Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139406027
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Entry
139406027 CDS
T10872
Name
(RefSeq) transcription factor Sp9
KO
K09199
transcription factor Sp9
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ocla03000
]
139406027
Transcription factors [BR:
ocla03000
]
Eukaryotic type
Zinc finger
Cys2His2 SP/KLF family and related proteins
139406027
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Gene cluster
GFIT
Motif
Pfam:
zf-H2C2_2
zf-C2H2
zf-C2H2_4
zf-Di19
zf-met
B129_C2H2-zf
zf-C2H2_8
Zf-C2H2_ZNF451_2nd
zf-C2H2_6
Zap1_zf1
DUF5810
Zn_ribbon_FGT1_2
zf-C2HC_2
Motif
Other DBs
NCBI-GeneID:
139406027
NCBI-ProteinID:
XP_071004592
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Position
3:54847949..54850481
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AA seq
435 aa
AA seq
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MATSILGEEPRFGTTPLAMLAATCNKIGNTSPLTTLPDSSAFSKGGFHPWKRSSSSCNLG
SSLPGFTVATSRGSTGLTSTTGTGNSAFCLASTSPTTSAFSTEYSSLFSNSASISSQESG
QSAFISKVHTSAETLYPRVGMAHPYESWYKSGFHSTISGDVTNGASAWWDVHTNPGSWLE
VQNPASSLQTSLHSGTPQAIHSQLSGYNPDFSTLTHSAFSSTGISPTASHLLSTSQHLLT
QEGFKTVIPTYTDASAANAMISGSSSGSSRSSRRYSGRATCDCPNCQEAERLGPAGASLR
RKGLHSCHIPGCGKVYGKTSHLKAHLRWHTGERPFVCNWLFCGKRFTRSDELQRHLRTHT
GEKRFACPVCNKRFMRSDHLSKHIKTHTAGGGEGKKGSDSDTDTSNLETPRSESPELILD
GVNPRIKDPSPHDEH
NT seq
1308 nt
NT seq
+upstream
nt +downstream
nt
atggctacgtctatacttggggaagaaccacgatttggaactacacctctagctatgctg
gctgctacttgtaacaaaattggcaataccagtccccttaccactctacctgattccagt
gctttttcaaaaggcggatttcatccttggaaaagatcctcctctagttgcaacttggga
tccagtctccctggattcactgtagcaacaagccgcggatcgaccggactaacatcgact
actggcacaggcaacagcgcgttctgcttagcctcgacctccccgaccacatctgcgttt
tccacagagtacagcagtctgttttccaactcagcaagcatttcgtctcaagagtctggg
caatcagccttcatttccaaagtccacacatcagcagaaaccttgtacccgagggtaggg
atggcacatccgtatgagtcgtggtacaagtctggtttccattcaaccatctcgggcgat
gttactaatggggcgtccgcgtggtgggacgttcataccaaccctggctcatggctcgag
gtccaaaaccctgcaagctcgctgcagacctccctgcattccgggaccccccaagccata
cactctcagctcagtggctataaccctgacttctccactttgacacactcggcattcagc
tcaaccggcataagtcccacggcatcgcatcttctatcaaccagccaacacctgttaaca
caagagggattcaaaacagtcattccaacatacacggacgcctctgccgccaacgctatg
atttcaggttccagttctggttcctcaaggtcatccaggaggtactctggcagagccacg
tgcgactgtccgaactgtcaggaggctgagcggctggggcctgcaggggccagcctccgg
aggaaaggacttcacagctgtcacattccaggctgcggtaaggtgtatggcaaaacctct
caccttaaagcccatttgagatggcatactggcgagcggccatttgtctgcaattggctt
ttttgtggcaaaagatttacaagatcagatgaacttcagagacacctccgtacccacacc
ggcgagaaaaggtttgcttgcccagtatgcaacaagcgctttatgaggagcgaccatttg
agcaagcacattaaaacccacactgccggtggaggtgaaggcaaaaagggaagcgacagt
gacaccgacaccagtaacctggagacccccaggtccgagtccccagaactcattttagac
ggggtaaaccccagaatcaaggatccatctcctcatgacgagcactga
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