KEGG   Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139405744
Entry
139405744         CDS       T10872                                 
Name
(RefSeq) glutamate-rich WD repeat-containing protein 1-like
  KO
K14848  ribosome assembly protein RRB1
Organism
ocla  Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Brite
KEGG Orthology (KO) [BR:ocla00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:ocla03009]
    139405744
Ribosome biogenesis [BR:ocla03009]
 Eukaryotic type
  Pre-60S particles
   Other pre-60S particles
    139405744
SSDB
Motif
Pfam: Beta-prop_THOC3 Beta-prop_WDR5 WD40_CDC20-Fz WD40 Beta-prop_WDR3_1st Beta-prop_IFT122_1st WD40_Prp19 DSE1_N Beta-prop_RIG_2nd WDR55 Beta-prop_EML_2 WD40_WDHD1_1st WD40_Gbeta Beta-prop_EIPR1 Beta-prop_CAF1B_HIR1 CAF1C_H4-bd Beta-prop_Aladin Beta-prop_WDR3_2nd EIF3I Beta-prop_EML Beta-prop_TEP1_2nd Beta-prop_WDR36-Utp21_2nd Beta-prop_WDR36-Utp21_1st ANAPC4_WD40 Beta-prop_NOL10_N Beta-prop_SPT8 WD40_MABP1-WDR62_2nd Beta-prop_IFT140_1st Beta-prop_WDR19_1st ASA1 Beta-prop_WDR35_TULP_N Beta-prop_SCAP Beta-prop_WDR90_POC16_2nd PAC11 Beta-prop_HPS5 WD40_RFWD3 eIF2A MIOS_WD40 Beta-prop_WDR75_1st Beta-prop_VPS8 DUF7160
Other DBs
NCBI-GeneID: 139405744
NCBI-ProteinID: XP_071004267
LinkDB
Position
3:complement(14832738..14839575)
AA seq 451 aa
MSAPREDMLPNEDGEVDEMEGGGSDEDEMEEEGKDGEQETQVYVPGKQPLQPGEELEMDR
SAYRMYHECQTGAPCLSFDVLRDANGDGREQYPLSMLLCAGTQADAALSNRLLLIRMHNL
HGTTEKVKEGDESSDGESDEEDDDEDKKPQMELAMMPHYGGINRVRVTHRGDQSLAAVWS
EKGQVEIFDLRSQMEAVYSSAAMSTFVKQQKEATPLFSFSGHMTEGFAIDWSPKVPGRLV
SGDCKKNIHVWEPQEGGTSWQIDQRPFSSHTKSVEDLQWSPTEATVFASCSVDQSIRVWD
TRAPPNSMLCAKEAHSSDVNVISWNRTEPFLLSGGDDGLLKVWDLRQFQSGRPVANFKQH
SAPVTSVEWNPVDSSVFAASGADDVVSQWDLSVESSDVGAREEGVKDLPPQLLFLHQGQT
EVKEIHWHPQIPGVMVSTALSGFNVFRTISV
NT seq 1356 nt   +upstreamnt  +downstreamnt
atgtcggcgcccagagaagacatgcttccgaacgaagatggagaggtggatgaaatggaa
gggggtggcagcgacgaagacgaaatggaagaagagggaaaggacggagaacaggaaact
caagtttatgtccccggaaaacagcctctccaacccggagaggagctcgagatggaccgc
tcggcttaccgcatgtaccacgagtgtcagacaggtgctccttgcctgagcttcgacgtg
ttgagagatgcgaatggagacggcagggaacagtatcccctctctatgctgctctgtgca
ggcacccaggctgacgctgccctcagcaacagactgcttctcatacgcatgcacaacctc
cacggtactacagagaaagtgaaggagggggacgagagcagtgatggagagagtgatgaa
gaggatgatgatgaagataagaagccacagatggagttggccatgatgcctcactatgga
gggatcaacagagtccgagtgacccatcgtggagatcagtcattggctgctgtctggtca
gagaaaggtcaggtggagatatttgacctccgatcccagatggaagccgtctacagttca
gctgccatgtcaaccttcgtcaaacagcagaaggaagccacgcccctcttcagtttctcg
ggtcacatgactgagggctttgccattgattggtcgcccaaagtacccggtcggctggtc
agtggcgactgcaaaaagaacatccacgtgtgggaaccacaggagggagggacttcctgg
cagatcgaccaacggcctttcagttctcacaccaagtctgtggaggacctgcagtggtca
cccacagaagccactgtttttgcgtcctgctctgtggatcagtccatccgggtctgggac
accagagccccgcctaactccatgctctgtgccaaggaggcacactcctcagacgtcaac
gtcatcagttggaacaggactgaaccattcctgctgtctggcggggacgacggacttctg
aaagtttgggacttgaggcagttccagtcgggccggccggtggctaacttcaagcagcac
agcgcgccagtgacatcagtagaatggaaccctgtggactccagcgtgttcgccgcctct
ggagcggacgacgtggtcagccaatgggacctatcagtagagtcaagtgatgtgggtgcg
agggaggagggggtgaaggacctgcccccccagctgctgttcctgcaccagggtcagaca
gaggtcaaggaaatccattggcacccgcagatacccggggtgatggtctctactgctctg
tcaggcttcaacgtgttcaggaccatctctgtatag

DBGET integrated database retrieval system