Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139406674
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Entry
139406674 CDS
T10872
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 24 isoform X1
KO
K11840
ubiquitin carboxyl-terminal hydrolase 9/24 [EC:
3.4.19.12
]
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Brite
Enzymes [BR:
ocla01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
139406674
Peptidases and inhibitors [BR:
ocla01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
139406674
Ubiquitin system [BR:
ocla04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
139406674
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
139406674
NCBI-ProteinID:
XP_071005645
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Position
4:27909939..27957859
Genome browser
AA seq
2619 aa
AA seq
DB search
METEEEQHMTTLLCMGFPDAVAIRKALRLAKNDINEAVALLTNESPGLGYGYEPMESGPA
PGPSGDGESSGRTGTGGFDPPPAYHDVVESERSNDENGNCSGSSMEFPTTNLYELENRVF
TDHWSIPYKREESLGKCLIAATCLAKQGLADADENCKQFMDRCMHEAFKKLLTSSAVHKW
GTEIHEGIYNMLMLLVELVAERVKRDPIPVGVMGVLTIAFNPDNEYHFKNRMKTCQRNWS
EVFGEEAMFAVSPSNSYQKEPHGWLVDLVNRFGEMGGFTAIQAKLNTQEIEIGCVSALVQ
PLSVCAEYLNSSLVQPMLDPVIHKMITYVQNLEEKDLKDKKLVSIPELLSAIKLLCMRFQ
TTLVTVVDDLRLDTLLRMLKTPHFSTKMNSLKEVTKLIEESTMSKTVKNAIDTDRLLDWL
VENSVLSIALEGNIDQAQYCDRIKGIIELLGSKLSLDELSKIWMIQAGQSSTVIENIHTI
MAAAAVKFNLDQLSHLFVLIQKSWEVESDRVRQKLLSLIGRIGREARSEATTGKVLEVLW
ELAHLPTLPTSLVQQASEEHLAILTDAYAVKETVKRCYIIKCIEDIKKTQTEEEGKTSDI
QSSFLTGSWGKKKAKENSLAKSSQQGSPQAVWVVPALRQLHEITRSFIKQTYQKQDKQSI
IQDLKKNFEIVKLITGSLVVCHRLAVSAAGSNGLAGHTLVDGRYTYQEYLDGHLRFLAFF
LQEASLYLVWNRAKELWDCLVSGPEVCELDREMCFEWFTKGQHDLESDVQQQLFKEKILK
LEPYEITMNGFNLFKTFFENVNLCDHRLKRQGTQLCVERLDLSGMDFIWRIAMETPDEEI
ANEAIQLIITYSYTNLNPKMKKDSVSLHKKFIADCYKRLEAASSALGGPTLTHAVTRATK
MLTATAMPTVATSVQSPSRSTKLVIIERLLLLAERYVITIEDLYSVPRTILPHGASFNGH
PVSLHVTYESTKDTFTLEAHSNETVGSIRWKIAEHLSCPVDNVQIFANDSVLTMNRDQKL
LSQLGFSDEQSLTVKSSGTGTPSGGSSESSASASSSSSAVFNSAYAMEQEKSLPGVVMAL
VCNVFEMLYQLANLDEPRTTLRVRKLLLLIPTDPEVQDALDNFVPKESSVWSHQKTLFTL
GQGSGSRSPSLGSKQQHQPSAASILESLFRSSAPGMSTFRVLYNLEVLSSKLMPTSDDEM
AKTSVKSFCENFLKAGGLSLVVNVMQRDSIPSEVDYETRQGVYSICLQLARFLLVGQSMP
SLLDDDVIREGDTLSSRPFRNAGRPGRQLSLCGTPEKSSYRQMSLSERSSIRVEEIIPAA
RVAIQTMEVGDFTSTLACFMRLTWAAAAGRLDLVGSPQPIRPEHSSLLPLGVRTRVSSTG
SNCSSSSEGEAPPTALHAGICVKQQSVSIKDCIIAREALSLLVTCLQLRTQQLGSFYILP
