Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139406727
Help
Entry
139406727 CDS
T10872
Name
(RefSeq) volume-regulated anion channel subunit LRRC8D-like
KO
K22038
volume-regulated anion channel
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ocla04040
]
139406727
Ion channels [BR:
ocla04040
]
Chloride channels
Chloride channel, volume-regulated (VRAC)
139406727
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pannexin_like
LRR_8
LRR_4
LRR_14
LRR_1
LRR_R13L1-DRL21
LRR_5
LRR_9
LRR_EndoS
Motif
Other DBs
NCBI-GeneID:
139406727
NCBI-ProteinID:
XP_071005797
LinkDB
All DBs
Position
4:31903050..31917849
Genome browser
AA seq
843 aa
AA seq
DB search
MFTLTEVAALNDIQPTYRILKPWWDVFMDYLGVVMLMLAIFSGTMQLTKDQVVCLPVLEP
TPEDPSTFTTPQPEEGFGSGSGNGGSRVTLAAAPLMINDLPDSVIHFTQFGGVGQQPPPT
GVRTNLDFQQYVFVNQMCYHVALPWYSKYFPYLALIHTIVLMVSSNFWFKYPKTSSKIEH
FVGILGKCFESPWTTKALSETACEDSEENKQRLTGAHSLPKHFSTSSEEGSPNQSTPMLA
KSGVKFTADKPVIEVPCMTILDKKDGEQAKALFEKVRKFRAHVEDSDLIYKLYVAQTVIK
TVKFILILCYTMTFVASIDFDHVCEPDIKHLTGYSKFQCTHNMAFMLRKLLVSYISLVCI
YGLICIYTLFWLFRRPLKEYSFEKVREESSFSDIPDVKNDFAFLLHMVDQYDQLYSKRFG
VFLSEVSENKLREISLNHEWTFEKLRQHVTRNAQDKLELHLFMLSGLPDAVFDLTDLEIL
KLELIPEARITAKISQMINLQELHFYHCPAKVEQTAFSFLRDHLRCLHVKFTDVAEIPTW
VYLLKSLRELYLVGNLNSENNKMIGLESLRDLRHLKILHLKSNLTKVPTNITDLSPHLIK
LVVHNDGTKLLVLNSLKKMMNLAELELHNCELERIPHAIFSLTNLQELDLKSNNIRTIEE
VISFQHLNRLICLKLWHNKIITIPLSISHIKNLESLYLSHNKLESLPVPLFNLLKLRYLD
VSHNSIVVIPLEIGFMQNLQHFAITGNKVEVVPKQLFKCTKLKTLCLGHNCISVLPEKIS
NLVQLTNLELKGNCLDRLPAQLGQCHLLRRNCLVVEDHLFDSLPLDVKESINQEANVPFA
NGV
NT seq
2532 nt
NT seq
+upstream
nt +downstream
nt
atgtttactctcacagaggtagccgccctgaatgacatccagccgacctatcggatcctg
aaaccatggtgggacgtatttatggactacctgggcgtcgtcatgctgatgctggccata
ttttctggaaccatgcaattaaccaaagaccaggtggtttgccttcccgttctggaacca
actccagaggaccccagcaccttcacgacaccgcagccagaggaggggtttgggtcaggg
tcagggaacggaggaagcagggtgactctagccgcagcgcccctaatgattaatgatcta
ccggatagtgtcatccacttcacacagtttggtggtgttggacagcagcctccgccaaca
ggcgtcaggacaaacctggactttcagcagtatgtttttgtcaatcagatgtgctaccac
gttgccctgccgtggtactcaaaatacttcccataccttgctctcatacacaccatcgtc
ctcatggtcagcagtaacttttggttcaaatatccaaagactagttcaaaaatagagcat
tttgtggggattctggggaagtgttttgagtctccttggacgaccaaggcattgtccgag
actgcatgtgaggactcggaggagaataagcaaaggctcactggtgcccattccctacca
aaacatttctcaaccagcagtgaagagggaagtcctaaccagtccaccccgatgctggct
aaatctggggtcaagtttactgctgataagcctgttattgaagtgccatgcatgaccata
ctggacaagaaagatggagagcaggccaaggccttgtttgaaaaggttaggaagttccgt
gcccacgtggaagacagtgatttgatctacaagctctatgttgctcaaactgtgatcaaa
accgtgaagttcattttgatcttgtgttacacaatgacatttgttgcttcaattgacttt
gaccatgtgtgtgagcctgacataaaacatttaaccggatactctaaattccaatgcaca
cataacatggcattcatgttaaggaagctgcttgtcagctatatttccctcgtctgtata
tatggtctaatctgtatatacactctcttctggctgtttcgacgacctctcaaggagtac
tctttcgagaaagtcagagaggagagtagtttcagtgacattcctgacgtgaagaacgac
tttgcgtttctcttgcacatggtcgatcagtatgaccagctgtactcgaagcgttttggc
gtcttcctctctgaagtcagcgagaataaactgcgagagatcagcttgaatcacgagtgg
acctttgagaaactgagacagcatgtaacccgcaacgctcaggacaaactggagctccat
ctcttcatgctgtcaggtctgccagatgctgtcttcgatctgacggatttggagatccta
aagctggagctgatcccagaggccaggataacagccaaaatctcccagatgatcaacctt
caggagcttcacttttatcactgccctgccaaagttgagcagaccgcgttcagtttcctt
cgtgaccacctccggtgccttcatgtcaagtttacagacgtagctgagatccccacctgg
gtgtacctgttgaaaagtctgagggagctatacttggtcgggaatctgaattctgaaaac
aacaagatgattggtttagaatctctcagagacctgagacatctgaagattctgcatcta
aaaagcaacttgacgaaggtcccaaccaacataacagatctctctccacacctgatcaag
ctggttgtacataatgacggtactaaactcctggtactgaacagtttgaaaaaaatgatg
aacctagctgaactggagcttcacaattgtgaactggagaggattccccatgctattttc
agtttgaccaacctgcaagagctggacctgaaatccaacaacattcgcaccattgaggag
gtcatcagcttccagcacctcaataggctgatctgccttaaactgtggcacaataaaatc
atcaccattccattgtccataagccacatcaaaaaccttgagtccctctacctttcgcac
aacaaacttgaatctctgcccgtacctttgtttaacctgctgaagctgaggtatctggac
gttagccacaactccatagtggtgatccctctggagatcggcttcatgcagaacctccag
cactttgccattacaggaaacaaggtggaggtggtacccaagcagctgttcaagtgcacc
aaattgaagacactatgtctgggacacaactgtatctctgtccttccagagaagataagc
aatctggtgcagctaacaaacctggagcttaagggaaactgtctggaccgcctgccagcc
cagcttggccagtgtcatctcctccgcaggaactgcctggtggtggaggaccacctcttt
gactcactccccctagacgtcaaggagagtatcaatcaggaagccaacgttccctttgct
aatggggtgtga
DBGET
integrated database retrieval system
