Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139405870
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Entry
139405870 CDS
T10872
Name
(RefSeq) PR domain zinc finger protein 1-like
KO
K24501
PR domain zinc finger protein 1 [EC:2.1.1.-]
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ocla03000
]
139405870
Transcription factors [BR:
ocla03000
]
Eukaryotic type
Zinc finger
Cys2His2 PRDM
139405870
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GFIT
Motif
Pfam:
PRDM2_PR
zf-H2C2_2
zf-C2H2
SET
zf-C2H2_4
Zf-C2H2_ZNF451_C
zf-C2H2_6
C2CH-3rd_BIRD-IDD
zf-C2H2_jaz
zf-met
zf-C2HE
Motif
Other DBs
NCBI-GeneID:
139405870
NCBI-ProteinID:
XP_071004409
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All DBs
Position
3:complement(27413658..27424319)
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AA seq
832 aa
AA seq
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MCGWDQSFSATSHSSAMLTTEGAHTVEHDNVKMDTEPHRDTETQMDTRSKMATDTDSKME
EADMMKWTEVEFEEKCTYIVKDTPREAGTESKGLTRAEASLPRNLAFKQLADSKEVIGVA
SREYIPKGTRFGPLVGQSYTADSVPKDANRKYFWRIYSEGDFHHFVDGLDEERSNWMRYV
NPAHSAGEQNLAACQNGTSIYFYTVRAIPPGTELLVWYCPEFAHRLHPPSEELMMQKLKQ
SLLEAKQQASEEHVSSSSAPVKIEHSVSSILGGPTTSSKKEPSRPLATRPRCADSPDRPL
YPRALYPPFRPHPHLTEEFLSLKTSPVQFCYTAIRSPGNQSSATPSPSARSSPESSPDGS
PAAPQPTHQSTSFYSRGLGPFPGYSPPAAPLSSPFYPPGPHYSRYMLPHHYPLPGGGVPA
VGGMFPRMYPLFSSLLPPNMPLLPGEAGSRFLLPNSSHPSFSTHRDFLLSATTSAFSAAT
TLRDKAGPHYPHHPYSGHDHPHPHGHPHAPTSGSPTAGTAAPSEHMPTKPTSALLGSASG
RQEEAINLSKMKRGGGSTGYKTLPYPLKKQNGKIKYECNVCSKTFGQLSNLKVHLRVHSG
ERPFKCSTCTKGFTQLAHLQKHFLVHTGEKPHECSVCHKRFSSTSNLKTHLRLHSGEKPY
SCKLCPAKFTQFVHLKLHKRLHSRERPHKCPHCHRHYIHLCSLQLHLKGYCLAAVTSSGG
PTPSPSTQEELQRINEEIERFDMSDHAERLDQLQGGVEVEAVLEKQVLGMLWREMDLKTS
GYHHHKGGASELQSTGYGLYNSVNETSVIKLRRSSPLLPSNVTIKQESEEQA
NT seq
2499 nt
NT seq
+upstream
nt +downstream
nt
atgtgtggctgggaccaaagcttctcggctacctctcatagctcggccatgttgactact
gagggggcccacactgtagagcacgacaacgtcaagatggacaccgaaccccatagggac
acggaaacccagatggacacgagatccaaaatggccaccgacacagactctaagatggag
gaggcggacatgatgaagtggacggaggtggagtttgaggagaagtgtacctacatcgtc
aaggatactccacgggaggcagggacagagagcaaggggttaacgagagcagaggcctca
ctgcctcgtaacctggccttcaaacaactagctgattccaaagaggtgattggagtggcc
agcagagagtacatccccaaaggaacacgcttcggccccctggtgggtcagagctacact
gcagacagcgtccccaaagacgccaacaggaagtacttctggaggatctactcggagggc
gacttccaccactttgtggacggcctggacgaggagcggtctaactggatgcgctacgtc
aacccggcccactcggcgggggagcaaaacctggcggcgtgccagaatggcacgagcatc
tacttctacacggtgagggccatcccccctggcaccgagctgctggtgtggtactgccca
gagttcgctcaccgcctccacccgccttctgaagagctcatgatgcagaaactcaagcag
tctctgctggaagccaagcagcaggccagtgaggagcatgtcagcagcagcagcgcccca
gtcaagatagaacacagtgtctcctccatcctcgggggccccaccacctctagcaagaag
gagcccagccggccactggccacgcgaccccgctgtgctgacagccccgatcggcccctg
tacccccgtgccctctaccccccattccgcccccaccctcatctaacggaagagttcctg
agccttaagaccagcccggtacagttttgttacacagcaatcagatcaccaggcaaccag
tcgtcggcgaccccgagtccgtcggcgcggagcagtccggagagtagccccgatggtagc
cccgcagctccccaacccacacaccaatccacctctttttactcccgaggtttgggtccc
ttcccaggctattctccaccagccgcccccctttcctcacccttctaccctcccggcccc
cactactcccgctacatgctaccccaccactacccactacctgggggtggggtgcccgct
gtcgggggaatgtttccaagaatgtaccctctcttcagcagcctgctgccccccaacatg
cccctgctgcctggggaggcggggagcaggttcttactacctaactcctcccacccctca
ttctccacccaccgggacttcctcctctccgccaccaccagtgccttctcagccgccacc
accctcagggacaaagccggcccccactacccccatcacccttactctggccatgatcat
cctcacccacacgggcacccccacgcccccaccagcggctcacctacagcgggcacggcg
gcccctagcgagcacatgcccaccaagcctacctcagccctgctgggcagtgccagcggc
cggcaggaggaggccataaacctgagcaagatgaagcgtggtggtggctctacaggctac
aagaccctgccttacccactcaagaagcagaacggcaagatcaagtacgagtgtaacgtc
tgcagcaagaccttcggccagctctctaacctcaaggtgcacttgcgtgtccacagcggt
gagcggcccttcaagtgttcgacctgcactaagggcttcacccagctggcccatctgcag
aaacacttcctggtgcacactggagagaagccccatgagtgctcggtgtgccataagcgc
ttcagcagcaccagcaacctaaagacccacctgcgcctccactcgggtgagaagccctac
tcgtgcaagctctgccctgccaagttcactcagtttgtccacctcaagctgcacaagcgc
cttcactcccgcgagcggccacacaagtgcccccactgccaccgccactacattcacctg
tgcagcctgcagctacacctgaagggctactgtctggctgccgtcacctcctcaggtggc
cccacccccagcccctccacccaggaagagctccagcgcatcaatgaggagattgagcgc
ttcgacatgagcgaccacgctgagaggctggaccagctccagggaggggttgaggttgag
gctgtcctggagaagcaggtcctggggatgctgtggagggagatggacctcaagacctcc
ggctaccaccaccacaagggcggcgccagtgagctccagtctacaggttacggcctctac
aattcagtcaatgagacgtcggttatcaaactgcgccgaagcagtccgcttcttccttcc
aacgtcacgatcaagcaggagtccgaggaacaggcttga
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