRAVEQEKREVERKLRDREEEMEEAVRENDRRQKEMEEVLGEKEAELTT
TRARLDVLEEQRTELRCLAAEKAVTQLRERIRVVEGEMEGVREEKKSEIERLQRKMETLR
QEEEERRESLKLREQESLRRVELVTDMLRERETELERVREKAYREEKDKLEERKRDTEEV
NLQSLEKEETDEQRRLIEPGEQREATDQKRGERSREGPGREVWLQDEVDTLRKRVSSQLL
DTEERERLLRQREEEGQESLRLLRQRETELYTLRERVEELGKDRDRVTAALEKTEATMIG
YRDRAHQQEQSRGAGSERAVAQLEMDPLVQERLSVLQRAVAQLEIDHRRLQRRNTQLEQR
TDRLKTERKHLREMLTQTERGSSRDELSSSSLRDRAQESRGLVGLETEELGLLRTKVKEL
EDQVHYLQLTLVLDHRERVEFIQHSSRNNQWLVSLRQDLTDSLVLVSQQPIPSVLESETH
RLDMSVREEEMRLSLSQS
NT seq
7077 nt
NT seq
+upstream
nt +downstream
nt
atggagacggcgctgttggatggctggaaggaggagagggcggagctgagggcggaggtg
tctcgcctgcagaatgagctggctgagagtcatgctgagagagaggagctggagtcacgt
gcccaggccctcacagaccggctgtcccagtccctggacccgtccctgtgtgtgcctctg
cgcccggacagggacttgagaaggaagatgcgagatggcagagagagggaggcccggcag
gctctactcatccacaaactgcagaacaaggtggttgaataccgggatcgctgccagggt
ttggaataccaggtgaagactggagaaagagagctcctgaaacgtgagaggaggatcagg
gatgagcacagtgactccttagagagcgccctcatcaggctggaggaagaacagcagagg
agtgtagggctggcagagctgaactctctccttcgtggccagctcagccaatcaggccag
gcaaatgaagcactgagcgaggacctttgcaaactgactaccgattggtccaaagcggtg
gaggaggcgggactgagggagatggagtggcagaaagagaaagagcgactgaccggtcat
gtcgaccgggggcagagtcgtctgatgtccatgtggggagatgtggtcactctgagacga
cactgtcacactgtgaagactgccactgacagggacctctgggagcttagagctgagttc
tctcgtctgtcttcctctctcctctcccactgtggttcagtggtgtctctatctctacgg
cccagtgaccctacaaccagcctccatcctgctccccgctctgcctccgccccaccccac
tcctccaccctaggcccacctcctctctcctccaccctaggccctctctccttgcaggat
ctggaccacgaccagaaggagagagagcgggagagagaggagagcgagagggagctgaca
gagctcagagccctctatgaagctgagaccctgcatctgaataacaggatctcagagtta
tctcgtaccattcaggatcaaaagatagaacgacaggaggaggagaggaagatggagcga
gggatggcttcggagaagaaagaggagagagaaaaggagagacagacaaacacagagaga
actctagagtgtgtctatcaggccgtcctaaaactgtccaaggtgctgagctcccagagt
ctggatggacagagtagcagtagccatactctgtctctgtccagtgattggttaggacca
gacctgttgactacagggctaacccaggtgctggctgtattggcccaggctgagaccaac
ctgctgtggcggcatcaggaagcacaggaggctgcggctagcctgcggaggctgggtgag
gagagagcaggactggaacagagagtcagacagctggagacggacacagaggagaggcag
aaacagagcctgtatgaagaacaggagctcactcatattcaggacatgttactcagtgag
agagagatggtgggctccctgaggagtcagttggaggaagaagagagacagagtgaggag
aggaggaaggagaacgatcgactgagactggagagagagagggaggaggagcagaggaac
gagctggagagcgagaggcagagacggttggaggcggacctggtagagaatgcccatctc
agtgagcgtgaggcttgtatccgcatggagctgcatgttctacagggagcgctgcagaga
gaacagctggacagggagagggcagaggaggaagctgctgatgctagggatgcgctaagc
aaggcccgtgagtcagtgttaaccctttcgtccggtcaaacccttctgaagagagaagtg
tcagagcaccgtgacgccctagagaagatggctgccttaaacgaagccttagccaaggac
aagagagagctcaacgcccaggcactacagcttgagatggagatggctgacctccaggtc
cagctacagggactagagtcaaaggtcgtgacccttcgtagggagcttcacacccagtcc
