Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139406104
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Entry
139406104 CDS
T10872
Name
(RefSeq) macrophage receptor MARCO isoform X1
KO
K13884
macrophage receptor with collagenous structure
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla04145
Phagosome
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
139406104
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ocla04131
]
139406104
Membrane trafficking [BR:
ocla04131
]
Endocytosis
Phagocytosis
Scavenger receptors
139406104
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
SRCR
SRCR_2
Motif
Other DBs
NCBI-GeneID:
139406104
NCBI-ProteinID:
XP_071004679
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All DBs
Position
3:70104029..70118432
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AA seq
446 aa
AA seq
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METSVDRGEGHVSSFCHSNPLYDMDMKLSRTDLYTFQSSDLKPAKARGAQRCLNVIVVYL
ILLTALNAFFLYKVFSMEASSLSSSGSRTAKLTDNHIPLEEDLRTLARNTSLETISLRGY
LGKLQTQVNSLCGEDGQLGQLRTNLGAVNASTTLLQDSVKAFRLLKASPGPQGPTGPPGA
RGLPGVRVDKGDRGQTGQKGDPGVDGQTGAKGEAGEPGPEGEDGTTGQQGPAGTPGGAAT
NCSGAPGLPGPQGPKGDMGHIGLPGIPGQNGIKGHTGAQGRDGVQGAPDLKGDTGPTGLH
GPIGPEGPRGLAGVNGTRGLVGFPGLPGSPGPLGPRGEKGERAAESVTANVRIAGGGTRG
RVEVMWSGQWGTVCDDGFDTLDGTVICKMLGYQRASTVFTASHGIGRIWLDGLRCTGREA
SVFYCLHNGMGISNCQHNEDAGVQCV
NT seq
1341 nt
NT seq
+upstream
nt +downstream
nt
atggagacatcagtagacagaggagagggccacgtcagctcgttctgccatagtaaccca
ctttatgacatggacatgaaactgagcaggactgacctgtacaccttccagagcagtgat
ctaaaaccagccaaggccagaggagcacagcgatgtctaaatgttattgtcgtttacctc
atccttctgactgcactgaatgccttcttcctttacaaagtgttttcgatggaggctagt
agtctctcctcctctggctccagaacagcgaagctgaccgacaatcacatccccctggag
gaggacctccgtacccttgccagaaacaccagcttggagaccatctctctcagaggatac
ctggggaagttacagacccaggtcaacagcctctgtggggaggatggccagctgggccag
ctgagaacaaacctgggtgcggtcaacgccagcaccactctccttcaggactcagtgaaa
gcattcagattactcaaagcttcaccaggcccacagggacctactggtccacctggtgcg
agggggttacctggtgtgagggtggacaagggagacaggggtcagacaggacaaaaagga
gaccctggagttgatggccagactggagccaagggagaagcaggggaaccaggacccgaa
ggtgaagatggtaccactggacaacaaggaccagctggaacaccaggcggtgcagctact
aactgttcaggagcccctgggctgccaggaccacagggaccaaagggggatatgggacac
attggtttaccagggataccaggccaaaatgggatcaaagggcacactggagcccagggc
cgtgatggagtacagggggcccctgatttgaagggtgacacagggccgacaggactacat
ggacccataggacctgaaggaccaagaggacttgctggtgttaatggaacaagaggactt
gttggatttccagggttgccgggaagtcccggaccgctaggtccacgtggagagaagggt
gaaagagcagctgaatcagtgacagcaaatgtgcgtatcgctggcggggggactcgtggg
agagtggaggtgatgtggtcggggcagtggggtacggtgtgtgatgacggctttgacact
ctggacgggacagtgatctgcaagatgctggggtaccaacgagcctccacagtcttcaca
gccagccatggaatcggtaggatctggttggatggcctgcgatgcacaggcagagaggcc
agtgtgttttattgccttcacaatggtatgggcatcagcaactgtcaacacaacgaggac
gctggggtgcagtgtgtgtga
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