Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139406048
Help
Entry
139406048 CDS
T10872
Name
(RefSeq) interleukin-1 receptor-like 1
KO
K05171
interleukin 1 receptor-like 1
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla04060
Cytokine-cytokine receptor interaction
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
139406048
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04050 Cytokine receptors [BR:
ocla04050
]
139406048
Cytokine receptors [BR:
ocla04050
]
Interleukin receptor families
IL1 receptor family
139406048
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TIR
Ig_3
I-set
Ig_2
Ig_5
TIR_2
Ig_4
Motif
Other DBs
NCBI-GeneID:
139406048
NCBI-ProteinID:
XP_071004612
LinkDB
All DBs
Position
3:56584521..56588864
Genome browser
AA seq
590 aa
AA seq
DB search
MQVPVLRKMCSFTFRLVDGGLMFLLLSLTRISAQREMSLNPTTIGHYTESPCQLFDKYET
TVTEGEALSLPAYYDLSELVWASVTEFTWYRNRTQELSSSKEERVHHHGPVLFFLPLLIN
DSDQYYTYWRKAADTCLIFVTEVIVVKAQPFDHSVLFNDISESAENIAIPCPEPVEKVCQ
DGKENLAWYKNFSLIPNESERNLWVYGASKADEGIYTCVCTWEHNGMVLKTSASRRLKIQ
APSASHPPQINLPINGSTETTDLYTTKKLRCEAFCGQNIEDNCQVWWEINGVKVRSQQQG
YSVNNTSEVEVSSMRSIFTAILIINTVTMRDLQSKFTCFAMNDQKWDCAVVTLKLRGFMF
MGLCVVLLLFVLLAAVAVKVFDIDLALLFRGVFKCCGRSEDGKVYDAYVVYQMDGLDQER
EEKVYHFVSIVLPTVLEQKCGFRLFIHGRDDLPGEDRMELVEACIRLSRRLIVILTPSSS
TWSDSEGQSSCGQWGCSSSLTTAEDYDCQVGLYQALVHSEMSVILIQLGDMGEGGYTHLS
PGLQHLVRKSAPLMWHEGRRGSTLPNSSFWKRVRYMMPWSRSTSFDNQLI
NT seq
1773 nt
NT seq
+upstream
nt +downstream
nt
atgcaagttcctgttttgcggaaaatgtgctccttcacattcaggttggtggatggtggt
ctcatgttcctgctcctcagtttgactaggatttctgcccagagagaaatgtccttaaac
cccactacaataggtcattacacagagtccccatgtcaactatttgacaagtatgaaact
actgtgacagagggggaggcccttagtttgccagcctactatgacctgagtgagttggtt
tgggccagcgtgactgagtttacctggtacagaaacagaacccaagagctctcgtcctct
aaggaagagcgtgtgcatcatcatggaccggtgctcttcttcctcccccttttaatcaac
gactctgatcagtactacacctactggagaaaggcagcagacacctgcctaatttttgtg
acagaggtgattgttgtcaaagcccaaccgttcgatcattcagtcctgtttaacgatatc
tcagagtcagcagaaaacatcgctatcccatgtcctgaacccgtggaaaaagtatgccaa
gatggaaaagaaaacttagcctggtataagaatttcagtctcattccaaacgagtctgag
agaaatctgtgggtgtatggcgcctccaaagcagacgagggcatctatacgtgtgtgtgc
acgtgggagcacaatgggatggttctcaaaacttctgcatccaggagactaaagatccaa
gctccctctgcctcgcatcctcctcagatcaacctgcctataaacggaagcacagagacc
actgacctgtacaccactaagaagttgaggtgtgaagcgttttgtgggcagaacattgaa
gacaactgtcaagtgtggtgggagataaatggagtgaaagtgcgctcgcagcagcaaggc
tactctgtgaacaacaccagcgaggtggaggtatcttcaatgcgaagtatcttcacagct
atcctgatcataaacacagtgactatgagggacctccagtcaaagttcacatgttttgca
atgaacgaccagaaatgggattgtgcagtggttactctcaagctaagagggtttatgttt
atgggtctatgtgtggtgctactgctcttcgtcttgctagctgctgtggccgttaaagtc
tttgacatcgatctggcgctgctcttccgtggagttttcaaatgctgtggtcgatctgag
gatgggaaggtctatgatgcttacgttgtctaccagatggatggcttagatcaggaaagg
gaggagaaagtgtatcactttgtgagcattgttctgcccactgtcctggagcagaagtgt
ggctttagactcttcatccacggcagagacgacttacctggagaagaccgcatggagttg
gtggaggcctgcatacggctgagcaggaggctgattgtcatcctgacccccagctcaagc
acatggtcagactcagaaggtcaaagctcatgtggccaatggggctgctcgtcttcgctg
accacagcagaagactatgactgtcaggtggggctctaccaggctctggtccacagtgag
atgagcgtcatcctcatccagctgggggacatgggggagggtggctacacacacctgtcc
cctggcctgcagcacctggtccgcaagagtgcccccttaatgtggcatgagggaaggcgt
gggtcgacgctgcccaactcaagcttctggaagagggtgcgttacatgatgccttggtcg
cgctcaactagttttgacaaccagttaatatga
DBGET
integrated database retrieval system
