Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139406144
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Entry
139406144 CDS
T10872
Name
(RefSeq) collagen alpha-1(VIII) chain-like
KO
K23455
collagen type VIII alpha
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
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Gene cluster
GFIT
Other DBs
NCBI-GeneID:
139406144
NCBI-ProteinID:
XP_071004729
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Position
3:complement(75906743..75936645)
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AA seq
750 aa
AA seq
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MVVPPFSAPLPLLVALLQLAVLPLVHAGAYYRHKQHPQQHQPTPHLSHMGIGGKEQHPQQ
HWPGKEMPHMQYPQYRKEIPQMSMHMGKTNPHKGGVVNSGQDKGQTIPSGALGGLPGGLP
GEQGPAGPPGPEGPSGPPGPPGEGQPGGEGKPGHAGPPGFPGIGKPGLPGIPGKPGSMGE
PGVPGELGPSGREGPMGQPGPQGSPGPSGLPGIGKLGAGGLPGQPGSRGEPGHKGLPGLP
GLPGPKGDKGIGQPGQPGHKGLAGPPGPPGQGGMPGVGKPGMNGMPGPPGGPGKPGLPGE
QGLAGPAGEGGEPGPPGLPGQGKPGQNGLPGQPGMPGGKGHTGPPGFPGKPGLPGFGKPG
FPGPKGDKGMGGMPGGPGPKGDKGHGGLPGMLGQPGSIGPAGPLGPMGPPGGLGQPGPKG
EAGEGGHKGLPGGQGEPGPTGLTGQNGFPGEGGEPGPRGPTGPVGPQGEGGHKGLPGAPG
IPGLPGPKGEGGLPGEKGPQGPKGIPGLGGAGGPIGPPGAPGSKGDSGTPGLPGVDGKGN
PGVPGPLGPPGKEGPGGPPGSPGQPGPPGPPGPPGPTDMGAVLPEMGFPPGLDGVKTAGY
GKKGKYGGNGGEVMGPNGLEMPAFTALVTTPFPPVGTAVVFDKILYNGRQNYNPQTGVFT
CDMPGIYYFAYHISCKGANVWVALMRNDEPVMYTYDEYKKGFLDQASGSAVLPLQPGDTV
YLQLPSDQAAGLYAGQYVHSSFSGYLLYPM
NT seq
2253 nt
NT seq
+upstream
nt +downstream
nt
atggttgtacctcccttctccgcccccctccctctcctagtggctctgcttcagcttgca
gtactacctcttgtccacgcgggggcgtactacagacacaagcagcacccgcagcagcat
cagcccacgccacacctgtcccacatgggcatagggggtaaggagcagcaccctcagcag
cattggccaggaaaagagatgccccacatgcagtacccccagtacagaaaagagatccca
cagatgtccatgcacatgggcaagacgaacccccacaagggtggagtagtcaacagtgga
caggataaaggtcaaaccatccccagtggggcattgggaggtctccctgggggtctgcca
ggagagcagggcccagctgggcctcccggacctgagggtccctctgggcctccaggacct
cccggggaaggacagccaggaggggaaggaaaaccaggccacgctggtcccccaggattc
cctggaataggaaaaccaggactcccaggaattccaggcaagccaggcagcatgggagag
ccaggagtacctggagaattgggccccagcggcagagagggtccgatggggcagccaggg
cctcaggggtcccctggtccttcaggtcttccagggataggaaaactaggggctgggggg
ttgccaggacaaccaggatccagaggagagccaggacacaaaggcctgccgggactacca
ggattaccaggacccaagggtgacaaggggattggacagccaggacagccaggccacaaa
ggactagcaggacctcctggacctccaggacagggagggatgcctggtgtgggcaagcct
ggaatgaatggcatgccagggccaccaggaggaccagggaaaccaggcctccctggagag
caggggctggctggaccagcaggagagggcggagagcccggtccaccagggctgccaggt
cagggaaaacctggccagaatggtctgccgggacaaccaggaatgcccggtgggaaaggg
cacacaggccctccaggttttccagggaagcctggattgcctggattcggaaaaccagga
ttcccaggacccaaaggagataaggggatgggtgggatgcctggaggcccaggaccaaag
ggagacaagggccatggaggactgcctggtatgctaggacagcctggatcaattggacca
gctggtccccttggccctatgggaccccctggaggtctgggtcaaccagggccaaaaggc
gaggctggagaaggaggtcataaggggttgcctggtgggcaaggggagcctggtcctact
ggactgactggtcagaatggcttccctggagagggaggagagcctgggccaaggggtccc
actgggcctgtaggaccccaaggggaaggcggacacaaagggttaccaggcgcccctggc
attccaggcctacctgggccaaagggagagggaggacttccaggcgagaagggtccccaa
ggtcctaagggcattccaggtctgggaggtgcaggtgggccgatcggacctcctggtgct
cctgggtctaaaggtgacagcggaactcctggtcttcccggcgttgatggtaagggaaac
ccaggtgtccctggtcctcttggacctccaggtaaagaaggtcctggaggaccaccggga
agcccaggccagccaggtccacctggtcccccagggcctcccggacccactgacatggga
gcagtcctccctgagatgggttttcctcctgggctggacggagtcaagactgccggttat
ggcaagaagggaaaatatggaggaaacggaggagaagtgatgggccccaacggcctggag
atgcccgcattcacggctctggtgaccacgcccttcccacctgtgggcacggctgtggtg
tttgacaaaatcctgtacaacggccgtcagaactacaacccccagacaggcgtgttcacc
tgcgacatgcccgggatctactactttgcctaccacatcagctgcaaaggggccaacgtg
tgggtggcgctgatgaggaacgatgagcctgtgatgtacacatatgatgagtataaaaag
ggcttcctggatcaggcatcggggagcgcagtgttacctctacagcccggggacactgtg
tacctccagctaccctcggaccaggccgcaggactatacgctggccaatacgtccactcc
tccttctctgggtacttgttgtaccccatgtaa
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