Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139406498
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Entry
139406498 CDS
T10872
Name
(RefSeq) peroxisome proliferator-activated receptor alpha-like
KO
K07294
peroxisome proliferator-activated receptor alpha
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla03320
PPAR signaling pathway
ocla04920
Adipocytokine signaling pathway
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09150 Organismal Systems
09152 Endocrine system
04920 Adipocytokine signaling pathway
139406498
03320 PPAR signaling pathway
139406498
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ocla03000
]
139406498
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
ocla03310
]
139406498
Transcription factors [BR:
ocla03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
139406498
Nuclear receptors [BR:
ocla03310
]
1. Thyroid hormone like
1C. Peroxisome proliferator-activated receptor (PPAR)
139406498
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GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
139406498
NCBI-ProteinID:
XP_071005250
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Position
4:15587940..15645329
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AA seq
479 aa
AA seq
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MILPLVPSSVMVDMESHCRPPSPLEDSVLGSPLCGDFIGGMEELQDISQSIDGDAHSSFD
VPEYQSQSSNGSGSEGSTILDALTPASSPSSGVYGAVAGQEEFSSTSLNLECRVCADRAS
GYHYGVHACEGCKGFFRRTIRLKLEYDKCERRCKILKKNRNKCQYCRFQKCLSVGMSHNA
IRFGRMPQSEKLKLKAEIQTGDREVEDPEQADQKTLARHIYEAYLKNFNMNKAKARTILT
GKTSTPPFVIHDMDTLQLAEQTLVAKMVGTAGGHLLEKEAEVRIFHCCQCTSVETVTELT
EFAKSVPGFSSLDLNDQVTLLKYGVYEALFALLASCMNKDGLLVAYGSGFITREFLKSLR
RPFSDMMEPKFQFAMKFNGLELDDSDLALFVAAIICCGDRPGLVNVGHIERMQENIVQVL
RLHLLANHPDDTFLFPKLLQKLSDLRQLVTEHAQLVQEIKKTEDMSLHPLLQEIYRDMY
NT seq
1440 nt
NT seq
+upstream
nt +downstream
nt
atgatcctccccctagtcccgtcctccgtcatggtcgacatggagagccactgccggcct
ccgtcccccctagaggattcggtgctgggcagcccgctgtgtggggacttcatcgggggc
atggaggagctgcaggacatctcccaatccatcgacggtgatgcccacagctcctttgac
gtccctgagtaccagtcccagtcgagtaacggctctggctctgaaggatccaccattcta
gatgctctgaccccagcctccagcccatcgtcgggagtgtatggggcggttgcagggcag
gaagagttctcctccacctctctcaacctggagtgtcgggtgtgtgccgaccgcgcctcc
ggataccactatggagttcacgcctgtgagggctgcaagggtttctttcggcggaccatc
cgcctcaagctggaatatgacaagtgtgaacgtcgatgtaagatcctgaagaagaaccgg
aacaaatgccaatactgccgcttccagaagtgcctgtctgtgggcatgtcccacaatgcg
atccgttttggtcggatgccccagtcagagaagctgaagctgaaggcagagatccagacg
ggggacagggaggtggaggaccccgagcaagctgaccagaagaccctggccaggcacatc
tatgaggcctacctcaaaaacttcaacatgaacaaggccaaagcccgcaccatcctcacc
ggaaagaccagcactccaccatttgtcatccacgacatggataccctccagctggcagag
cagaccctcgttgccaagatggtgggcacggctgggggccatctgctggagaaggaggct
gaggtccgcatcttccactgctgccagtgcacctctgtggagacggtcacagagctgact
gagttcgccaagtctgtccccggcttctccagcctggacctgaacgaccaggtgactctg
ctgaagtatggagtgtacgaggcgctgttcgccctgctggcctcatgtatgaacaaggac
ggcctcctggtggcctacggatcgggattcatcaccagggagtttctcaagagtctgagg
aggcccttcagcgacatgatggaacccaagttccagttcgccatgaagttcaacgggctg
gagctggatgacagtgacctggccctgtttgtggccgccatcatctgctgtggagaccgt
cccggcctggtgaacgttggccacattgagcgcatgcaggagaacattgttcaggtgctg
cggctccacctgctggccaaccacccagacgacaccttcctcttccccaagctgctgcag
aaactgtccgacctccggcagctggtcaccgagcacgctcagttggtccaggagatcaag
aaaacagaggacatgtcactccaccccttgctgcaggagatctacagagacatgtactga
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