Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139406344
Help
Entry
139406344 CDS
T10872
Name
(RefSeq) ATP-dependent Clp protease ATP-binding subunit clpX-like, mitochondrial
KO
K03544
ATP-dependent Clp protease ATP-binding subunit ClpX
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
ocla03110
]
139406344
Chaperones and folding catalysts [BR:
ocla03110
]
Heat shock proteins
HSP100
139406344
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_2
AAA
ClpB_D2-small
AAA_5
AAA_14
Mg_chelatase
AAA_22
AAA_7
Sigma54_activat
IstB_IS21
AAA_16
NACHT
Sigma54_activ_2
RuvB_N
nSTAND3
ABC_tran
TsaE
DEAD
ResIII
AAA_18
AAA_28
AAA_23
T2SSE
PduV-EutP
Motif
Other DBs
NCBI-GeneID:
139406344
NCBI-ProteinID:
XP_071004953
LinkDB
All DBs
Position
4:complement(6731562..6763393)
Genome browser
AA seq
623 aa
AA seq
DB search
MSCPCTSAARIFLNSAQRGLSCSRVQLYALSRPGWGFREAPLPRIVRVRSFHETAVCFAS
KDGTTKDGSGDGGKKSISEGKRLAGSSGGSGKGGNQLHCPKCGDPCTHVETFVSSTRFVK
CEKCHHFFVVLSETDSKKGLNKEAESPAEAVKMAFAQKPPPPPKKIYAYLDKYVVGQSYA
KKVLAVAVYNHYKRIYNNIPAGSRQVEVEKQASLTPRELETRRREDEYRFTKLLQIAGIS
PHGNALGASMQQQATQQAPQERRGGDVLDSTHTDIKLEKSNIVLLGPTGSGKTLLAQTLA
KCLDVPFAICDCTTLTQAGYVGEDIESVIAKLLQDANYSVDKAQQGIVFLDEVDKIGSVP
GIHQLRDVGGEGVQQGLLKLLEGTIVNVPEKNSRKLRGETVQVDTTNILFVASGAFNGLD
RIVSRRKNEKYLGFGTPSNMGKGRRAAAAADLANSSEQTDMVAEMEEKDRLLKLVEARDL
IEFGMIPEFVGRLPVVVPLHSLDEETLVRILTEPRNAVIPQYQALFSMDKCELNVTTDAL
RAIARLALERKTGARGLRSIMEKLLLEPMFEVPCSDIMSVELTKDVVLGKSEPQYVRAPA
EEDYDSGIEEENWPRQVDAAANN
NT seq
1872 nt
NT seq
+upstream
nt +downstream
nt
atgtcttgcccatgcacatcggccgcgaggatattcttgaattcagcacagagggggctg
tcttgttctcgggttcagctctatgctttgagcagacctggttggggttttcgtgaagct
cctctacctcgcatagtccgagtgagatccttccatgaaactgcagtatgttttgcctct
aaagatggaacgactaaggatggatccggcgatgggggaaagaagagcatcagtgaagga
aagagattggcgggctcttctggtggatcagggaaggggggtaaccagctgcactgtccc
aaatgtggagacccatgtacacatgtggagacctttgtatcgtcgacacgttttgtgaag
tgtgagaaatgccatcacttcttcgtggttctctctgagacggactctaagaagggcctg
aataaagaagcagagtcgcccgctgaggctgtcaaaatggccttcgcacagaaacctccc
ccgccacccaaaaagatctatgcctacctggacaagtacgtagtgggtcagtcctatgct
aagaaagtgctggcggtagctgtgtataatcactacaagagaatctacaacaacatccct
gctgggagcagacaggtggaggtggagaaacaggcctcgctcactccacgagaactagag
acgagaagacgggaggatgagtacagattcacaaaactccttcaaatagcagggatcagt
ccccatggcaacgccctgggagcctccatgcagcaacaggccactcagcaggctcctcag
gagaggaggggcggagacgtgttagactccacacacaccgacatcaaactggagaagagc
aacatcgtgctgctaggccccaccggatcaggcaagacattgttggcccagaccctggcc
aagtgtctagatgtaccttttgccatctgtgattgtaccaccctgacccaggctggctac
gtgggggaggatatcgagtctgttatcgccaagctgctgcaggatgcaaactactctgtg
gataaagcacagcaaggcatagtgtttctcgatgaggtggacaagatcggcagtgttcct
gggatccaccagctcagagacgtaggaggagagggtgtacaacagggtctgctcaaactc
ctggagggcacgatagtgaacgttccagagaagaactccaggaagttgaggggagagacg
gtgcaggtggacaccactaacatcctgttcgtagcgtcaggggccttcaacggactcgac
agaatcgtcagcagacggaagaatgaaaagtacctgggctttggcacgccctccaacatg
ggtaagggtcgtcgtgcggcggcggcagccgacctggctaacagtagtgaacagaccgac
atggtggcagagatggaggagaaggaccggctgctgaagctcgtggaggcccgggacctc
attgagtttgggatgatcccggagtttgtcgggcgtctgcctgtggtggtgcctctacac
agtctggatgaagagacgctggtccgcatcctgacagaaccacgcaacgccgtcatacca
cagtaccaggccctgttcagcatggacaagtgtgaactgaacgtaaccacagatgctctg
agggccatcgccagactggctctggagagaaagactggagcccgaggcctgaggtccatc
atggagaagcttcttctggagcccatgttcgaggtgccatgttcagacatcatgtctgtg
gagttaaccaaggacgtcgtcttgggcaaatcagaaccacaatacgtcagggctccagca
gaggaggactacgactctggtattgaagaggagaactggcccagacaggtggatgcggca
gctaacaactga
DBGET
integrated database retrieval system
