Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139405813
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Entry
139405813 CDS
T10872
Name
(RefSeq) collagen triple helix repeat-containing protein 1-like
KO
K25700
collagen triple helix repeat-containing protein 1
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
ocla03037
]
139405813
Cilium and associated proteins [BR:
ocla03037
]
Other cilia and associated proteins
Stereociliary proteins
139405813
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Paralog
Gene cluster
GFIT
Motif
Pfam:
CTHRC1_C
Collagen
Motif
Other DBs
NCBI-GeneID:
139405813
NCBI-ProteinID:
XP_071004345
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All DBs
Position
3:20403947..20412840
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AA seq
229 aa
AA seq
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MVSALTRLLLLTCVILPFNGAEKLRKALDRKDVEYEKYNSCPRGPAGTPGREGNPGTNGI
PGTPGIPGRDGIKGEKGECVSEVFEEPWKPNYKQCAWNSLNYGIDLGKIADCTFTKLRSD
SALRVLFSGSLRLKCKTACCQRWYFTFNGAECTGPLPIEFIIYLDQGSPELNSTINIHRT
SSVEGLCEGIRAGLVDVAIWVGTCADYPRGDASTGWNSVSRVFIEELPK
NT seq
690 nt
NT seq
+upstream
nt +downstream
nt
atggtatcagctctaactcgtctgctgctcctcacctgcgtgattctacctttcaatgga
gcagagaaattgagaaaggcacttgacaggaaggatgttgaatacgaaaagtacaacagc
tgcccccggggtccggctggcacccctggaagggagggtaaccctggcaccaatggcatc
cctgggactcctggcatcccggggcgcgatggcatcaagggggagaaaggagagtgtgtg
agtgaggtgtttgaggagccctggaaacccaactacaagcagtgtgcctggaactcactc
aactatgggatcgacttgggcaagatagctgactgtacattcaccaagctgcgttcagac
agtgccctgcgtgtgctcttcagcggctccctgaggctgaagtgtaagacagcctgctgc
cagcgttggtacttcaccttcaacggagctgagtgtacaggacctctgcccatcgagttc
atcatctaccttgaccaaggcagccctgagctcaactccaccatcaacatacacagaacc
tcatctgttgaagggttgtgtgaggggatccgggcaggcctggtggacgtggctatctgg
gtggggacctgtgctgactaccccagaggagacgcatctacagggtggaactctgtatcc
agggtcttcatagaggagctgcccaaatga
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