Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139406715
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Entry
139406715 CDS
T10872
Name
(RefSeq) SERPINE1 mRNA-binding protein 1-like isoform X1
KO
K13199
plasminogen activator inhibitor 1 RNA-binding protein
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ocla03041
]
139406715
Spliceosome [BR:
ocla03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
139406715
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HABP4_PAI-RBP1
IHABP4_N
Motif
Other DBs
NCBI-GeneID:
139406715
NCBI-ProteinID:
XP_071005769
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All DBs
Position
4:complement(30095214..30103759)
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AA seq
428 aa
AA seq
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MPGHMQEGFGCAIANRFDQLFDDESDPFELLKEAENKKKEAPVPGAAKTAAQAAKLQKKE
SQKDRKMVPADKKDEPLAPVPLKKDGPGPRRMGRRPEGQGPASGPPREFQGEGRPPTDRP
PRTDRRPPRRFERPPGGEEKPGEGGEFSVEKPIGERPMRGRGGGGGRGRGLGSRGRGMGR
SDGFDARGKREFDRHSGNDRSSQKGEEKRGGSGSHNWGTVKDEMGELDQSNVTEETPEGE
EHLPADSENKENEVGEPKEVEPKEMTLDEWKAQQDKEKTKVEFNIRKANEGADSQWKKGY
VLHKSKDEKKDDTLIEAAVEAEGVVPKIEDDHHFRKPANDITAQLEINFGDLGRPSRGRG
GPRGGRGGRGRGEGRGEFRGEFREREPREPRERDGGAPTRPARGGRTDKPSGVIVPNVDD
PEAFPALA
NT seq
1287 nt
NT seq
+upstream
nt +downstream
nt
atgcccggacatatgcaagaaggtttcggctgcgccatagccaaccgattcgaccaacta
tttgacgacgagtcggacccgttcgagctgttgaaggaggcggagaacaagaagaaggag
gctcctgtccctggtgccgccaagaccgcagcccaagccgccaaactccagaaaaaggag
tcccagaaagatagaaagatggtccctgctgataagaaagatgagcctctggcacccgtg
cctctgaagaaagatggacctggtcccaggaggatgggtcgcaggcctgagggtcagggc
ccagccagtggaccgccccgtgagttccagggcgagggccgcccccctacagacagaccc
ccccggactgacagacggccaccacgccgtttcgagaggccccccggcggagaggagaag
cctggcgagggaggagaattctctgtggagaagcccattggggaaaggccgatgagagga
cgtggtggtggcggcggcaggggcaggggattgggcagcaggggccgaggcatgggcagg
agcgacggcttcgatgccagaggaaagcgtgaatttgacagacacagcggcaacgatcga
tccagccagaaaggtgaggagaagcgtggaggaagtggatctcacaactggggcaccgtc
aaggatgagatgggcgagcttgaccaatcaaacgtgaccgaggagacccctgagggagag
gagcatctgcccgccgactctgagaataaggagaatgaggttggtgaacctaaggaagtg
gaacccaaggagatgactctggatgaatggaaggcccagcaggacaaagagaaaaccaag
gtggagttcaacatccgcaaggccaatgagggagccgacagccagtggaagaaaggatac
gtgctgcacaagtccaaggacgagaagaaagatgatactctgattgaagctgcagtggag
gctgagggagtcgtccctaagatagaggatgatcaccacttccggaagccggccaatgac
atcacagcccagttggagataaactttggggacctgggccgccccagccgtggtcgtggt
ggaccccgtggtggcagggggggccgtgggcgtggggagggcagaggagagttccgggga
gagttccgcgagcgtgagcccagagagccccgcgagcgtgatggtggagcacccaccagg
ccggcccgcggaggccggactgacaagccgagcggggtgatcgtgcccaacgtggatgac
cccgaggccttcccggccctggcctaa
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