Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139405650
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Entry
139405650 CDS
T10872
Name
(RefSeq) ataxin-1-like
KO
K23616
ataxin-1
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
139405650
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Motif
Pfam:
ATXN-1_C
AXH
Motif
Other DBs
NCBI-GeneID:
139405650
NCBI-ProteinID:
XP_071004168
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Position
3:complement(4683814..4696287)
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AA seq
922 aa
AA seq
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MKSNQERSHGCLPPKKREILALEQRPVVVPAAAEILALEQRPVVVPAAAAASADTTLHTE
NLTWLANVASERCRSTETPSPRFPVSSSSSSSPSPSALPLSSLSTIYPTGVGLSQQGGTI
QYAQLAPNLQFISSGPYTGYISSQIIQSTATSVAASTGQQRHHLDGHCYTTALISQATKV
GDQQNKVQIGLPSDLAVSVGGTHFTTTHQYIQLDSSSPLTVTSPTQGHLQPLQLHTHPGV
GLLPHTLTLAPSQVLVQYTDGLGVNKAEGGHTKVVQLNGELERSFGKQSCAGIKGTSYSN
QNNQQVHHGYEARHILIPADYTTQDSTGLQTSLVLVANAQPNPHPHPHPTSGAEQDKVQV
HPSLIHSEGGGICLRKPVSRTSSFTSSEALKVSSAPHTVIQTTHHSDEHVHSLYSTTQAP
IIGYIARAGNQHGVSYATLPQHLVIPDGQSLQSLLIPVNGVTTTTDLEAACSVTARTAST
TASQLAPATASLPRHTYLTASLSKCEMLGSDGHHQSPAVLQAQVLPIQHIQIPSNTPANV
VASPSPAPALAPGPVQASPSLSSSPSPVPALAPGPVQASPSLSSSPTTLPPFFMRGSIIQ
LADGELKRVEDLKTEDFIQSAEISSELKIDSSTVERIDTGQTPNAVIIQFGVGEHKAQVC
VEVLLEYPFFVFGQGWSSCCPGRTTQLLELSCAKLCVGDVCVSLTLRSLRGGGGSVSGRN
HNSQGHEVKLRHSHNTGDITQGSNRQGNSQGNSQSNGQRDSQSMDKDFRNSLNAAGSNSV
FLVQVAKTDRLNEEDWDVPRCVDQVTGSGLRPGSGPGVYGTGVGPRSTSDLQAVSGNGEM
IGRDNGETREREQNSPMLPPPLKTEVGEADKEKPWGRKRRWSAPERDQTERADEEPPLTL
PKPSFITQQVKLSIEGRSNVSR
NT seq
2769 nt
NT seq
+upstream
nt +downstream
nt
atgaaatccaaccaggagaggagccatggctgtctacctccaaagaagcgtgagatccta
gccctggagcagaggcctgtggtggtaccagcagcagctgagatcctagccctggagcag
aggcctgtggtggtaccagcagcagctgcagcctcagcagacactaccttgcacacagag
aacctgacttggctggccaatgtagccagcgaacgctgcagatccacagaaactcccagc
cccaggtttcctgtctcctcgtcctcctcttcatctccctccccttctgctctccccctg
tcctctctctccacgatctaccccactggggtggggctcagccaacagggcgggacaatc
cagtacgcccagctggcccctaacctccagttcattagctcggggccgtacactggctac
atctcctctcagatcatccagtccactgccaccagtgtagccgcctccacagggcaacag
cgccaccatctggacggccactgctacaccaccgccctcatctcccaggccaccaaggtt
ggggaccagcagaacaaggtccagataggtctgccgtctgacctggctgtgtccgttgga
gggacccacttcaccactacccaccagtacatccagctggacagcagcagccctctgacc
gtcacctcccctacccagggccacctccagcctctccagctccacacccaccctggggtg
ggcctcctcccccacaccctcaccctcgccccctcccaggtgctggtccagtatacggat
gggttaggggtcaacaaagctgagggcggacacaccaaggtggtgcagctgaatggagag
ctggagaggagtttcggtaaacagagctgtgctggcatcaaaggaacctcctactctaac
cagaacaatcagcaggttcaccatggatatgaagctcgacacatcctcattcccgcagac
tacactacccaggattccacaggactacaaacctccctggtgctggtagcaaacgcccag
cccaacccccacccccaccctcaccctaccagtggtgctgagcaggacaaggtccaggtc
cacccatcactaatacacagtgagggaggaggcatctgtctaaggaaacctgtctccaga
acctcctctttcacctcctctgaggctctgaaggtctcttctgcccctcacacggttatc
cagaccacccaccactctgacgagcatgtacacagcctgtactccaccacccaggcacca
atcatcggctacatcgccagggcaggtaaccagcatggcgtcagctacgccaccctgccg
cagcacctggtcatcccggacggccagtccctccagtctctcctgatacccgttaacgga
gttaccaccactacggacctcgaggctgcctgctcggtgaccgccaggacggccagcacc
actgcctctcagctggctccagcgaccgcatccctcccccgccacacctacctcaccgcg
tccctgtccaagtgtgagatgctggggtcggacggccaccaccagtcccctgctgtactc
caggcccaagtactacccatccaacacatccaaatcccgtctaacacacctgctaatgtg
gtggcgtccccctcccctgccccagccctagctccaggacctgtccaggcctccccctct
ctctcctcttccccctcccctgtcccagccctagctccaggacctgtccaggcctccccc
tctctctcctcctctccaaccacgctccctccgttcttcatgcgtggctccatcatccag
ctggcggacggggagctgaagcgagtggaggacctgaagacggaggactttatccagagt
gctgagatcagcagtgagctgaagattgactccagcacagtggaacgcatcgacacgggc
cagacacccaacgctgtcatcatacagttcggtgtcggggaacacaaagcacaggtgtgt
gtggaggtgctgttagagtacccgttctttgtgttcggccagggctggtcgtcctgctgc
cctggccggaccactcagctgttggagctgagctgtgccaagctgtgtgttggggacgtg
tgtgtctccctgaccctcaggagcctgaggggtggcggtggctctgtgtctgggaggaac
cacaacagccagggtcacgaggtcaagctgaggcacagccacaacactggggacatcaca
caggggtctaaccgccaggggaacagtcaggggaatagccagagtaatggtcagagagac
agtcagagtatggacaaagactttaggaacagtttgaatgctgcaggcagcaacagtgtc
ttcctggtgcaagtggccaaaacagacaggttgaatgaggaggactgggacgtcccccgc
tgtgtggaccaggtgacaggatctggactgagacccggatctggaccaggggtctacgga
actggagttggacccaggagcacctcggacctgcaggctgtctcagggaatggagagatg
atagggagagacaatggagagacgagagagagagaacagaatagccccatgctccctccg
cccctcaagacagaagtgggtgaggcagacaaagaaaaaccctggggtcgtaagaggagg
tggtctgctccagagagagatcagacagagagggcggacgaggaaccccctttgactctg
ccaaaaccctcttttataactcagcaggtcaaactctccatcgagggaaggtcaaatgtt
agtcgttga
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