Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139406348
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Entry
139406348 CDS
T10872
Name
(RefSeq) AP-4 complex subunit epsilon-1
KO
K12400
AP-4 complex subunit epsilon-1
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla04142
Lysosome
Brite
Membrane trafficking [BR:
ocla04131
]
Endosome - Golgi transport
Others
AP-4 complex
139406348
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Ortholog
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Gene cluster
GFIT
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NCBI-GeneID:
139406348
NCBI-ProteinID:
XP_071004961
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Position
4:complement(6831689..6857382)
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AA seq
1163 aa
AA seq
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MSDVVEKTLSALPSLLSLDSQAGAGKLSPSSKLGNLIKGITELTSKHEEEKLIKKELESI
KEQVASPNTTMRQMKEIMVRAIYCEMLGYQASFSYIHAIKLAQQGSVLEKRVGYLAVSLF
LNETDEFLLLLVNTVLKDLQSTNLIEVCMALTVVSQMFPKDMIPAILPVVEEKLTHPKEI
IRRKAVLALYKFYLIAPNQVQHIHSKFRKALCDKDPGVMTASLHIYLQLIKENPESYKDL
TGSMVTILRQVVGGKLPLDFNYHSVPAPWLQIQLLRILAYLGKEDQGTSEMMYDVLEESL
RRAEMNHNITYAILFECVKTIYTVHPKSQLLEKAAECIGNFVLSPKINLKYLGLKALTYV
VQQDANLALPHQMTIIECLDHSDVIIKRETLELLFRITNAQNVTVIVEKMLEFLRLTCDD
YSTIDLVGKVAELAEKYAPDNVWFIQTMNSVFSLGGDVMQPDIPNNFLRLLAEGVDNVED
RQLRLFAVDSYVSLLQGETAKLPQRFLQVISWVLGEYSYLREEESDPGSVMRLLARLLDQ
RHTSTETRSWVLGAMTKLCSSPVSVALARDVCERYSGSLNTVLRQKAQELMILSQDAKLR
ARVLPAEGRLESLEVDSSLSFLDGYVSEALAAGAAPYKSPHQRQEDLVQEKALSLEPYGL
SLPVSLSSCSITDRLTDRRSPTLLSMSSGLSGNSTELSHQEGSTTLKLEGVKRVWGKDGY
LAQQQSAGETPTPLVELPNPLLSPQSPPSQTQKPSSGLEPDQEKRQLASSLFVGLGSHNS
VCLMGRAETAPRHFRRKPRGESSSGASEGSSNSSHSSRSAAVDNLLLSNLLDSTTVASEG
GAATTTTPQQTSQRTLDHTTSNGNPHVEGTEQRVEAGGPLSLIRGNGMVAVVPPTHTQTD
PQTQQDLHSAPALERPRDLPLASHLPAELSGLARSEFTPLCSDQDSSLALSACRVYKEDA
LVLLVFISNNNDSALHQMVLQLTCKELEISCISGSPLKEVKGHSVSVCLHTVVMKRASVQ
VELAGLLSYQRPLGQPQAAQFSLSLSLKHFLRPLTVSTGDYGKMWLSFSHDLKQNLRLVT
TEHQEPLTATLDALKGKLHLHVVDIIGSEGIVACRLLQGPGQGQPCLLHCRVNADSLAVW
LRSPVPELPDSLLYHCQKALTET
NT seq
3492 nt
NT seq
+upstream
nt +downstream
nt
atgagtgatgttgtcgagaagactctgtctgctctcccgagcctcctttcgctagactcg
caggcaggagctgggaaactttctccctcctccaaattagggaatctgatcaaaggaatc
accgaattgacatccaaacatgaggaggaaaaacttattaaaaaggaactggagtctatc
aaggagcaggtggcatctcccaacaccaccatgcgtcagatgaaggaaataatggtgaga
gccatctactgtgagatgctgggttaccaggcgtccttcagttacattcacgccatcaag
ctggcccagcagggcagtgtcctggagaagagagtgggttacctcgctgtatccttgttc
cttaatgaaaccgatgagtttctgctactcctggtgaacacagtcctaaaggatctgcag
agtaccaacctgatcgaggtgtgcatggctctaactgtcgtcagtcagatgtttcccaaa
gatatgatacctgccattctaccggtggtggaggagaaactcacacatccaaaggagatc
atccggaggaaagcagtcctggctctgtacaagttctacctgatcgcacctaaccaggtg
caacacatccacagcaagtttaggaaggccctgtgtgacaaagaccccggagtcatgaca
gcctctctacacatctacctacagctcatcaaggagaacccagagagttataaggatctg
