Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139405744
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Entry
139405744 CDS
T10872
Name
(RefSeq) glutamate-rich WD repeat-containing protein 1-like
KO
K14848
ribosome assembly protein RRB1
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ocla03009
]
139405744
Ribosome biogenesis [BR:
ocla03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
139405744
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_CDC20-Fz
WD40
WD40_Prp19
Beta-prop_RIG_2nd
Beta-prop_EML_2
WDR55
WD40_WDHD1_1st
Beta-prop_EIPR1
Beta-prop_CAF1B_HIR1
CAF1C_H4-bd
EIF3I
Beta-prop_EML
Beta-prop_TEP1_2nd
ANAPC4_WD40
WD40_MABP1-WDR62_2nd
Beta-prop_SPT8
Beta-prop_IFT140_1st
Beta-prop_WDR19_1st
Beta-prop_WDR35_TULP_N
Beta-prop_WDR90_POC16_2nd
Beta-prop_SCAP
Beta-prop_HPS5
WD40_RFWD3
eIF2A
Beta-prop_TEP1_C
MIOS_WD40
Beta-prop_WDR75_1st
WDR90_beta-prop_4th
DUF7160
Motif
Other DBs
NCBI-GeneID:
139405744
NCBI-ProteinID:
XP_071004267
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Position
3:complement(14832738..14839575)
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AA seq
451 aa
AA seq
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MSAPREDMLPNEDGEVDEMEGGGSDEDEMEEEGKDGEQETQVYVPGKQPLQPGEELEMDR
SAYRMYHECQTGAPCLSFDVLRDANGDGREQYPLSMLLCAGTQADAALSNRLLLIRMHNL
HGTTEKVKEGDESSDGESDEEDDDEDKKPQMELAMMPHYGGINRVRVTHRGDQSLAAVWS
EKGQVEIFDLRSQMEAVYSSAAMSTFVKQQKEATPLFSFSGHMTEGFAIDWSPKVPGRLV
SGDCKKNIHVWEPQEGGTSWQIDQRPFSSHTKSVEDLQWSPTEATVFASCSVDQSIRVWD
TRAPPNSMLCAKEAHSSDVNVISWNRTEPFLLSGGDDGLLKVWDLRQFQSGRPVANFKQH
SAPVTSVEWNPVDSSVFAASGADDVVSQWDLSVESSDVGAREEGVKDLPPQLLFLHQGQT
EVKEIHWHPQIPGVMVSTALSGFNVFRTISV
NT seq
1356 nt
NT seq
+upstream
nt +downstream
nt
atgtcggcgcccagagaagacatgcttccgaacgaagatggagaggtggatgaaatggaa
gggggtggcagcgacgaagacgaaatggaagaagagggaaaggacggagaacaggaaact
caagtttatgtccccggaaaacagcctctccaacccggagaggagctcgagatggaccgc
tcggcttaccgcatgtaccacgagtgtcagacaggtgctccttgcctgagcttcgacgtg
ttgagagatgcgaatggagacggcagggaacagtatcccctctctatgctgctctgtgca
ggcacccaggctgacgctgccctcagcaacagactgcttctcatacgcatgcacaacctc
cacggtactacagagaaagtgaaggagggggacgagagcagtgatggagagagtgatgaa
gaggatgatgatgaagataagaagccacagatggagttggccatgatgcctcactatgga
gggatcaacagagtccgagtgacccatcgtggagatcagtcattggctgctgtctggtca
gagaaaggtcaggtggagatatttgacctccgatcccagatggaagccgtctacagttca
gctgccatgtcaaccttcgtcaaacagcagaaggaagccacgcccctcttcagtttctcg
ggtcacatgactgagggctttgccattgattggtcgcccaaagtacccggtcggctggtc
agtggcgactgcaaaaagaacatccacgtgtgggaaccacaggagggagggacttcctgg
cagatcgaccaacggcctttcagttctcacaccaagtctgtggaggacctgcagtggtca
cccacagaagccactgtttttgcgtcctgctctgtggatcagtccatccgggtctgggac
accagagccccgcctaactccatgctctgtgccaaggaggcacactcctcagacgtcaac
gtcatcagttggaacaggactgaaccattcctgctgtctggcggggacgacggacttctg
aaagtttgggacttgaggcagttccagtcgggccggccggtggctaacttcaagcagcac
agcgcgccagtgacatcagtagaatggaaccctgtggactccagcgtgttcgccgcctct
ggagcggacgacgtggtcagccaatgggacctatcagtagagtcaagtgatgtgggtgcg
agggaggagggggtgaaggacctgcccccccagctgctgttcctgcaccagggtcagaca
gaggtcaaggaaatccattggcacccgcagatacccggggtgatggtctctactgctctg
tcaggcttcaacgtgttcaggaccatctctgtatag
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