Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139406474
Help
Entry
139406474 CDS
T10872
Name
(RefSeq) non-muscle caldesmon-like
KO
K12327
caldesmon
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla04270
Vascular smooth muscle contraction
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09150 Organismal Systems
09153 Circulatory system
04270 Vascular smooth muscle contraction
139406474
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
ocla04812
]
139406474
Cytoskeleton proteins [BR:
ocla04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Others
139406474
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Caldesmon
Motif
Other DBs
NCBI-GeneID:
139406474
NCBI-ProteinID:
XP_071005196
LinkDB
All DBs
Position
4:14227775..14268293
Genome browser
AA seq
591 aa
AA seq
DB search
MSHAILRRNSSKQGLQNLLKITTQRSVEDAEEVERERRRRTRESFRSMGSSSTLGPEGPS
LDNGALAEDGLYERDLKPSSSSPSMEEDEGFSDWTQRLERRRQQAQRMEELSQATEEQDQ
RPLNGAAKPPTPHTLSGSATPTTSTSCQQRHKAEVEDEEEKKWGRRESERKGREREEEVV
REEREREEEAEKQRQEQMRVLKKREEDQRSDAGEKVKEKRKEVKVSYTSKVVLHTEAKHG
NVNGDTAGEKVTSYMVKTKLRAPRAVVQMAAAEAEEEAILETEAKLEKIRRSHAEKENQE
LEQLKHKQAEAEQELEELKRRREERRQVRKEEERRSREEEQQRLAKEEEEKRRMKEDIER
RRMEAAERMKSLSTSSVDGDEMFSSLSPKGSIYKITERTESLNRSLKKSNSFKKTQPPVL
LAKIDDRLEQYTTAIEYSQEVKATKQGLTDIPMSPEPVSSKKNLFEAGEAWNQSLAKGTP
PKDAESLKVGVADMITQWVKGNPDGTSRSSPSRPADVKSGDVMQKKNMWEIIGETSPGIS
GAVAKGNASGKKYKFVMTAHGKYEKIPVDDDDDENMDEYTNGKADLYHGEY
NT seq
1776 nt
NT seq
+upstream
nt +downstream
nt
atgtcacatgctatcctgagaagaaactccagcaagcaaggtttgcagaacctcttgaaa
ataaccacccagaggagcgtggaggatgcagaggaggtggagcgagagcgtcggcggagg
acccgggagtccttccgcagtatgggcagcagcagtaccttgggccctgaaggcccctca
ctggacaatggggccttggcggaggatggcctgtatgagagggatctgaagcccagcagc
agctctccctctatggaggaggacgagggcttcagtgactggacccagcggctggagaga
cgcaggcagcaggcccagcgcatggaggagctcagtcaggccacagaggagcaggaccag
aggcccctgaatggtgccgcaaagccccccacaccacataccctctctggctcagccacc
cccaccacatccacctcttgccagcagagacacaaggcagaagtggaggatgaagaggag
aagaaatggggaagaagggaaagtgagaggaaagggagggagcgagaggaggaggtggtt
agagaagagagggaaagagaagaggaggcagagaaacagaggcaggagcagatgagagtg
ctgaagaagagagaggaggaccaaagatctgatgctggggagaaggtgaaagagaagcgc
aaagaggtgaaggtctcgtacacatccaaagtcgtcctccatacagaggcaaagcatggc
aacgtcaacggagacacagctggggagaaagtgacatcatacatggtcaaaaccaaatta
agggctcccagggctgtggtacaaatggcagctgcagaggctgaggaggaggccatcttg
gagacagaggccaagctggagaagatccgacggagccatgcggagaaggaaaaccaggag
cttgagcagctcaaacacaagcaggctgaggccgagcaggagctagaggagctgaagagg
aggagggaggagagacgccaggtcaggaaggaggaggagcgcaggagcagagaggaggag
caacagcgtctagccaaggaggaggaggagaagaggaggatgaaggaggacatagagagg
aggaggatggaggcagcagagcggatgaagagcctcagtacctctagcgtagacggagat
gagatgtttagctcgctcagtcccaaaggctccatctacaagatcacagagcgaacggaa
tccttgaaccgatccctaaagaaaagcaacagcttcaagaagacacagccccctgttctc
ctcgccaagatcgatgacaggctggagcaatacaccaccgccatcgagtactcccaggag
gtcaaggcaaccaaacagggcctgacggacatccccatgtcacctgagccagtgtcctcc
aagaagaacttgtttgaggctggagaggcctggaaccagagcctggccaaaggcacacca
cccaaggatgctgagagtctgaaggtgggcgtggcggacatgatcacccagtgggtgaag
gggaacccagatggcaccagcaggagctccccctcaagaccagctgatgtaaaatctggt
gacgtgatgcagaaaaagaacatgtgggagatcattggagaaacatcccctgggatttca
ggagcagtggcaaagggcaatgcatctggtaaaaagtacaaatttgtgatgactgctcat
ggcaaatatgagaagattcctgttgatgatgatgatgatgaaaatatggatgaatacacg
aatggaaaagcagacctataccatggtgaatattga
DBGET
integrated database retrieval system
