Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139405952
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Entry
139405952 CDS
T10872
Name
(RefSeq) sal-like protein 3
KO
K19871
sal-like protein
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ocla03000
]
139405952
03036 Chromosome and associated proteins [BR:
ocla03036
]
139405952
Transcription factors [BR:
ocla03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
139405952
Chromosome and associated proteins [BR:
ocla03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
139405952
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C2H2
zf-H2C2_2
zf-C2H2_4
zf-C2H2_jaz
zf-met
zf-C2H2_15
zf-C2HC_2
zf-C2H2_11
IZUMO
TAFH
TDBD
UBZ_FAAP20
zf-H2C2_5
Motif
Other DBs
NCBI-GeneID:
139405952
NCBI-ProteinID:
XP_071004508
LinkDB
All DBs
Position
3:36672995..36690496
Genome browser
AA seq
1343 aa
AA seq
DB search
MSRRKQAKPQHLKSDEDSTIAGVVSENATGEVLDDADSGNESRSGSEETHVCEKCCAEFF
KWSDFCEHLTSCIKNPLVLIVNENETEPSREYPAEPSPSPSCRSDQADSEDAGEGSSHSP
GEDDEGAEIALEGSSALDKEDEPMELSLEKPVDLEESDTSPQPDGALPQLCDPAPSSVKS
YSMPSTNVTLETLHSTSVAVAQFSQSVHAAVAGSGVSPLAIPMILDQLMALQQQQIHQLQ
LIEQIRSQVALMQRQPSVTQPTQNHHRHHHSTVAGSQGPSSSSLPAVPSQLQQLHNFITP
PVHQLPIRLPSPLNSLGSSSSSLTSAIDGPLFSHTQQSSNQQSNVSMPNTTSANSSFPPS
SGNVLSSLLPPCMASITHSSSSGAESTGGGGMSSSSTALPRNSSSPLSLGHSSLLSTSPS
NLPLIPHSSSSSVIFPNPLASIAATANALDPLSALMRHRKGKPPNVSVFDTKPSSEDPFF
KHKCRFCAKVFGSDSALQIHLRSHTGERPFKCNICGNRFSTKGNLKVHFQRHKEKYPHVQ
MNPYPVPEYLDNVPTSSGIPYGMSFPPEKPVTTWLDSKPVLPTVPTSVGLQFTTTLPSMM
GGYGDSPSLTPLSRSPQRPSPPSSECASRSPNLFTEAGMITTSQSPQPNLGGDMPPILKP
EGIHLPPNLPTSRPGENTTTTTTVTQVVLATTVNATTSTSSYTEPIIAPSSVSHPILPMI
SDQFKAKFPFGGLLDSMQTSETSKLQQLVENIDKKMTDPNQCVICHRVLSCQSALKMHYR
IHTGERPFKCKVCGRAFTTKGNLKTHFGVHRSKPPLRVQHSCPICQKKFTNAVVLQQHIR
MHMGGQIPNTPLPESLQEMDTDLSFDEKSLDAMSNYDDELLDEMEAAMEDEAELKEGEMM
MDPSKPLHPYSGMSPGRSPPTSVISSIAALENQMKMIDSSVNMSRSFGLKPMQNGGGFGG
ENDFFNNDSLYASGDLEGQSVGSPALSESSGSMQPLSPAHSHPESHRSKSPGTLNHSSST
AAEGQENNGMATVKSEKSDTPSPAPVSEGNVALDLTASLTQPSRHFIKEENHFNMMFLGR
DRGLSNSSLLNTASNMIKMEMNGHRHRKPMSLNDGPYMPVGIQVPASAPQTNMSPSITPM
LAPPTPRRTPKQHNCHNCGKNFSSASALQIHERTHTGEKPFGCSICGRAFTTKGNLKVHM
GTHMWNNAPARRGRRLSVENPMALLGGDAMKFSEMFQKDLAARAMNVDPGFWNQYAAAIT
NGLAMKNNEISVIQNGGLPQLPVSLGGGGMTSLRAMSGGMDHMDRVNASSSPPMTGMDKT
GLEVGARRPFARFMEENKEIGIN
NT seq
4032 nt
NT seq
+upstream
nt +downstream
nt
atgtcccgtcgcaagcaagcgaagccacagcacctcaagtcggacgaggattccacaata
gccggggtggtatccgaaaacgccacaggagaagtgctggatgacgcagacagtgggaat
gagagccgcagtgggagtgaggagacccatgtgtgtgagaagtgttgtgccgagttcttc
aagtggtctgatttctgtgaacacctgacgagctgcatcaagaaccccctggtgctcata
gtaaacgaaaacgagactgaaccctcccgggagtatcctgcagagccatcgccctcgcca
agctgtcgtagtgaccaggcagacagcgaggacgctggagagggcagcagccacagcccc
ggtgaggacgatgagggcgcagagatagccctggaggggagcagtgccctggacaaggag
gacgagcccatggagctgtctcttgagaaaccggtggacctcgaagagagtgacacctcc
ccacagccagatggtgctctacctcagctttgcgatcctgccccatcctctgtgaagagc
tacagcatgccgagcaccaacgtcaccctggagacgctacacagcaccagcgtggcagtg
gctcagttctcccagagtgtccatgccgcggtggccggtagtggggtctccccattggcc
atccccatgatcctggaccagctgatggcgctgcagcagcaacagatccaccaactccaa
ctgatcgaacagatccgcagtcaggtggccttgatgcaaaggcagccctccgtcacccag
ccaacccagaaccatcaccgccaccaccacagcacagttgctggctcccaggggccgtca
tcctccagcctccctgccgtgcccagccaactccagcagttacacaacttcatcactccc
