Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139406324
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Entry
139406324 CDS
T10872
Name
(RefSeq) tripartite motif-containing protein 16-like
KO
K28076
finTRIM family protein
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ocla04121
]
139406324
Ubiquitin system [BR:
ocla04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
139406324
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRY
SPRY
zf-C3HC4_4
zf-B_box
zf-RING_UBOX
zf-C3HC4_2
zf-C3HC4
zf-C3HC4_3
U-box
Fib_alpha
zf-RING_2
RING_XB3-XBAT31
Wtap
YscO-like
Spc24
Y1_Tnp
cas_Cpf1_2nd
Exonuc_VII_L
LMBR1
Motif
Other DBs
NCBI-GeneID:
139406324
NCBI-ProteinID:
XP_071004920
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Position
4:complement(4156646..4177681)
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AA seq
547 aa
AA seq
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MAQQGVQLDQDQFCCSVCLDLLKEPVTIPCGHNYCRICIEGCWDQDVLKRVYSCPQCRET
FTPRPNLRKNNMLAEMVETLKKPAPPPALCYAGPGDVACDVCTGTRKQKALMSCLVCLAC
YCETHLQSHYESPAFKMHKLVKATAQLQEKICSHHGKLLEVYCRTDQQCICYLCTMDEHK
GHDTVSAAAERTEKQRQLGMSQQKVQQRFQEREKELKELQQAVESFKRSAQSAVEDSDQI
FTELIRSIERRSSEVKELIRAQEKAQVSQAEGLLEQLKQEIAELRKRSTELEQLSHTEDH
IHFLQSYQSLSSISISSDLPSIVVRPLQYFGDVSKTVSELREKLEDFLKGEWTKISTTVN
IVDVVLPPEPKTREQLLQYSCQLTLDPNTAHTHLSLSKGNRKVTSTGQVQPYPVHPDRFT
NWCQVLCREGLSGCCYWEVERTGDVVTAVSYKDISRTEKDGGFGNNNKSWSLDCYRGGYC
FRHNNVETKVSGPQSSRVGVYLDHKAGTLSFYSVSDTMTLLHRVQTTYTQPLYPGFYVSG
SAELVKL
NT seq
1644 nt
NT seq
+upstream
nt +downstream
nt
atggctcaacagggagttcaactggaccaggaccagttctgttgttctgtctgtctggat
ctactgaaggaaccagtcaccatcccatgtggacacaattactgtagaatctgtattgag
ggctgctgggatcaggatgttctgaaacgggtctatagctgtcctcagtgcagagagacc
ttcactccaaggcctaatctgaggaaaaataacatgttggctgaaatggtagagacactg
aagaagcctgctccccctcctgctctgtgctatgctggacctggagatgtggcgtgtgat
gtctgcactgggaccagaaagcagaaagccctcatgtcctgtctggtgtgtctggcctgt
tactgtgagactcacctccaatctcactatgaatctcctgctttcaagatgcacaagctg
gtcaaagccaccgcacaactacaggagaagatctgctctcatcatggcaaactgctggag
gtttactgtcgtactgatcagcagtgtatctgttatctgtgtacaatggatgaacataaa
ggccatgatacagtgtcagctgcagcagagaggactgagaaacagaggcagctggggatg
agtcagcagaaggtccagcagagattccaggagagagagaaggagctgaaggagctccaa
caggctgtggagtctttcaagcgctctgcacagtcagcagtggaggacagtgatcagatc
tttactgagctgatccgctccattgagagaaggagctctgaggtgaaggagctgatcaga
gcccaagagaaggctcaagtgagtcaagctgaaggactcctggagcaactgaagcaggag
atagctgagctgaggaagagaagcactgagctggagcagctctcacacacagaggatcac
atccatttcctccagagttatcagtctctctccagtatcagtatatcttcagacttaccc
agcatcgttgtccgtcctcttcagtactttggagatgtgagtaagactgtgtctgaactg
agagagaaactagaagacttccttaaaggagaatggaccaagatctccactacagtgaat
atagtggatgttgtactgcctccagagcccaagaccagagaacagttgttacaatattcc
tgtcagctcacactggacccaaacacagcacacacacacctctctctgtctaaagggaac
agaaaggtgaccagtacaggccaagtccaaccatatcctgtccatccagacagattcacc
aactggtgtcaggttctgtgtagagagggtctgtctggatgctgttactgggaggtggag
aggactggtgatgttgttacagcagtctcatataaagacatcagcagaacagagaaagat
ggtggatttggaaacaataacaagtcctggagtttagactgctatagaggtggttattgt
ttcagacacaataatgttgagactaaagtatcaggccctcagtcctccagagtaggagtg
tacctggatcacaaggcaggtactctgtccttctacagtgtctctgacacaatgaccctc
ctccacagagtccagaccacatatactcagcccctctatcctgggttttatgtctctggt
tctgctgagctggttaaactgtag
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