Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139406639
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Entry
139406639 CDS
T10872
Name
(RefSeq) methylcrotonoyl-CoA carboxylase subunit alpha, mitochondrial-like
KO
K01968
3-methylcrotonyl-CoA carboxylase alpha subunit [EC:
6.4.1.4
]
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla00280
Valine, leucine and isoleucine degradation
ocla01100
Metabolic pathways
Module
ocla_M00036
Leucine degradation, leucine => acetoacetate + acetyl-CoA
Brite
Enzymes [BR:
ocla01000
]
6. Ligases
6.4 Forming carbon-carbon bonds
6.4.1 Ligases that form carbon-carbon bonds (only sub-subclass identified to date)
6.4.1.4 methylcrotonoyl-CoA carboxylase
139406639
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Gene cluster
GFIT
Motif
Pfam:
CPSase_L_D2
Biotin_carb_N
Biotin_carb_C
Biotin_lipoyl
Dala_Dala_lig_C
ATP-grasp
Biotin_lipoyl_2
BT_MCC_alpha
ATPgrasp_ST
ATP-grasp_3
RimK
NQRA_N
RnfC_N
ATP-grasp_4
Leo1
Motif
Other DBs
NCBI-GeneID:
139406639
NCBI-ProteinID:
XP_071005577
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All DBs
Position
4:25992495..26013147
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AA seq
708 aa
AA seq
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MFAVLKVQTLQGLRIFQQKCIWTKGSVRFASVGQGRIEKVLIANRGEIACRVMRTAKKMG
VRSVAVYSDADRHSMHVAMADEAYNIGPAASQQSYLSMEKVLEVAKRSGSHAVHPGYGFL
SENTEFAEACKQEGIIFIGPPSSAIRDMGIKSTSKYIMSAAGVPIIEGYHGDDQSDEKLQ
AEAVRIGYPVMIKAVRGGGGKGMRISHTAEDFHEQLESARREARKSFNDDVMLVEKFVED
PRHVEVQVFGDQHGNAVYLFERDCSVQRRHQKIIEEAPGPGISEEVRWKLGEAAVRAAKA
VNYVGAGTVEFIMDAQHNFYFMEMNTRLQVEHPVSEMITGTDLVEWQLRVAAGERLPLLQ
DEIELMGHSFEARIYAEDPNNDFLPGAGPLLHLSTPPADEYTRIETGVREGDEVSAHYDP
MIAKLVVWGEDRSAALKKLRYGLRQYNIVGLNTNIDFLLSLSGHPEFEAGNVTTSFIPQH
YEQLFPKPIPPSRATLCQAALGLLLRERASTQTFRDKSNDPFSPFACSNGRRVNILYSRN
MTLQLGETKVEVTVTYNSDGTYSMEIGGEMFQVSGEVETEGQTSFLHCSVNGVKSRPKLV
ILDNTVHLFSMEGSAEVSVPVPKFLAGVSTGAQGGAVAPMTGTIEKVLVKAGDTVQMGDA
LMVMNAMKMEHTIRAPKAGVIKKVFFKEGSQANRHAALVEFEEAAEEE
NT seq
2127 nt
NT seq
+upstream
nt +downstream
nt
atgtttgctgtcctgaaagttcaaaccctacagggtctaagaatatttcaacagaaatgt
atatggaccaaaggatcagtacggtttgcctcagttgggcaaggcaggatagagaaagta
ctcattgccaacagaggagagattgcctgccgtgtgatgcgaacagcaaagaagatgggt
gtgcgctctgtggcagtatacagtgatgcagaccgtcattccatgcatgtggccatggca
gatgaggcctataacattgggccagctgcatcccagcagagttacttgtcaatggagaaa
gtcttggaggttgccaagagatctggatcacatgctgtccatccgggatatggcttcctg
tcagagaacacagagtttgctgaggcgtgcaaacaggagggtatcattttcattggtcct
ccatcatctgccatcagagacatgggtatcaaaagtacatcaaaatacattatgtcagct
gcgggtgttcctatcatcgagggttaccacggagacgaccaatcagatgagaagctccaa
gctgaggctgtcaggatcggctacccagtgatgataaaggctgtgcgtggcgggggtggt
aaaggaatgcgcatttcacacactgctgaagatttccatgagcagcttgagtctgcgaga
cgagaggctcgcaagtccttcaacgatgacgtcatgctagtggagaaatttgtagaggac
cccagacatgtggaggtccaggtctttggggaccagcatggaaatgctgtctacctgttt
gagagggactgcagcgtgcagagaaggcaccagaagatcattgaggaagcaccagggcct
ggtataagcgaggaggtgaggtggaaactgggagaggcagcggtgagagcagccaaagcc
gtcaactatgtgggagcaggcactgtggagttcatcatggatgcacagcacaacttctac
ttcatggagatgaacacacgtctgcaggtggagcaccctgtgtctgagatgatcactgga
actgacctggtggagtggcagctcagggtggctgcaggcgagaggctgcccctcctgcag
gacgagatcgaactgatgggccattcatttgaggccaggatatacgctgaggaccccaac
aatgacttcctccctggggcaggacccctccttcatctgtctacacccccggcggacgaa
tacacacgcatcgagacgggagtcagggaaggagatgaagtgtcagcccactatgacccc
atgatcgctaaactggtggtgtggggagaagaccgatctgctgctctgaagaagctcaga
tacggtctacgccagtacaacattgtaggactcaacaccaacattgacttcttgctgagt
ctgtctgggcatccagagtttgaggcggggaatgtgaccaccagcttcatcccccagcac
tatgagcagctgttccctaaacccatccctccctccagggccacactgtgtcaggctgcc
ctgggcctgctcctcagagagagggccagcactcagaccttcagagacaagtccaacgat
cccttctctccttttgcctgcagtaacggccggagggtgaacatcctatacagtaggaat
atgaccctccagttgggtgaaactaaagtggaagtaacagttacatacaattcagatggg
acttattctatggagattggaggggaaatgttccaggtgtcaggggaggtggagacagag
ggacagacatcattcctgcactgctctgtcaacggggtgaagtctcggcccaaactggtc
atccttgataacacagtacacctcttctctatggagggcagcgcagaggtgagcgttcca
gtgcccaagttcctggctggtgtgagcacaggagcacagggaggagctgtggcacccatg
accgggaccattgagaaggtgctggtgaaggcaggtgacactgtgcaaatgggagatgcc
ttgatggtgatgaatgccatgaaaatggagcacaccatccgagcacctaaagctggagtt
atcaagaaggtgtttttcaaagagggctcccaggccaaccgacacgcagccctggtggag
tttgaggaagccgctgaagaggaataa
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