cctgtccaccagctacccatcaggttgccctcaccgctaaacagcctgggctcctcctcc
tcctccctcacctctgctatagatgggcccctcttctcccatacccagcagagtagcaat
cagcagtcaaatgtttcgatgcccaacaccacctcagcaaactcctctttccctccatcc
agtggtaatgtgctgtcgtctctactgcctccctgcatggcttcaatcacacacagcagc
agcagtggagctgaatccacaggtggaggaggcatgagcagcagcagtacagctctgcca
aggaattccagcagccccctttcactaggccacagcagcctcctgagcaccagtccctcc
aatctaccactgatacctcacagttcatctagcagtgtcatcttcccaaacccgctagcc
agtatagctgccacggccaatgcacttgacccactctccgctctgatgaggcaccgcaag
ggaaagccccccaacgtgtctgtcttcgacaccaagcccagctccgaggaccccttcttc
aagcataagtgtaggttctgtgccaaggtgtttggcagtgacagtgccctgcagatccac
ctgcgctctcacaccggcgaacggcccttcaagtgcaacatctgcggaaaccggttctcc
accaagggaaatctgaaggtccacttccagaggcacaaggagaagtacccgcacgtccag
atgaacccttatcccgtgccagaatacctggataacgtgccgaccagctcaggcatacca
tatggtatgtccttccccccagagaagccggtgaccacctggctggacagcaaacctgtt
ctccccacagtccccacctcagtcgggctccagttcaccacaactctccccagcatgatg
ggaggctacggtgattccccgagcctcactccccttagcagatcaccccagaggccctcc
ccaccctccagtgagtgcgcctctcggtcacctaacctcttcactgaagcaggcatgatc
accacctcacagtctccacagcccaacttagggggtgacatgcctcccattcttaaacca
gagggcatccacctgcccccaaacctacccacttccaggcctggtgagaacaccaccacc
accaccaccgttactcaagtggtcctcgccaccacggtcaacgcgaccacatccactagc
agctatactgaacccatcattgccccctcctcggtttcccatccaatccttcccatgatc
tctgatcagttcaaggccaagtttccgttcggcggcctcctggactctatgcaaacgtct
gagacctcaaagctgcagcagctggtggagaacatcgacaagaagatgaccgaccccaac
cagtgtgtcatctgtcaccgtgtgctcagctgccagagcgccctcaagatgcactaccgc
attcacacaggggaaaggcctttcaaatgtaaggtctgcggccgagcgttcaccaccaag
ggcaatctgaaaacacactttggggtccatcgttccaagccccctctccgggtccaacac
tcctgccccatctgccagaagaagttcacgaacgctgtagtcctgcaacagcacatccgc
atgcacatggggggccagatccccaacacccccctgcccgagagtcttcaggagatggac
accgacctctcctttgacgagaagagcttagacgccatgagcaactacgatgacgagcta
ctggatgagatggaggcagctatggaggacgaagcagagctgaaagaaggagagatgatg
atggacccatccaaacctctccatccatattcaggaatgtcccctggtcgctccccacct
acctctgtcatctccagcattgctgctctggagaaccagatgaagatgatcgactcctct
gtcaatatgagtcgctcgttcgggctgaagcccatgcagaatggtggcgggtttggaggg
gagaatgacttcttcaacaatgactcgctgtatgcctcgggggacctggaaggccagagt
gttggaagcccggcactatctgagtcctcagggtccatgcagcccctctcccctgctcac
agtcaccctgagagtcatcgatccaagtccccaggtacactcaaccatagcagcagcact
gcagcagaggggcaggagaacaacgggatggctacagtgaagtctgagaagtcagacacc
ccatccccggcacctgtgtctgaaggtaatgtggcattggacctgactgctagtctaacc
cagcctagcaggcacttcatcaaggaggagaaccacttcaacatgatgttcctgggcaga
gatagaggtctgagcaactctagcttgctaaacacagcatccaacatgatcaaaatggag
atgaatgggcacaggcacagaaagcccatgtccctgaatgacggtccttacatgcctgtg
ggcatccaagtgcccgcttctgcaccccagaccaacatgagccccagtatcacccccatg
ctggcaccgccaactccccgtcgcacccccaagcagcacaactgccacaactgtgggaag
aacttctcctcggctagtgccctgcagatccatgagcgcacacacacaggagagaaacca
tttggctgctcgatctgtggaagagccttcaccactaaaggcaacctgaaggtgcacatg
ggcacccacatgtggaacaatgcgccagcccgtcgtggacgccgtctctccgtggaaaac
cccatggccttgctgggcggagacgccatgaagtttagtgagatgtttcagaaggacttg
gcggcgagggccatgaacgtagaccctggcttctggaaccagtatgctgccgccatcacc
aacggcctggccatgaagaacaacgagatctccgtcatccagaatggaggcctcccccag
ttgcccgtcagcctgggtggaggaggtatgacctcgctaagggccatgtctggtggtatg
gaccatatggaccgggtgaatgccagcagcagtcctcccatgactgggatggataagaca
ggtctggaggttggggctagacgccccttcgctcgatttatggaggaaaataaagagatt
gggatcaattaa
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