Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139406117
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Entry
139406117 CDS
T10872
Name
(RefSeq) probable ribonuclease ZC3H12C
KO
K18668
ribonuclease ZC3H12 [EC:3.1.-.-]
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Brite
Messenger RNA biogenesis [BR:
ocla03019
]
Eukaryotic type
mRNA degradation factors
Other degradation factors
RNases
139406117
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GFIT
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NCBI-GeneID:
139406117
NCBI-ProteinID:
XP_071004694
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Position
3:complement(71368320..71382829)
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AA seq
873 aa
AA seq
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MGLKEHLEDETGHILNLGLDLDYLHVEGTDRQASLSATVGTHSGALERDETEVGGTHSSV
SSSSISSSSCCSNSSEESAASDSEDERGVQHASGSDAQTTHPLPCHPAGQGPAQSPQSRD
PKHSTNPFTEYRSKLEFALKLGYSEELVLLVVRKLGPDALINDILGELVKLGTKSETDQA
GGSATSHSPSSSSLSSSSLDSCRLDCSSQLLLDDKENIRPVVVDGSNVAMSHGNKEVFSC
HGIQLAVDWFLERGHRDITVFVPAWRKEQSRPDTLITDQEILRHLEKDKILVFTPSRRVQ
GRRVVCYDDRFIVKLAYESDGIIVSNDNYRDLANEKPEWKKFIDERLLMYTFVNDKFMPP
DDPLGRHGPSLENFLRKRPVIPEHRKQQCPYGKKCTYGHKCKFFHPERGSQPQRAVADEL
RAKNFSSSSTSSSKMVGEALMVKSHSMSSTSRVDGIPDPHQAPPKRQSDPSLCAPSYNDL
LEERLGRRTKAEARRGSSSSSNSSSSLLASAPGGPPSSHDFSLQDWGNTSSRAPGLSGLG
HSKSYSTCESPELSYHSLMGAYSSLSLVVPRSPDRLFPADLRTGSMVSECSSEGSVSSDS
FSPDPLLDDSLKCHYPHPHHHHHHCPSCYPHHPNHPPPGLTQHPHGGSHHGYPLAQSSLE
DPPSSLHHFKAQLSYLPPHIQQPSVGSHSGCSGNYPPQPLSQTSSPHSHSHSSPLGHNLG
GSTWQDNNSLYKQSPVHPRRIYPGPGQEQRLARWDPHYKHLPQACYEPFTFQSLPEGRKQ
PWHSPWPRGTHSPHPQSLSSSHLPPLTHHSTAPQHQEPPALGRYQDVRENVFVNLCNIFP
PELVRVVMVRNPHVMDAQQLAAAILAEKSQAGY
NT seq
2622 nt
NT seq
+upstream
nt +downstream
nt
atgggcctgaaggaacatctggaggatgaaacaggccacatcctcaacctggggctggat
ttggactacctccacgtggaaggcaccgaccgccaggccagcttgagtgccacagttggc
acccactcaggagccttggagagggacgagacggaggtaggaggcacccatagcagtgtc
agtagtagcagcatcagcagtagtagttgttgtagtaactcctctgaagagagtgctgcg
tcagacagcgaggatgagcgaggggtccaacatgcctctggttctgacgctcagaccacc
cacccactcccctgtcaccctgctgggcagggcccggcacagagcccccaatctagagac
ccaaaacactccaccaaccccttcacagagtatcgctccaagttggagtttgccctgaag
ctgggctactctgaggagctggttctgctggttgtgcggaagctagggcctgacgccctc
atcaatgacatactgggagaactggtcaaactgggcaccaagtcagaaacggatcaggct
ggagggtcagccacctcccactcgccctcctcctcctccttatcctcctcctctctggac
tcctgcaggctggactgctcctcccagctgctgttggatgacaaggagaacatcaggcct
gtggtggtggatgggagtaatgtagccatgagccatgggaataaggaagtgttctcctgt
cacggcatccagctggctgttgattggttccttgagcgcggtcaccgtgacatcactgtg
tttgtgcccgcctggagaaaggaacagtccagaccggacactctcatcacagaccaggag
atattgcggcatctggagaaagacaagatccttgtgttcactccctctcgtcgggtccag
ggccgccgggtggtctgctacgatgaccgcttcatcgtcaagctggcctatgagtccgac
ggcatcatcgtctctaacgacaactaccgggacctggccaatgagaagccagagtggaag
aagttcattgacgagcggttgctcatgtatacgttcgtcaatgacaagttcatgcctcct
gatgatcctctgggtcgccatggtcccagtctggagaacttcctgaggaagagaccagtt
atcccagaacacaggaagcagcaatgtccctatgggaagaagtgcacttacggccacaag
tgtaagttcttccaccctgagagaggcagtcagccccaacgcgctgtggccgacgagctg
cgtgccaagaacttctcttcatcctctacctcttcctccaaaatggtgggagaggctctg
atggtgaagagtcacagcatgtccagcacctccagggtagacgggatcccagacccccac
caagctcccccaaagagacagtcggaccccagcctttgcgccccctcctacaacgacctc
ctggaagagcgtctgggcaggaggactaaagcagaggcccgcagagggagtagcagcagc
agtaacagcagcagcagcctcctggcttctgctcctgggggacctccttccagccatgac
ttctctcttcaggactgggggaacacctcctccagagctccagggctgtcggggcttggt
cactcaaagtcatactccacctgtgaatccccggagctaagctaccactccctgatgggg
gcttactccagcctaagcctggtagtgccgcggagccccgatcggctgttcccagctgac
ctacggacgggctcaatggtgtctgaatgcagcagcgagggcagcgtgagctcagactcc
ttctcccctgatccgctgctggatgacagcctcaagtgccactatccccacccccatcac
caccaccatcactgccctagctgctacccacatcaccccaaccacccaccccctggtttg
acccagcacccccatggaggctcccaccatggctaccctctagctcagagcagcctggag
gatcctccctcctccctccaccacttcaaggcccagctctcctaccttcctccccatatt
cagcaaccgtctgtggggagccactctggctgttctgggaactaccctccccaacctcta
tcccagacctcaagcccccactcccactctcacagctctcctctggggcataaccttggg
ggctccacctggcaggacaacaacagcctctacaagcaatcccctgtccacccaaggagg
atctaccctgggccaggacaggagcagcgactggccagatgggacccccactacaagcat
ctcccccaggcctgctacgagcctttcactttccagtccctgcctgagggccgcaaacaa
ccctggcactcgccctggcccagggggacacactctccccatcctcaatccctttcctcc
tcccatcttccacctcttacccaccactctacggccccccagcaccaggagccccctgcc
ctgggcagataccaggacgtgagggagaatgtgtttgtcaacctgtgtaacatcttcccc
ccagagctggtgagggtggtgatggtgaggaacccccatgtgatggacgcccagcagctg
gctgcagccatcctggctgagaagtcccaggctggctactga
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