Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139405550
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Entry
139405550 CDS
T10872
Name
(RefSeq) X-ray repair cross-complementing protein 5
KO
K10885
ATP-dependent DNA helicase 2 subunit 2
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla03450
Non-homologous end-joining
Brite
DNA repair and recombination proteins [BR:
ocla03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA-PK complex
139405550
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NCBI-GeneID:
139405550
NCBI-ProteinID:
XP_071004068
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Position
3:complement(90353312..90386363)
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AA seq
713 aa
AA seq
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MARSAKTALVLCLDVGFSMSNSAPGQEPPFQQAKKVIQKFVQRQVFAENKDELGLVLFGS
DNTKNNLAKNDQYQNISVHRHLMIPNFELLEEIQNDVQPGSQQADWLDALVVCMDLLQNE
TLGKKYERLNIVMLTDLNTPSSPDQLDIIIGNLKRAGITLQFFLPFPVDGGGSNPPHGGK
ALSREQQQGLEMTKKVMMSLDEEDGLEEVYTFSDAIEKLSVFKRVEKRPMAWPCTLTIGS
SLSIKIVGYKAVCEERPRKSWSVVDAQTHQKDDIKRDVVYCLNDDEETEVQKDDTIQGYR
YGSDIVPFSKVDQDQMKYKTDGKSFAVLGFTKQSMINRHQFVGTQVLKVFAPKDDEHAGV
ALSGLIRALDDLKMVAVVRYVYARNGNPQVGAAFPCIKEKYECLVYVQLPFMEDLRQYSF
PSLENNKKYTPSEDQLSAVDSLIDSMMLVEEDGEKKDLFKVNHIPNPQYQRLFQCLHHRA
VNPSVPLPPMDPWLTTALQRPLAVATRCQAPLETLKKKFPLKEVVKKKELKTSKELFGNS
TEEPDAKKAKVDEEEDFNLADITEGSITQVGSVDPARDFRTLIRQKSLPFGEVCQQLTGR
IEQLLGNKNMNYYIKCIPCIQTFREQSVQVGNADHYNSYIQSLKTSIPVRGLQEFWDMLV
QDALTLINKDEVEGSTFSSHDAKQFLTAGEKKEEVVAAVVDDTGDVDDLLDMM
NT seq
2142 nt
NT seq
+upstream
nt +downstream
nt
atggcgcgttcagcgaagacagcgttggttctgtgtctggatgtgggtttctccatgtcc
aactctgccccgggacaggaaccgcccttccaacaggccaagaaagtcatccagaagttt
gttcagcgccaggtgtttgctgagaacaaagatgagctgggtctggtgctgtttgggtca
gacaacactaagaacaacctagctaaaaacgaccagtaccagaacatctcagtacaccgc
catctcatgatcccaaactttgagctgctggaagagatccagaatgatgtgcaacctggg
agtcaacaggctgactggctggatgctctagttgtatgcatggacctgcttcagaacgaa
actctggggaagaaatatgagcgtctgaacatcgtcatgctcacagacctgaacacaccg
agcagtcctgaccagctggacattatcataggcaacctgaagagagccggcatcactctg
cagttcttcctacccttccctgtagatggagggggttccaaccccccccacgggggtaaa
gctctgtccagagagcagcagcaggggctggagatgaccaagaaggtcatgatgtctctg
gatgaggaggatggtctggaggaagtctacaccttcagtgatgctatagagaagttgtct
gtgtttaaacgtgttgagaagagacccatggcctggccctgtactctgaccatcggcagc
tctctgtccatcaagattgttggctacaaagcagtatgtgaggagagacccaggaagtcg
tggtcggtggtagatgctcagacacaccagaaagacgacataaaaagagatgtagtttac
tgtctgaacgatgacgaagagaccgaggtacagaaggacgacaccatacaagggtatcgt
tatggcagtgacatcgtccccttctccaaagttgaccaggaccagatgaagtacaagaca
gatgggaagagttttgctgtgctgggcttcaccaaacagagcatgatcaacagacaccag
ttcgtggggactcaggtcctcaaggtgtttgcccctaaagatgatgagcatgcaggtgta
gctctctcaggtctgatccgtgctctggatgacctcaagatggtggcggtggtgaggtat
gtttacgcccgcaatggaaacccacaagtaggagcagccttcccctgtattaaggagaag
tatgagtgtctggtgtatgttcagcttccgttcatggaagatctcaggcagtacagcttc
ccttctctggagaacaacaagaagtacactccctcagaggaccagctgtcggcggtggac
tctctgattgactccatgatgttggtggaggaggatggagagaaaaaagacctcttcaaa
gtcaaccacatccccaaccctcagtaccagagactgttccagtgcctgcaccatcgggcg
gtgaaccccagtgtccccctcccccccatggacccctggctgactacagctctccagcgc
cccctggcggtggccacccgctgtcaagcccccctggagacactgaagaagaagttccct
ctgaaggaggtggtcaagaagaaggaactgaagaccagcaaggagctgtttgggaacagc
actgaggagcctgatgccaagaaggccaaagttgacgaggaggaagactttaacctggct
gacatcacagagggaagcatcacacaggtgggcagtgtagatccagcacgggatttccgc
actctgattcgccagaagagtcttccgtttggagaggtgtgtcaacagctgactggcagg
atagagcagttgcttggcaacaagaacatgaactactacataaagtgcatcccctgtatc
cagaccttcagagagcagtctgttcaggttgggaatgctgatcactacaacagctacatc
cagtctctgaagaccagtattcctgttagaggccttcaggaattctgggacatgctagtc
caagatgccctgaccctaatcaacaaggacgaagttgaagggagcacgttctcgagtcat
gatgccaagcagttcctgactgcaggggagaagaaagaggaggtagtagcagctgtggtg
gacgatacaggagatgtggacgacttgctggacatgatgtga
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