Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139406512
Help
Entry
139406512 CDS
T10872
Name
(RefSeq) pseudouridylate synthase 7 homolog
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Brite
Enzymes [BR:
ocla01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
139406512
Transfer RNA biogenesis [BR:
ocla03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
139406512
Prokaryotic type
139406512
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
139406512
NCBI-ProteinID:
XP_071005275
LinkDB
All DBs
Position
4:16371009..16382542
Genome browser
AA seq
644 aa
AA seq
DB search
MADAEPMLVPSPGGEKRACPALEDEVAHSTKRPRVQKDENNKGGYSHKPAQDEAEEPEGE
ETEPLEEEDGEGARLGSGEAFAEMMKHGLTELDVGILKFVSEHKGFSGILKERYSDFVVH
EVNKEGKTVQLDDLSVPEEAEEASVAEQPGSEVFTEEQKHQLEQLQLFKKKEGNVSIEMA
DDTKEKRTLVHKAVKTLYPGLETKTEEREGKKFIVAYHAAGQKALAAPRKHSWPKSRGAF
CHFVLYKENKDTMEAINVLSKFLRMRPNVFSYMGTKDKRAITVQEIAVLKVTAERLSHLN
KCLNNFKLGNFCYKKHPLKLGELRGNHFTVVIRNITGTDDQVQQAMTSLRETGFINYYGM
QRFGTTAVPTHQVGKAILQDNWNEVIDLILKPRPGAEKGYLVKCREEWAQSQDPEAALKK
LPVKRCVEGQLLRGLSMYGKKNIITAFAMIPRNNRLMYIHSYQSFMWNTMVSRRIEAFGL
KAVEGDLVLRGGTAFVLSAAEAETHSIQDVVMPLPGFDVIYPTHHVGKGYREKLSTDNLD
IDNMRHRVRDYSLAGAYRRILIKPSDVSWEVINYDDPRISLVHTDVEKLEDQPPPLFNKE
GKYRALRMEFSLPPSTYATMAIREVLKMDTSIKNQTQLNTIWLN
NT seq
1935 nt
NT seq
+upstream
nt +downstream
nt
atggcggatgcagagcccatgctggtcccttcccccgggggggagaaaagggcctgccct
gccttggaggatgaggtggcccacagcaccaagagacccagagtccagaaggatgagaac
aacaaaggaggatactctcacaagccagcccaggatgaggcagaagagccagagggggag
gagacagagccactggaagaggaggatggagaaggggccaggttaggttctggagaggct
tttgcagagatgatgaagcatgggctcacagagctggatgtggggattctgaaatttgtc
agtgaacacaagggcttctctgggatcctcaaggagaggtactctgactttgtcgtacat
gaggtcaacaaagaaggcaagacagtgcagttggatgatctctcggtccctgaggaggct
gaggaagccagtgtggcagagcagccagggtctgaggttttcacagaggagcagaaacac
caacttgagcagctgcagctcttcaagaaaaaagagggcaacgtgtccatagagatggcg
gatgacaccaaagagaaacggaccctggtccacaaagctgtcaagaccctgtaccctgga
ctggagaccaagacagaggagcgggagggaaagaagttcatcgtggcctaccacgcagcc
gggcagaaagcactcgcagcccccaggaaacactcctggcctaagagccgtggggccttc
tgccactttgtcctttacaaagagaacaaggacaccatggaggccatcaacgtgctgtcc
aagttcctcaggatgaggcctaatgtgttctcttacatggggaccaaggacaagagagcc
atcactgtgcaggagattgcagttctcaaggtcacagcagaaagactgtctcaccttaac
aagtgcctcaataacttcaagctgggaaacttctgctacaagaaacaccctctgaaactg
ggggaactacggggaaatcatttcactgtggtcatcaggaacatcaccgggacagatgac
caggtccagcaggccatgacctccctcagagagacaggctttatcaactactacggcatg
cagcgctttggcaccactgccgtgcccacacaccaggttggcaaagccatcctgcaagac
aactggaatgaagtgatagatctgatcctgaagcctcgccctggagcggagaaaggttac
ctagtgaagtgtcgtgaggagtgggcccagtcccaggacccagaggcagcgcttaagaag
ctacctgtgaaacgctgtgtggagggacagctgctccgaggcctctccatgtacggcaag
aagaacatcatcactgcatttgccatgatccctcgtaacaaccggctgatgtacatccac
agctaccagagctttatgtggaacaccatggtcagcagacgcattgaggccttcgggctg
aaggctgtggagggagacctcgtgctcagaggaggcactgcgttcgtgctgtctgcagcc
gaggcagagacccactctattcaggacgtggtgatgcccctaccagggtttgatgtcatc
taccccactcaccacgtggggaagggctacagggagaagctgagtacagataacctggac
attgacaacatgagacacagggtgagggactactctctggccggggcctaccgacgcatc
ctcatcaaacccagtgacgtcagctgggaggtgattaactatgatgaccctcgtatctct
ctggttcacactgatgtggagaaactagaggaccaacctcctccgctcttcaacaaagag
gggaagtacagggctttgaggatggagttctctctgcctccctccacctatgccaccatg
gccatcagagaggtgctcaagatggacaccagcatcaagaaccagacccagctcaacacc
atctggctcaactaa
DBGET
integrated database retrieval system