CVSDFIIDILLGSASGEIRRVACDQLYTLSQSDSSAFPEIVKPNVFLLRVVLASQLPLWS
PTSVMRGVNQRLLSQCTEYFDLRCQLLDDLTSSEMEVLSVSAVAMLEDEISWLDNFEPSW
SSEMETSEADNILQAGHLRLIKTLLSLCGTEKEQLGHSLIQQLLDDFLFRASRIILNTSN
PASSSPPSHDFFPKCSTASSRLAAYEVLVMLADSSVANLQLITRELLSMHHQSDPSLSKE
FDFLPPVDSRSVSGFVGLKNGGATCYMNAVFQQLYMQPGLAEAFLSIEDDTEQPDESVFC
QVQSLFGHLMESKLQYYVPENFWKIFKMWNKELYVREQQDAYEFFTSLVDQLDEHLKKIG
REQIFKNTFQGIFSDQKICKDCPHRYEREETFMALNLGVTSCQSLEISLDQFVRGEVLEG
TNAYYCEKCKEKRTTVKRTCIKSLPSVLCIHLMRFGFDWESGRSIKYDEQIRFPWVLNME
PYTVSGMARQDGGAEGGEGRGEAGGSPRKKVTISENYELVGVVVHSGQAHAGHYYSFIKD
RRGSARGRWYKFNDNVVEEFDMNDETLEYECFGGEYRPKVYDQSNPYPDVRRRYWNAYML
FYQRISDQNSPVLPKKSRVSVMRQEAEDLTLSAPSSPDVSPQSSPRPARANNDRLSVLTR
LVRKGEKKGLFVEKMPARIYQMVRDENLKFMKNRDVYNSDYFNFTLSLASVNATKLKHPA
YQAMARVSLQLAVHFLFHTYLHTKKKLRVDTEEWMTTVEVLLSKSSEACHWMAQYLVGPE
GREITKVCLLECGVREVRVVVAAILEKTLESALHFADSGLDSLTDALLSLLDKDVPENVK
NCNQYFSLFSNFAQRGSGPCHLLLKHSAYRRMLIFLLGPNRQNNQNRRWSPAQAREFLHL
HSTLALMTLHSELNTQHTHDQGVCKLIVSSIPASSRLLPLNADIMASLFSPEGQPYLLEV
MFAVRELSGPLTVLIEMVTYCSFCNEPFSLGVLQLLKTQLETAPPHELKNVFQLLQELLV
VEDPLQTQRLKYAFESEKGLLALMHQSNNVDSSRCYQCVKFLVTLAQKCAPAKDYFKDLS
GHWSWAVQWLQKKMSEHYWTPQSNVSNETSTAKTFQRTISAQDTLAYATALLNEKEPSGS
SNGSDGSPANENADRSLRQGSESPMMLGDSKSDLEDVDP
NT seq
7860 nt
NT seq
+upstream
nt +downstream
nt
atggagacagaagaggaacaacatatgacaactctcctctgcatgggtttcccagatgca
gtggcgatacgcaaggcgctacgcctggcgaagaacgacatcaacgaggctgttgcgctc
ctgaccaacgaaagccccggtcttgggtatggatatgagccgatggagagtggccctgcc
ccaggcccgagtggagacggggagtccagtgggcggaccgggactggagggttcgaccca
cctcccgcataccacgatgtggtggagagcgagaggagtaatgatgagaatgggaattgt
tcaggcagcagtatggagttccccaccactaacctgtatgaactggagaacagagtgttc
actgaccactggtcaatcccctacaagagagaggagtcactgggcaaatgtctgatcgca
gccacctgccttgccaaacaaggtctggcagatgcggatgaaaactgtaagcagtttatg
gacaggtgtatgcacgaggcctttaaaaagctcctgaccagtagtgcggtccataagtgg
gggacagagatccatgaggggatctacaacatgttgatgttactggtggagctggtggct
gagagagtcaaacgggaccccataccagttggcgtgatgggtgtactgactattgccttc
aacccagacaatgagtaccactttaagaaccgtatgaagacgtgccagaggaactggagc
gaggtgtttggagaggaagccatgtttgctgtgtcacctagcaacagctaccaaaaggag
cctcatggctggctggtagatttggtcaatcggtttggagagatgggagggttcactgct
atccaggctaaactcaatacacaggagatagagattgggtgtgtgtctgctctggtccag
cctctatctgtgtgtgcagaatacctcaactccagtctggtgcagcccatgttggatcct
gttatccataagatgatcacctatgttcagaacctggaggagaaggacctgaaagacaag
aagctggtgagcatcccagaactgctgtcggccataaagctgctgtgtatgaggttccag