aatgagagcacagagttaaggactcgtagaagatcagagctcagctccctgcagcagctc
agggacagagagagagagctggagagagaggtggagaccctacgacaggagaaggagaga
gaggtggagaccctacgagaggagaaggagagagaggtggagaccctacgagaggagaag
gagagagaggtggagaccctacgtgaggagaaggagagagaggtggagaccctacgggag
gagagaggaagggttggaaaacggctggaagagctgtctgtgcagcacggtgcagtgtgt
ggggagttgagaggtctgcaggcagagctgtgccaagcgacagagcagcagaggagggca
gagagagagactgaggaactactaagagagaaccaggatgtggcggggactgtcctctca
ctggagagagagcgagaccagctggggcaggacattgaggaactcaggatcctgacggtc
tcccagcagcaccagttaacccagacccagcagcaggtctcagggctggaggtagagagt
aggcagctacagatccaggtcaccactctgctccagaccaaggatgtgatgcagggggag
gtccagtgtctgaggggagagatggagagagggaggagccagacagagaaggagaaacag
gaggagcgagaggagagagagaggagccagagagagagggaggtctggcaagctgacctg
gaaaggctgcagttactgctagatcagacaacagagaaagggacaagacaagaggaggaa
cggagagaagagagggaaggatggcagagagagaggatggcgttgagctcggagctgggg
cacagagatggagaggtggtggcgatgaggaacaggatggagggattggagaaggagaag
gaggagatgtcgtgtctgttggaggagagagacgcagagctggagagactaaccacagaa
cacaagagccaccaacacagagagagaaaactgaaggaggagggggagagatggagagag
agaagagcagaggagagggagagagaatatgagagactgagtcagaggctcactgaaaaa
gagaataataacagtgaacaactaaaggctgtgaaaagagagagtgacaagatagcagaa
caactgaaaaaggaggaggtagatggaaggaagagattaaagactatagaggaactgaaa
actagaatgatctcactggaggaagaaagagacaatctggaggcagaactgaagaaaact
gaactattggagaacaaaatgtttgccgtggagagagagaactcacagctcagagagagg
gagagagaaagataccaagaggagagtctgagaaagaggaggaatgagtcagagggaagg
gagagattagaggagatagaggagctgaaaactagaataatctcactggaggaagaaaga
gacaatctggagagggaaatggtggaaatgagtcagaggtttaaagaaacagagaataaa
gagagtgaacaactgaaagacagaagaagagagatggagaaggtggcagaagttctgaga
acaagggaaggagagatgagaaagagagaggaggagatgacagagctgaaagccatggtc
atctctctggaggaagagttgaaggacattgagatattaaaggggaaccttcaggcttta
gaagaggtcaacaccaaactccgggacaaggagatagaggaagagaggaagatggaaaag
agagaagcagaagagagtgagagggcggagagattgaaagaagagctggcacagaaagac
gtggaggtacaggaggtgaagaacaggatggagggattggagaaggagaaggaggagatg
tcgtgtctgttggaggagagagacgcagagctggagagactaaccgcagaacacaagagc
caccaacacagcgagagaaaactgaaggaggagggggagagatggagagaaagaaaagca
gaggagagggagagagaaaatgtgagactgaatcagaggctcactgaaaaagagaagaat
aacagtgaacaactaaagactgtgaaaagagagagtgacaagatagcagaacaactgaaa
aaggaggaggtagatggaaggaagagattaaagactatagaggaactgaaaactagaatg
atctcactggaggaagaaagagacaatctggaggcagaactgaagaaaactgaactattg
gagaacaaaatgtttgccgtggagagagagaactcacagctcagagagagggagagagaa
atataccaagagagtctgagaaagaggaggaaggagtcggagggaagggagcgagaggag
agactgagaggaaagctggagctgagagaaggagaggttgaggtcttgagagtgaagttg
attgtcttagaagaagagagggatgaggggaagagagagcagcagacactagaggggaag
atggagagacagatggctcagctgagggaaagagaagaggaggtagagaaactgagggag
