Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139406565
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Entry
139406565 CDS
T10872
Name
(RefSeq) semaphorin-6B-like isoform X1
KO
K06842
semaphorin 6
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
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Gene cluster
GFIT
Motif
Pfam:
Sema
PSI
DUF6203
Motif
Other DBs
NCBI-GeneID:
139406565
NCBI-ProteinID:
XP_071005379
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Position
4:complement(19869868..20004545)
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AA seq
916 aa
AA seq
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MVFSFPENPEAGAYWKRGAFQTDEQPFLSVRPEVKRCSNDILLSLCSTAAMATLAPPFFL
LFWLLQLASAAFPEEPGPLNFIPTEVVRRYPVFLGRPHRSSLRQETLHIQRVLKVNRTLY
IGARDDLFRVELDNVAGEEMFYSKKRTWESNKNDIRTCRMKGKHEDECRNFMKVLLSRQG
GLFVCGTNAFNPLCANYTGDTLEMVGETVSGMARCPYDPKHANVALFAEGNLFTATVTDF
LAIDAVIYRSLGDSPALRTVKHDSKWFREPYFVSSVEWGPHIYFFFREMAVEFNYLEKVR
DKLVQVSRVARVCKADLGGSQRVLEKQWTSFLKARLNCSVPGDSHFYFNLLHSTSPVIRM
HGRDIILGVFSTPANSIPGSAVCAFDMEQLAGVFDGRFKEQKSPESIWTPVPDELIPKPR
PGGCAIQGSRFNSSNGFPDEMLNFVKTHPLMDEAVPSLGQSPWIVRTMVRYQLNKMVMDT
EAGPYRNRTVLFLGSSRGTILKFLIVPNWDNTVSGSNVFLEELEAFNPDKCGEDTPQARH
LLSLTLDRVSRSLLLAFPSCVVRVPVAQCQLYSRCMKNCIASRDPYCGWTRGSTCSFLRP
GTRLPFEQDVERGNVSHLGDCDGLLQESFIDEPDGLVSVNLLVVSAVSAFATGAVLSGLA
VCWIMSHRHRHRTRGTGANNRSRKGDKEQNMLGQGRSGSVMSVTRTSGSERTRSHSQADN
PFVTPNGWPKGEIDPGLPTPEQTPLQQKRPPPSMRLPDGDWDQSQTFLNSVGMPCPANSV
IYLSSKFLQERGGRHEDPGNVGPPNTERTRYLVLANHREPHGGQPRTTLRNSAGEYNYPA
TPQDSPDRRRVVSAPSNQMDFGEPPRWTHEGLNYNSNNGVPYHSQRPGLIRANHHGLADF
NHLMGKSVGEHTHSGQ
NT seq
2751 nt
NT seq
+upstream
nt +downstream
nt
atggtattttccttcccggagaatcctgaagctggagcatactggaaaaggggcgcattc
caaactgatgaacagccttttctttcagtgagacccgaagtaaaacgatgcagcaatgac
attctactgagtctgtgttctactgctgccatggcgaccctggccccacccttcttcctg
ctgttttggctcctccaattggccagcgccgcatttccagaggaaccggggcctctgaac
tttatacccactgaagtggtacgacggtacccagtgtttctgggtcggccacatcgttca
tccctgagacaggagacactgcatattcagagagttctcaaggtgaaccggaccctctac
attggagccagagatgaccttttccgcgtggagctggacaatgtggcgggagaggagatg
ttctacagtaagaagagaacatgggagtccaacaaaaacgacatcaggacctgcaggatg
aagggcaagcacgaggacgagtgtcggaacttcatgaaggttttgctgagtcgacaagga
ggtctgtttgtctgtgggaccaacgccttcaatccgctgtgtgccaactatactggagac
acactggagatggtgggagagacggtcagtggcatggcccgctgcccctatgaccctaaa
cacgccaacgtggctctgttcgccgaggggaatttgtttacggccactgtgacggacttc
ctggcaatagatgcagtgatctaccgtagcctgggggacagtcctgcactccgcactgtc
aaacacgactccaaatggttcagagagccctattttgtcagttcagtggaatggggtcct
cacatctacttcttcttcagagagatggccgtggagtttaactatctggagaaggtacga
gacaaactggtacaggtgtctcgggtggcgcgtgtgtgtaaggcggacctggggggctct
cagagggtgttggagaagcagtggacttctttcctgaaagccagactgaactgctccgtc
cctggagactcccacttctacttcaacctgctccactccaccagccctgtcatcaggatg
cacggcagggacatcatcctgggagtcttctccacccccgctaacagtatccctggttca
gcagtgtgtgccttcgacatggagcagctggctggggtgtttgatgggagattcaaagag
cagaagtcacctgagtctatatggacccctgttcctgatgagctcattcccaaaccaagg
ccaggaggctgtgccatccagggctccaggttcaactcatccaatggtttccctgatgag
atgttgaactttgtcaagacccaccccttgatggatgaggctgtaccctcactgggacag
agcccctggattgtcaggaccatggtcaggtaccagctgaataagatggtgatggacaca
gaggctggcccctaccggaaccgaacggtgctcttcctgggctccagccgtgggaccatc
ctcaagttcctgatcgtccccaactgggacaacactgtgtccggcagcaatgtcttcctg
gaggagttggaggccttcaaccctgacaagtgtggggaggacactccgcaggcgaggcat
ctgttgtccctgactctggaccgggtgagccgctctctgctgctggccttcccctcttgt
gtggtcagggtccctgtggcacaatgccagctctactcacgctgtatgaaaaattgcatc
gcctccagggacccctactgtggctggaccaggggaagcacctgctctttcctcaggccc
gggactagactgccgttcgagcaagacgtagaacgcggcaacgtgtcccacttgggcgac
tgtgacggtcttcttcaggagtctttcattgacgaaccagacggtctggtatccgtcaac
ctgctggtcgtgtctgcagtctcagcctttgccacaggggcggtgctgtctggcctggct
gtctgctggatcatgagtcatcgccaccgccaccgcacgcgaggaacaggagccaacaat
aggagccgtaaaggggacaaagagcagaacatgctaggtcaggggcggagtggctcggtg
atgagtgtgacccgtaccagtggcagcgagaggacccggtcacattcccaggcagacaac
ccgttcgtaacgcccaacggctggcctaaaggagagatagacccaggcctacctactcca
gaacagaccccactgcagcagaaacggcctccacccagtatgaggctcccagacggagac
tgggaccagagccagaccttcctcaactcagtgggcatgccctgcccagccaactcagtc
atctacctgagctccaagttcctgcaggagagagggggcaggcacgaggacccagggaac
gtggggccccccaacaccgagcgaacacgttacctggtcctggccaaccaccgggagccc
cacggaggacaacccaggaccaccctgaggaactctgcaggcgagtataactatccagcc
acaccgcaggactccccagaccgcaggagggtggtctcagcccccagcaaccagatggac
tttggggagcccccccgctggacccatgaggggctcaactataacagcaacaacggagtg
ccctaccactcccaacgcccaggcctgatccgggccaaccaccacggcctggccgacttc
aatcacctgatgggaaagagtgtgggcgagcatacccatagtggccagtga
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