Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139405628
Help
Entry
139405628 CDS
T10872
Name
(RefSeq) E3 SUMO-protein ligase NSE2-like
KO
K22756
E3 SUMO-protein ligase NSE2 [EC:2.3.2.-]
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ocla04121
]
139405628
03400 DNA repair and recombination proteins [BR:
ocla03400
]
139405628
Ubiquitin system [BR:
ocla04121
]
Ubiquitin ligases (E3)
UBL E3 ligases
139405628
DNA repair and recombination proteins [BR:
ocla03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
SMC5-SMC6 complex
139405628
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-Nse
zf-RING_UBOX
zf-MIZ
Phage_pRha
Motif
Other DBs
NCBI-GeneID:
139405628
NCBI-ProteinID:
XP_071004141
LinkDB
All DBs
Position
3:complement(2035433..2049386)
Genome browser
AA seq
224 aa
AA seq
DB search
MSLSAVHSTLSSLKTCQADIGTGMDIVTDVALDVAETAGTENDAVLKKLEVMMLECAKLD
QEINCFVEVVNCVTAEVRNQEPEAMFRLKSLVKEKFTERHGSLSEGELQNHVKLVSFKEN
VRNALKTVNPEAAENMEEELDEDVAVTQSEVNFTCPLTQVEMVNPMKNKKCNHHYDRDAI
MGMIKARQNQKKKLRCPVVGCGNTDVKQGDLILDQIMKRQIQKR
NT seq
675 nt
NT seq
+upstream
nt +downstream
nt
atgtccttgagtgcagtccactccacactgtctagtctgaaaacatgtcaggcagatatt
ggaacggggatggacattgtgaccgacgtcgctctggacgtggcagaaacagcaggaact
gagaatgatgcagtcctgaagaagctggaggtgatgatgctggagtgtgccaaactggac
caggagatcaactgcttcgttgaggtggtgaactgtgtcactgcagaggtgaggaaccaa
gagcccgaggccatgttcagactgaagtctctggtgaaggagaagttcactgagagacac
ggcagtctgtctgagggagagctacagaaccacgtcaagctggtcagctttaaggagaac
gtcagaaacgcactcaaaacagtgaaccctgaggcagcagagaatatggaggaggagctg
gatgaggatgttgctgtgacgcagagtgaggttaacttcacctgtcccctgactcaggtg
gagatggttaacccaatgaagaacaagaagtgtaaccaccactacgaccgggacgccatt
atggggatgatcaaggccaggcaaaaccagaagaagaagttacgctgtccggtggttggc
tgtggcaacacggacgtgaagcagggagacctgatcctagatcagattatgaagagacag
atccagaagaggtag
DBGET
integrated database retrieval system
