Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139405883
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Entry
139405883 CDS
T10872
Name
(RefSeq) RNA-binding protein 8A isoform X1
KO
K12876
RNA-binding protein 8A
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla03013
Nucleocytoplasmic transport
ocla03015
mRNA surveillance pathway
ocla03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
139405883
09122 Translation
03013 Nucleocytoplasmic transport
139405883
03015 mRNA surveillance pathway
139405883
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ocla03019
]
139405883
03041 Spliceosome [BR:
ocla03041
]
139405883
Messenger RNA biogenesis [BR:
ocla03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
139405883
Spliceosome [BR:
ocla03041
]
Complex C
Other components
EJC/TREX
139405883
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_3
RRM_5
Motif
Other DBs
NCBI-GeneID:
139405883
NCBI-ProteinID:
XP_071004422
LinkDB
All DBs
Position
3:complement(29383943..29387471)
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AA seq
175 aa
AA seq
DB search
MADVLDLHEAGGEDFAMDEDGDDSIHKLKEKAKRRKGRGFGSEEGARSRVREDYDTVEQD
GDEPGPQRSVEGWILFVTGVHEEATEEDIHDKFAEFGEIKNLHLNLDRRTGYLKGYALVE
YETYKEAQAAMEGLNGQDMMGQPISVDWGFVRGPPKSKRRGGGRRRSRSPDRRRR
NT seq
528 nt
NT seq
+upstream
nt +downstream
nt
atggcggacgtactagatcttcatgaagcgggaggcgaggactttgctatggatgaggat
ggtgatgacagcatccacaagttaaaagaaaaggcaaagaggagaaagggacgaggtttt
ggttcagaggagggagcgaggtccagagtgagagaggactatgatacagtggagcaggat
ggagacgagccaggtcctcagagatctgtggagggttggatccttttcgtgactggggta
catgaagaggcaactgaggaggacatccacgacaagtttgcagagtttggagagatcaag
aacctacacctgaacctggaccgaagaacaggttacctcaagggttatgcgctggtggag
tatgagacatacaaagaagcccaggcagccatggaagggttgaatggccaggacatgatg
ggccagcctatcagtgtggactggggctttgtcagaggaccacccaagagcaagaggagg
ggtggtggacggagacgcagcaggagtccagacaggagacgacgttga
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