Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139406644
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Entry
139406644 CDS
T10872
Name
(RefSeq) CD44 antigen-like
KO
K06256
CD44 antigen
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
139406644
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ocla04147
]
139406644
04090 CD molecules [BR:
ocla04090
]
139406644
00535 Proteoglycans [BR:
ocla00535
]
139406644
00536 Glycosaminoglycan binding proteins [BR:
ocla00536
]
139406644
Exosome [BR:
ocla04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
139406644
Exosomal proteins of other body fluids (saliva and urine)
139406644
Exosomal proteins of colorectal cancer cells
139406644
Exosomal proteins of bladder cancer cells
139406644
CD molecules [BR:
ocla04090
]
Proteins
139406644
Proteoglycans [BR:
ocla00535
]
Cell surface proteoglycans
Others
139406644
Glycosaminoglycan binding proteins [BR:
ocla00536
]
Hyaluronan
Cell surface receptors
139406644
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Xlink
Comm
Motif
Other DBs
NCBI-GeneID:
139406644
NCBI-ProteinID:
XP_071005585
LinkDB
All DBs
Position
1:complement(35996314..36027709)
Genome browser
AA seq
431 aa
AA seq
DB search
MWTLLLGVTLGLLASSRSEPAQATVKSRSCSHAGVFHVEGPDRYSLTLDLAKKLCESLGI
TIASREQVIEAHAHGLETCRYGWISNGSTTILRQKAHVNCANNMTGVFFHQVSPEKPFDA
FCFNASELADKNCDAAINPDSTGPESVQVTDAAGEATGPEDGAQPETTINSEPDTQDTTS
APGEKGAESTTEVMEALDTDQPAPTEASQVKSTAWAEGYASEGAATESLSIGMTVEGNGT
QKASPTEHPGVVVTEMEETTVSGMLPSGSDEEGASSMAPSVKEPGEPQGRAREEDLQEKE
VEVGASTQPIPNGKMNPGMGADPTPAGQEISSTPNWLVIVGVLVALVAILLTCFVVVKYK
SWCGQQQTLMITNKDGNEGNGAAASVASSRAQEREQEMVTLMNKEKIQENGNKEEFTAIT
LEESPEKEQLA
NT seq
1296 nt
NT seq
+upstream
nt +downstream
nt
atgtggactttgctcttgggggtcaccttaggattactggcctcctccaggtcggaacct
gctcaagctacagtgaaatcacgtagctgcagccatgccggagtgttccacgtggaagga
ccagatcgctactcattgaccttggatctggccaagaagctgtgtgagagtctgggaatc
accattgccagcagggaacaggtcatcgaggcccatgcccatggcctagagacctgcaga
tatggttggatcagcaacggaagcaccaccatcctcagacaaaaggctcatgttaactgt
gccaacaacatgactggagtcttcttccatcaagtctctccggaaaaaccctttgatgcc
ttctgtttcaatgcatcagagttggctgacaagaactgtgatgcggccatcaaccctgat
tcaacaggaccagagagtgttcaggtgacagatgctgcaggtgaggccacaggccctgag
gatggagcccagccggagaccaccatcaactccgagcctgacacccaggacaccacctcc
gcccctggagaaaagggagcagagagcaccactgaagtaatggaagcattggacacagac
cagcctgcacccactgaggccagccaagtaaagtcaacagcatgggctgagggttatgct
tcagagggggcagccacagaaagccttagcataggaatgacggttgaggggaatgggacc
cagaaagccagccccactgagcaccctggggtggtggtcactgagatggaagaaaccact
gtgtctggaatgttgccttctggctcagatgaggagggggcctcttctatggcaccatct
gttaaagagccaggagaaccacagggccgggccagagaggaggatttacaggagaaggag
gtggaggtaggagcctccacgcagcccattcctaatgggaagatgaatccaggtatggga
gcagaccctactccagctgggcaggagatcagtagcacacccaattggctggtcattgtg
ggagtgcttgtggcactggttgctattctcctcacgtgttttgttgtggtcaagtataag
agctggtgtggtcagcagcagactctgatgatcaccaacaaggatgggaatgagggtaac
ggtgcggcggcgtcagtggctagctcccgcgcccaggagagagagcaggagatggtgacc
ctgatgaataaagagaagatccaggaaaacggaaacaaggaggagttcaccgccattaca
ctggaggagtccccagagaaagaacagctagcgtga
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