accaccctggtcactgtggtggacgacctgcgcctggacactctgctacgcatgctgaag
actcctcacttctctaccaagatgaactccctcaaagaggtaactaagctgatcgaggag
agtactatgtctaagacggtgaagaatgccattgacacagacagactgctggactggctg
gtagaaaactctgtcctctcaatagcactggagggtaacatagaccaggcccagtattgt
gatcgaataaaaggcatcattgaattgctgggcagtaaactgtctctggacgagctctcc
aagatctggatgatacaggcaggacagtcgtccacggtgattgagaacatccacaccatc
atggctgcagctgccgtcaagttcaacttagaccagctcagccacctgtttgtccttata
cagaagagctgggaggtagagagtgaccgtgtgaggcagaagctgctcagtctgattggg
aggatcggtagagaggcccgctctgaggctaccacggggaaggtgctggaggtgctgtgg
gagttagcccacctgccaaccctgcccacctccctggtacagcaggcgtctgaggaacac
ctggccatcctcactgacgcgtacgctgtgaaggagactgtcaaacgctgctacatcatc
aaatgtatagaagacatcaagaagactcagactgaggaggagggtaaaaccagcgacatt
cagagctcgtttcttactggctcctggggcaagaagaaagccaaagaaaactcattggcc
aaatcttcacagcagggcagcccccaagcggtctgggtggttccagctctgcggcagctc
catgagatcacacgttccttcatcaaacagacctaccagaaacaggacaagcagagcatc
atccaggacttgaagaagaactttgagatcgtcaaattgatcacaggatctttggtggtc
tgtcatcgactggctgtgtctgcagctgggagcaatggactggccggacacacactcgta
gatggacgatacacctaccaggagtatctagacggccatctgaggttcctggccttcttc
ctccaggaggccagcctctacctggtctggaacagagccaaagaactatgggattgcctg
gtctctgggcccgaagtctgcgagctggacagagagatgtgttttgagtggttcactaag
ggccagcatgatctggagagtgatgttcagcagcagctctttaaagagaagatcctcaaa
ctggagccctacgagattactatgaatggcttcaatctgttcaagaccttttttgagaac
gtcaacctgtgtgaccatcgcttgaaacgccaggggactcaactgtgtgtggagcggctg
gacctgtctgggatggactttatctggcgcatcgccatggaaacgcctgacgaggagatc
gctaacgaggccatccagctcatcatcacctacagctacaccaacctcaacccaaagatg
aagaaggattctgtgtctttacacaagaagttcattgctgattgttacaaacgactggag
gcagccagttcagctctaggaggccccacgttgactcatgctgttaccagggcaaccaag
atgctgacggccaccgccatgccaactgttgctacgtcggtccaatcaccttccaggtcc
accaaactggttatcattgagaggctgctgctattggctgagcgttacgtcatcactatc
gaggatctgtactctgtgcctcgtaccattctacctcacggagcgtccttcaatggccac
cctgtctctctacacgtcacctatgagtccaccaaagacaccttcaccctggaggcccac
agtaatgaaactgtaggcagcatccgatggaagatcgccgagcacctcagctgtccagtc
gacaatgtccaaatctttgccaatgacagcgtgttgacaatgaaccgggaccagaagctg
ctgtcccagctggggttcagtgatgagcagtctctgacagtgaagagctctggcacaggg
acaccctcaggtggcagctctgaatcctccgcctccgcctcctcctccagctctgcggtc
ttcaactcagcctacgctatggaacaggagaagtcccttccaggtgttgtcatggcgttg
gtgtgcaacgtgtttgagatgctctaccagctggccaacctggacgaaccccggacaacc
cttcgtgtgcgtaagctgctgctgctgatcccaacagacccagaggttcaggatgctcta
