Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139406520
Help
Entry
139406520 CDS
T10872
Name
(RefSeq) CUGBP Elav-like family member 5
KO
K13207
CUG-BP- and ETR3-like factor
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ocla03041
]
139406520
Spliceosome [BR:
ocla03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
139406520
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_ACIN1
RRM_7
RRM_10
Motif
Other DBs
NCBI-GeneID:
139406520
NCBI-ProteinID:
XP_071005285
LinkDB
All DBs
Position
4:complement(17387351..17759764)
Genome browser
AA seq
534 aa
AA seq
DB search
MARFTQTETRRQQQSHQPHPAHTSLVFTGPGAPPTEQPLLLIPHQHQYSQITFPKPMNGS
ESISIHPESGNMKDQDAIKLFIGQIPRNLEEKDLKPLFEQFGKIHELTVLKDRYTGMHKG
CAFLTYCARESAIKAQNALHEQKTLPGMTRPIQVKPADSESRGEDRKLFVGMLNKQQTEE
DVYRLFEPYGVIEECTVLRGPDGNSKGCAFVKFSTHAEAQSAISALHGSQTMPNGSDSLP
PQGASSSLVVKFADTDKERTIRRMQQMVGQFGIFNPAIALPFSTYSTYAHALMQQQAAIM
AASHGGYLTPSVAFPATQIHQMGGLNINGLPHNSMTPVSAEFHQALGLSSPPANITTPNI
VTPIVNGFTGIPHHQPNGHPTVETMYTNGLSPYSTQSPNAADTLQQAFTGVQQYTAIYPA
GTLTPIGQTLPQPSQVIQQQQQREGPEGCNLFIYHLPQEFGDNELMQMFLPFGSVISSKV
FMDRATNQSKCFGFVSFDNPASAQAAIQAMNGFQIGMKRLKVQLKRPKDASRPY
NT seq
1605 nt
NT seq
+upstream
nt +downstream
nt
atggccagattcactcagactgaaacaagaaggcagcagcaatcacatcagccccatccc
gctcacaccagcctggttttcactggacctggggcaccacctaccgaacaaccactacta
cttatccctcaccagcaccagtactctcagatcacatttcctaaacccatgaacgggtca
gaatccatttccattcatccggagagcggcaatatgaaagaccaagatgccataaagctg
tttatcgggcagataccgcggaacttagaggaaaaagacctgaaacctctgtttgaacag
ttcgggaaaatccacgaactgacagttctaaaggaccgatacaccggcatgcacaaaggc
tgtgcgttcctcacctactgcgcccgtgagtcggccatcaaagcccagaacgctctccat
gaacagaaaacactgccagggatgactcgccccatccaggtgaagccggctgacagtgag
agccgtggagaagacaggaagctgtttgtggggatgctgaacaaacaacagactgaggag
gatgtgtaccgcctctttgagccctacggagtcatcgaggagtgcaccgtcctaagaggt
cctgacggaaacagcaaaggctgtgcctttgtaaagttctccacacacgcggaggcccag
tctgcaatcagtgccctccatggcagccagaccatgccaaacggctccgattctctcccc
ccccagggcgcgtcctccagcctggtggtgaagtttgccgacaccgacaaggagcgcacc
atccgccgcatgcagcagatggtcggccagtttggcatcttcaacccagccatcgccctg
ccattcagcacctacagcacctacgcacatgcactcatgcagcaacaggcagccatcatg
gcagcgagccacgggggctacctgactcccagcgtggcctttcccgccacccagattcac
cagatgggggggctcaacatcaatggtctcccacacaactccatgaccccagtgtcggct
gaatttcatcaggcgctgggcctcagctctccaccagccaacattaccactcccaacatc
gtcactcccatcgtcaacggcttcacgggtatcccccaccatcagcccaacggacatccc
accgttgagaccatgtataccaacggtctctcgccctactccacccagagccccaacgcc
gcagacaccctccagcaagccttcaccggagtacagcaatacacagctatctacccagcc
ggcacactgactcccataggtcagactctgcctcagccatcacaggtcatccagcagcag
caacagagagaagggcccgagggctgtaacctgttcatctaccacctgccacaggagttt
ggagataacgaactcatgcagatgtttctgcctttcgggagcgtcatctcctccaaggtc
ttcatggaccgagccaccaaccagagcaaatgtttcgggtttgtgagcttcgacaaccca
gctagcgcacaggcagctattcaagccatgaacggctttcagattggaatgaagaggttg
aaagtccagttaaaacgaccgaaggatgccagccgcccttactga
DBGET
integrated database retrieval system