gaggaagagaaggccggggctaggctacagcagagagaggaagagttgagaaatctgaac
gacagaatgcaccagtcagagctctcagagaaacacgtctcagaccttctgatagagacg
gagtctttactagagaccgagaggagtcagagcagagacagggataaagcactacacctg
gccaaggaggagagggagagggagagagaacaggcacaggaaacagagcagcacaacgtg
agactggaagaggaggtgaagaaatggaaagaaagagtggaggaacggataaaagaagta
gcaaggctctcacagctcctgaaggagagagaggaggaggactttagggtgagagcggta
gagagcggtggagaaaggcagagacagaaggaggaactgaaaaggggtgaggaggagagg
gagagacaggagaacgtattgaggaggaacaaggaggagagggaatggttgggtgcccag
ctgaaagaggagcagacggagggagagagactgaggtccagactagaggaggtgcagaga
ggacaacgcctcctgcaggaggatagaggatgtcgtgtagagaggctgggggctcaggtt
aaagccctggaggaggagagagaccacctcttagctgagatcaggaagaaggagagagag
gctgggatcctgaaggatgagactcacagagagaggagagagaaggagaggactggctcc
tcactgagaaggatggaggaggagttgaaggagagcagggaggcgctggccctcagtctg
gccaccctgaaggagcagggagcagagatgaccaggagcagggagagaagcaggaaggag
gtgcaggagaaggagggggacaaccagaagatgagagaggggctgaagacagccatgcag
gagatggctaccctgaaccagctgctggaggagagccacagggagggggagaggctaagg
agcctcctgcaggagaggaaagaggagatggtgaagagcagggaggagagcctgcgtgct
gcccggggggaggtggaggagctgcgagggaggaccagggctgtggagcaagagaaaagg
gaggtggagagaaagctcagagacagagaggaggagatggaggaggcagtgagagagaat
gacaggagacagaaggagatggaggaggtgttgggagagaaggaggctgagctgaccacc
accagggctagactggatgtcctggaggaacagaggacagagctcagatgtctggctgct
gagaaggcagttacacagctcagagagagaatcagagtggtggagggagagatggaggga
gtgagagaagagaagaagagcgagattgagaggcttcagcggaagatggagacgttgaga
caggaagaggaggagaggagggagagtctgaaactaagggagcaggagagcctgaggcgt
gtagagttagtcacggacatgctgagagagagggagacggagctggagagggtgagagag
aaagcttacagagaggagaaagataaactggaggagaggaagagagacacagaggaagtg
aacctgcagagtctggagaaagaagagacagatgaacagaggagactgatagagcctggg
gaacaaagggaggcgacagaccagaagagaggagaaagaagtcgggagggtccaggaaga
gaggtctggcttcaggacgaggtagatactctgaggaagagagtgtcctcccagctcctg
gacacagaggaaagggagagactgttgagacagagagaagaggagggccaggagagtctt
agactgttgagacagagagagacagagctttacaccctgagagagagggtagaggaactc
ggtaaggacagagaccgtgtcacagctgccctggagaagactgaggctaccatgattggc
taccgggacagagcccaccaacaggagcaaagcagaggggcgggatctgagagggccgtg
gcccagctagagatggaccccctggtccaggaacgtctgtctgtcctgcagagggccgtg
gcccagctagagatagaccatagacggctacagaggaggaacacacaactggaacaacgc
actgacagactgaagactgagaggaaacacctcagagagatgctgacacagacggagaga
ggatcatcacgtgatgagttgtcctccagcagcctcagagacagagctcaggagtccagg
ggcttggttggtctggaaacagaggagttgggactccttaggaccaaggtgaaggagcta
gaggaccaggtacactacctacagctgacactcgtcctcgaccaccgggagagggtggag
tttatccaacactcctccaggaacaaccaatggctggtgtctcttcgccaagacttgact
gattctctggtgttggtctcgcagcaaccaatcccctctgtgctggagtcagagacacac
cgattggatatgagtgtcagggaggaggagatgagattgtctctcagtcagagttga
DBGET
integrated database retrieval system
