Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139405885
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Entry
139405885 CDS
T10872
Name
(RefSeq) high affinity nerve growth factor receptor-like
KO
K03176
neurotrophic tyrosine kinase receptor type 1 [EC:
2.7.10.1
]
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla04010
MAPK signaling pathway
ocla04020
Calcium signaling pathway
ocla04210
Apoptosis
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
139405885
04020 Calcium signaling pathway
139405885
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
139405885
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
ocla01001
]
139405885
Enzymes [BR:
ocla01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.10 Protein-tyrosine kinases
2.7.10.1 receptor protein-tyrosine kinase
139405885
Protein kinases [BR:
ocla01001
]
Receptor tyrosine kinases (RTK)
TRK family [OT]
139405885
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PK_Tyr_Ser-Thr
Pkinase
I-set
Ig_3
LRRCT_2
LRR_8
ig
Ig_2
TrkA_TMD
LRR_5
C2-set_2
Atypical_Card
C2-set_3
CFC
Motif
Other DBs
NCBI-GeneID:
139405885
NCBI-ProteinID:
XP_071004426
LinkDB
All DBs
Position
3:29416926..29445739
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AA seq
806 aa
AA seq
DB search
MAVGSAPWAAPLALVLLAITLAVPALGGCPSACRCSFAMLQCLEPNGIATIPMLALQESE
NVTEIYIENQADLENITEVDLANYRELKNLTVTFCRLAYISVNAFQHNLKLQYVNLASNS
LEHISWKVFHFLPLLNLVLRDNPLECSCDIHWLQQWQLNDHSDLDNQPLHCLSNGHARRL
DSLVMENCTVPDVAIVHANTKVQEGGNLTFVCQVTGVPVPVVRWRTNKLLSRYTVQERFW
GSTLELELQLWNMSSEDNLHNLTCEAENRAGPGEEKVTLDIEFPAKIIFLHNAEQQHHWC
FPFKVDGNPEPTIRWLFNGSNLTEGLYTYTQFIPDSDDGSVKHGCLFLNKPTHLNNGLYT
IIVGNRLGVDQATATGKFMDNPFDPFDPEGIIPVLEESDPLPTNKSNEDVTENLESRVFG
VSVAVGLAVFACTFLLIMVLVINKCGQQSKFGIHRSSVLGTEDDLAVSLRFMNLGASPPS
SDDSGMSSFVENPQYFCGIFKDKDMCVQHIKRQDIVLKWELGEGAFGKVYLAECANLSPD
SDKMLVAIKTLKDANESTRQDFQREAELLTVLQHQNIVRFYGVCTDGEPLAMVFEYMRHG
DLNRFLRAHGPDAHILEEVKMPPLGQLTLPQMLNIAAQIASGMVYLASLHFVHRDLATRN
CLVGDMGEGLMVKIGDFGMSRDIYSTDYYRVKVGGRTMLPIRWMPPESIMYRKFTTESDI
WSFGVVLWEIFTYGKQPWYQLSNSEAIECITQGRELERPRTCPKEVHCLMQGCWQREPQQ
RLVIKDIHSRLLALVKSPPIYLDILG
NT seq
2421 nt
NT seq
+upstream
nt +downstream
nt
atggctgtgggttctgctccatgggcagccccactggccctggtactactggcaatcact
ctggcggtgccagccctaggagggtgcccatccgcctgccggtgctccttcgccatgcta
cagtgcctggagcccaatggcattgccactataccaatgttggcactacaggagagcgag
aacgtcacggaaatttacatcgaaaatcaagccgacctggagaacatcacagaagtagac
cttgccaactatagagagttgaagaatctcacggtcacgttctgcaggctggcctacatc
tcggtgaatgctttccaacacaacctcaagctccaatatgtaaacctggcatctaactcc
ctggagcatatcagttggaaggtgttccattttcttcccctgctcaacctggttttgagg
gacaacccccttgagtgctcctgtgatatccattggctgcagcaatggcagcttaacgac
cacagtgaccttgacaaccaaccgctacactgcctctccaatggccatgcccgacggttg
gactccttagtgatggagaattgcactgtaccggatgtcgccattgtccatgccaacacc
aaggtccaggaggggggcaacctgacatttgtgtgtcaggtgacaggagtgcccgtgcct
gtagtgaggtggcgcacgaataaactgctatctcgctatactgtacaggagaggttctgg
ggctccactttggagctggagctgcagctgtggaatatgtcctcagaagacaacctgcac
aacttgacctgtgaggcggagaaccgggccgggcctggggaagagaaagtgacgttggac
attgaatttccagccaaaatcatattcctgcacaacgccgagcaacagcaccactggtgt
ttcccctttaaggtggacgggaaccctgagccaaccatccgctggcttttcaacggctcc
aacctgaccgagggcctctacacctacacacagttcattcccgactcggacgacggctct
gtgaagcacggttgtctatttctcaacaagcccacgcacctgaacaacggcctctacacc
atcatcgtggggaacagactgggcgtggaccaagccacggccacgggaaagttcatggac
aacccctttgacccctttgatcctgagggcatcatcccagtccttgaagaaagtgatcca
cttcccaccaacaaatctaatgaggatgtcactgagaacctggagagcagagtgtttggg
gtgtcggtggcagtgggtctggctgtgtttgcttgcaccttcctcctcattatggtactg
gtcatcaacaagtgtggccagcagtccaagtttggtattcaccgttcatctgtcttggga
acagaggatgatcttgctgtttcactgcgtttcatgaacttaggggcgagccctccttcc
tctgatgactctgggatgtccagctttgtggagaacccccagtacttctgtggcattttc
aaagacaaagacatgtgtgtgcagcacatcaaaagacaggacatagttctgaagtgggaa
ctgggtgagggggcgtttggcaaagtctacctggcagagtgtgccaacctcagtccggac
agtgacaaaatgctggtggccatcaagactctgaaggatgccaacgagtcgacccggcag
gacttccagagagaggctgagctgctcacagtgctccagcaccagaacatcgttcgcttc
tatggagtgtgtacagacggcgagccactggcgatggtgtttgaatacatgagacatgga
gacctcaaccgcttcctcagggcgcacggtccagacgcccatatcctggaggaggtgaag
atgcccccgctgggccagctcactcttccccagatgctgaacatcgccgcccagatcgcc
tcaggcatggtctacctggcctcccttcactttgtgcaccgggacctggccacacgaaac
tgcctggtgggagatatgggagagggtctgatggtcaagataggagactttggcatgtcc
cgggacatctacagcacagactactacagggtaaaggtgggtgggcgtacgatgcttcct
attcgctggatgcccccggaaagcatcatgtacaggaagttcaccacggagagtgatatc
tggagctttggagtggtcctctgggagatcttcacctatgggaaacagccctggtaccag
ctctcaaacagcgaggctatcgagtgcattacacagggccgggagctggagagaccacgc
acttgccccaaggaggtacactgcctgatgcagggctgctggcagagggagccccagcag
agactggtcatcaaggacatccacagccgcctcttggctctggttaagagcccccctatc
tatctggacatcctggggtag
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