gataactttgttcccaaagagtccagtgtatggagtcaccagaagacgctgttcaccctg
ggtcaggggtcaggctctcggtctccgtctctgggttctaagcagcagcaccagcccagt
gctgcctccatcttggaatcactcttcagatcctctgctcccgggatgtccaccttcaga
gtcctctacaacctagaggtgttgagttctaagttgatgccaacctcagatgacgagatg
gctaagaccagtgtcaagtctttctgtgagaacttcctgaaagctggaggtctcagtttg
gtggtgaacgtgatgcagcgagactctattccctctgaggtggactatgagaccagacag
ggagtctactccatctgtctacaactggccaggttccttttggttggccaaagtatgccg
tcgttgctggatgatgatgtcatccgagagggcgacacgctgtctagtcggccgttccgt
aatgcggggcgaccggggagacagctgtcgctgtgtggaacgccagagaagagctcctat
agacagatgtctctgtctgaacgctcctccatcagagtagaggagatcatccctgctgca
cgcgtggctatacagacaatggaggtgggggacttcacctcgacgttggcgtgcttcatg
cgtctgacatgggcagcagccgctggccgattggacctcgtcggcagtccacagccaatc
agacctgagcacagctcgctcctcccacttggggtccgcacccgtgtcagcagcactgga
agtaactgcagctccagcagtgagggcgaagcgccacccacagctctgcatgctgggata
tgtgtgaagcagcagagtgtttctattaaagactgcatcatcgctagagaggccctgtca
ctactggtcacctgtctacagctacgaacacagcagctaggctcattctacatcctcccc
tgtgtcagcgacttcatcatcgacatcctgctaggatcagccagtggagagatccggcgc
gtggcatgtgaccagctgtacactctgagccaatccgacagctctgcgttccctgagatc
gtcaaacccaacgtgttcctgcttcgagtcgtcctcgcctcccagctgcctctctggagc
cccacgtctgtcatgagaggagtcaaccagaggttgctgtcacagtgtactgagtacttt
gacctgcgatgtcaactactggatgacttgaccagttcggagatggaggtgttgtcagtg
agtgcggtggccatgttggaagatgagatcagctggttggataactttgagcccagctgg
agctctgagatggagaccagtgaggctgacaacatcctgcaggctggacacctccgcctc
atcaaaacactactgtcactctgtggcacagagaaggaacaactgggtcactctctgatc
cagcagctgttagatgacttcctcttccgagcatcgcgcatcatcctgaacacgtctaac
cccgcctccagctccccccccagccacgacttcttccccaagtgcagtacggccagcagc
agactggcagcctacgaggtgctggtgatgctggcagacagctctgtggccaacctacag
ctcatcaccagagagctgctgtccatgcaccaccagtcagacccctcgctcagcaaggag
tttgacttcctcccgccggtggacagtcgctctgtgtcggggttcgtggggttaaagaac
ggtggagccacctgctatatgaatgctgtgttccagcagctgtacatgcagcctggcctg
gctgaggcctttctgtctatagaggacgacacggagcagccagacgagagtgttttctgt
caggtccagtctctgttcggacacctgatggagagcaagctgcagtactacgtccctgag
aacttctggaagatctttaagatgtggaataaggagctgtatgtaagagagcaacaggat
gcctatgagttcttcacttcactggtggaccagttggacgagcaccttaagaaaatcggc
cgtgagcagatctttaagaacactttccagggaatcttctctgatcagaagatctgcaaa
gactgtcctcaccgatatgagcgagaggagacgtttatggcgctgaacctgggtgtgact
tcgtgtcagagtctggagatctcattggaccagttcgtcaggggggaggtgctggaagga
actaacgcctactattgcgagaagtgcaaggagaagcgtaccacagtgaagcggacctgc