actgggagcatggtgaccatcctgaggcaggtggtaggaggtaaactccccctggacttc
aactaccacagtgttcctgctccctggcttcagatacagctgctcaggatactggcctac
ctggggaaggaagaccagggcactagtgagatgatgtatgatgtactggaggagtcgtta
agaagagcagagatgaatcacaacattacttacgccattttatttgagtgtgtgaagacc
atctatacagttcatccaaagtcacaactgttggagaaagcagcagaatgtatcgggaac
tttgtcctatcgcctaagatcaacctcaaatatctgggtctgaaggctctgacgtacgtg
gtgcagcaggatgctaacctggccctgcctcaccagatgaccatcatagagtgtctggac
cactctgacgtcatcattaagcgcgagacactagagttactcttccgcatcaccaatgcc
cagaacgttacagtgatcgtcgagaagatgctggagttcctcaggctgacctgtgacgac
tacagcactatagacctcgtggggaaagtagcagaactagctgaaaagtatgccccagac
aatgtctggttcatccagactatgaactctgtgttctctctggggggagacgtgatgcag
cctgacatccctaacaacttcctgagactactggctgaaggtgttgataatgtggaggac
aggcagctgaggctatttgctgtggactcctacgtgtccttactacagggggagacggcc
aagctgccccaacgcttcctacaggtcatcagctgggtgctcggtgagtattcctacctg
agagaagaggaatcagacccgggcagcgtgatgagactgctggccagactactggaccag
agacacacctccactgagaccaggagctgggtactgggggccatgaccaagctgtgctcc
agcccagtgtctgtggccctggccagggatgtgtgtgagaggtactctgggtctctgaat
acggtgctccggcaaaaggcccaggaactgatgatccttagccaggatgcaaagctccga
gccagggtactgccagccgagggcaggctagaaagcctggaggtagactcgtccctgtcc
ttcctggatggctatgtgtcggaggcgttggctgctggggcagctccttacaaatctcct
catcagaggcaggaggacctggtccaggagaaagctctgagcctggagccctatggtctg
tccctgccggtcagtctgtcgtcctgcagcatcacagacagactgacagacagacggtct
cctactctgctctccatgagctcaggcctgtctggaaatagcactgagctatctcaccaa
gaaggctctaccactctgaagttggagggggtgaagagggtgtgggggaaggacgggtac
ctggcccagcagcagagtgcaggtgagaccccaacccccctagtggagctgcccaatccc
ctgctgtcccctcagagcccaccctcccagacacagaaaccatcctccggacttgagcct
gaccaggagaaacggcagctggcctcgtcgctctttgttggcctggggtcccacaactct
gtgtgtctgatgggccgagccgagacggcgccccgacacttcagaaggaaacccagaggg
gagtcatcatcaggcgccagcgaaggctcctctaactcctcccactcgtctcgcagcgct
gccgttgacaaccttctgcttagcaacctactggactcgaccactgtggcctcagagggg
ggtgctgctaccaccaccacacctcaacagacctcccaaagaacactggaccataccact
agcaacggtaacccccatgtagaggggacggagcagagagtagaggcaggaggacctctc
tctctaatcaggggaaatggcatggtggctgttgtaccgcccacacacacacagacagac
ccacaaacacaacaagatctacactcagctccagccctagagagacccagggacctccct
ctcgcctcccacctgccagcagagctctctgggctggcccgctctgagttcacccccctc
tgctcggaccaggactccagcctggctctgtcagcctgtagagtgtataaagaggatgcc
ttagtgttgctggtcttcatttccaacaacaatgactcagcgctccaccagatggtgctg
caactcacctgcaaagaactggagatctcctgtatctcaggtagtccgttaaaggaggtt
aagggtcacagcgtgtcggtttgtctgcacactgttgtcatgaagagagcctcagtccag
gtggagctggctgggttactgtcctaccagagacccctgggccagccccaggcagcacag
ttctcactgagcctctctctgaaacacttcctcaggccgttgactgtgtccacaggagat
tatgggaaaatgtggttgtctttctctcatgacttgaagcagaaccttcgactggtaaca
acagaacaccaagaacctctgacggccacactggacgcgctgaagggcaaactacacctc
cacgttgtcgacatcatagggtcggagggcatcgtggcgtgccggctgcttcagggtcca
ggtcagggtcagccatgtctgcttcactgtcgtgtcaacgctgactctctggccgtgtgg
ctgcgctcccctgtccctgagctgccggactccctcctctaccactgtcagaaagccctg
acggagacctga
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