Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139406006
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Entry
139406006 CDS
T10872
Name
(RefSeq) protein Wnt-10a-like
KO
K01357
wingless-type MMTV integration site family, member 10
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla04150
mTOR signaling pathway
ocla04310
Wnt signaling pathway
ocla04519
Cadherin signaling
ocla04916
Melanogenesis
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
139406006
04150 mTOR signaling pathway
139406006
09133 Signaling molecules and interaction
04519 Cadherin signaling
139406006
09150 Organismal Systems
09152 Endocrine system
04916 Melanogenesis
139406006
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
ocla00536
]
139406006
Glycosaminoglycan binding proteins [BR:
ocla00536
]
Heparan sulfate / Heparin
Morphogens
139406006
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
wnt
DUF6973
Motif
Other DBs
NCBI-GeneID:
139406006
NCBI-ProteinID:
XP_071004569
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All DBs
Position
3:50973328..51000888
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AA seq
387 aa
AA seq
DB search
MDFSLCRLICLVIAITMFNQRVDSNKILGLKIPNIDPILNANTVCLTLPGLNHRQLEVCM
RNPDVTASAIQGIQIAIHECQHQFRGHRWNCSSLETRNKIPYDSVVFKRGFRESAFAYAI
AAAGVVHAVSNACSMGKLKACGCDEKRRGDEEAFRIKLNRLQLEAIHRGKGMVHGVMEHF
PADLPGPQDSWEWGGCSPDVDFGEKFSRDFLDSRETYKDIHARMRLHNNRVGRQVVMNHM
RRKCKCHGTSGSCQLKTCWQVTPEFRVVGSLLKERFHIATLIKAHNRNTGQLEHAHHPTH
RRLNELVYFEKSPDFCERDLRSDSAGTQGRICNKTSHEMDNCESLCCGRGRNILQQTRSE
RCNCKFHWCCYVVCEECRITEWVSVCK
NT seq
1164 nt
NT seq
+upstream
nt +downstream
nt
atggatttctcgctctgccgcctaatatgtcttgtgattgcaatcactatgttcaatcaa
agggtagattccaacaagattcttgggctgaagatccccaatatcgaccccattctcaat
gctaacaccgtgtgcttgaccctgcctggactgaaccacagacaactggaggtgtgcatg
agaaaccccgacgtcaccgcctcggccatccaaggcatccagatcgccatccatgagtgc
cagcaccagttcagaggacacaggtggaactgctccagcctggagaccaggaacaagatc
ccatacgatagtgtggttttcaaacgaggtttccgagagagcgcctttgcatacgccatc
gcggcagcgggcgtggtccacgccgtgtccaatgcctgctccatggggaagctgaaggcg
tgcggctgcgacgagaagcggagaggcgatgaggaggctttccgcatcaaactgaaccgg
ttgcagctggaggccatccaccgggggaagggcatggtgcacggagtcatggagcacttc
cctgcagacctgcccgggcctcaggactcctgggagtggggaggctgcagcccggacgtg
gactttggggagaagttctccagggacttcctggactcgcgcgagacatacaaggacatc
catgccaggatgaggctccacaacaacagagttggcaggcaggtggtgatgaaccacatg
agacggaaatgcaaatgccacgggacatcaggaagctgccagctgaaaacctgctggcaa
gtcacaccggagttcagggtggtaggctcgctgctcaaggagcgtttccacatagccacc
ctcatcaaagcgcacaacaggaacacgggccagctggagcacgcccaccaccccacacac
agacgactcaacgagctggtctactttgagaagtccccggacttctgcgagagggatctg
cggtccgactcggccggaacgcaagggaggatctgtaacaagacgagtcacgaaatggac
aactgtgaaagcctctgctgcgggcgaggccgtaacattttacagcagacccgcagtgaa
cgatgcaactgcaagttccactggtgctgttacgtggtctgcgaagagtgtcgaataaca
gagtgggtcagtgtctgcaaatga
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