ataaagtccctgcccagtgttctctgtatccatctgatgcgcttcggattcgactgggag
agtggacgctccatcaaatacgacgagcagatcaggtttccctgggtgctgaacatggag
ccctacacagtgtctggcatggctcgtcaggatgggggggcggaggggggagagggccgg
ggggaggcaggtggctcacccaggaagaaggtcactatctctgagaactacgagctggtg
ggagtcgtagtccacagcgggcaggcgcacgctggacattactactccttcataaaggac
cgacggggaagtgctagaggaaggtggtataagtttaatgacaatgtggtcgaggagttt
gacatgaacgacgagacactggaatacgagtgctttggaggagagtaccggcctaaagtc
tacgatcagtctaacccctacccggatgtgcggcggcggtattggaacgcctacatgttg
ttctaccagaggatcagtgaccagaactctcctgttctccctaagaagagcagagtcagc
gtcatgaggcaagaggcagaagacctcacgctttcggcgccctctagcccagacgtcagt
ccccagtcgtcccctcgccctgccagggccaacaatgaccgtctctctgtcctgacccgc
ctcgtacggaagggagagaagaaaggactgtttgtggagaagatgcctgctaggatctac
cagatggtgagagatgagaacctgaagtttatgaagaacagagatgtgtacaacagcgac
tacttcaacttcactctgtcactggcctccgtcaacgcgacaaagctgaagcacccagcc
tatcaggccatggccagagtcagtctccagctagcagtccacttcctgttccacacctac
ctccacaccaaaaagaagctgcgggtggacacagaggagtggatgactacggtggaggtg
ctgctgtctaaaagcagtgaagcctgtcactggatggctcagtacctggtgggacctgag
ggacgagagatcaccaaagtgtgtctgttggagtgtggggtgagggaggtgagggtcgta
gtggcagccatcttggagaagaccttagagagtgcgctccacttcgctgactctggattg
gacagcctgaccgacgcgctcctctccctattggacaaagatgttcctgagaacgtcaaa
aactgcaaccaatacttcagcctcttcagcaactttgctcagagaggctctggtccgtgc
catttgttgttgaaacactcagcgtatcgcaggatgctcatctttctcctcggacccaac
agacagaacaaccagaatcggaggtggagtccagcccaggccagagagttcctgcacctc
cactccactctggccctgatgactctccactcagaactcaacacacagcacacacatgat
caaggtgtgtgtaagctgattgtgagcagtatccctgcctcctcccgcctcctccccctc
aacgctgacatcatggcctcgctcttcagccccgagggacagccttacctgctagaggtg
atgtttgcggtgcgggagttgtcaggccctctgactgtgctgatagagatggtgacgtac
tgctccttctgtaacgaacccttctccctcggagtattacagctgctcaagacccagttg
gagaccgctccaccccatgagttgaagaacgttttccagctgctgcaagagctgctggtg
gtagaggaccctctccagacccagagactgaagtacgcctttgagtcagagaaaggcctg
ctagcattgatgcaccagagtaacaacgtggacagcagccgctgctaccagtgtgtcaag
ttcctggttaccctggcacagaagtgtgctcctgctaaggactattttaaagatctgtct
ggtcactggagctgggcagtgcagtggctgcagaaaaagatgtcagaacactactggact
cctcagagcaacgtgtccaatgagacgtccacagccaaaacgttccagcgcaccatctca
gcccaggacacgctggcctacgccacagcactgctcaacgagaaggagccatctggcagc
agcaacggctctgacggcagcccagccaacgagaacgcagaccgcagcctccgacagggt
tccgagtctcccatgatgctcggtgattcaaagagtgatctggaggatgtcgacccttag
DBGET
integrated database retrieval system
