Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139406754
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Entry
139406754 CDS
T10872
Name
(RefSeq) trafficking protein particle complex subunit 8-like isoform X1
KO
K20305
trafficking protein particle complex subunit 8
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ocla04131
]
139406754
Membrane trafficking [BR:
ocla04131
]
Endosome - Golgi transport
Tethering complex
TRAPP complex II
139406754
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TRAPPC-Trs85
Ig_TPPC8_4th
Ig_TPPC8_3rd
Ig_TPPC8_C
Ig_TPPC8_2nd
TRAPPC9-Trs120
SNAP
Motif
Other DBs
NCBI-GeneID:
139406754
NCBI-ProteinID:
XP_071005855
LinkDB
All DBs
Position
4:complement(35247963..35334321)
Genome browser
AA seq
1516 aa
AA seq
DB search
MAQCVQSVQEFIQDSFVPMVAVLCSEDAEKVTRKNNLNFSELLRPFCRLTSEGHMRDPSN
QVQVVKNLRISVNNVVTRPSVPSSGVPGHAHRRLLSEVVLTCQPAEGGVANVITAGDYDL
NISDRSLKASVPWYSDWRDTLTELSTSKHYTATTPWFEAYRESFLQSMPASDHEFLNHYL
ACLLVVSSSEAVPVEKFLKLSQEQHRIQHSGEYTNPKWFIPNTLKYYVLLHDMSQGDEQR
ADSVYEDMKQRYGAQGCYLLKVNSRTAAAGADEQIPDPWSQYLHKSSLQSQDQYEDPAPV
VVNNTAVENNVGGTSEVDGHDSEEKDGVLVNSLDNTHPLQLDTPSDTPGSLDALRAVAVE
TKPPPLATGVAAATSHGACLTLNDHDRIRLFIQEFTFRGLLPHIEKNIRQLNDQLVSRKG
LSRSLFSATKKWFGGGKVPEKSIAELKNTSGLLYPPEAPELQIRKMADLCFLVQLYDLAY
SCYHTAKKDFLSDQAMLYAAGALEMAAVSAFLQVGAPRPYPAHYMDTAIQTYRDVSKNMV
LAERCALLSAEVLKSQAKYSDAATLLIKMTSEDSDLRSALLLEQAAHCFINMRNPMVRKF
AFHMILAGHRFSKAGQKRHALRCYCQAMQVYKGKGWSLAEDHINFTIGRQSFTLRQPENA
VTAFRHILTNDSQQTSTQQGAFLREYLYVYKNVTGACEVALPQLPLPCINSSATRVYFGH
ERRLAEGEKQAATHVSLDQEFDRDLAAMWQDLEEQVVAAAKRGVVPATFQSTQCCLNSQT
DNLRFPLAVVEEPIIVEVVFRNPLKVPLVLSDLSLLWKFTLKDFNRPQPQEDSVGDAVPI
SNEKEASVPRTSQKDDVIATEVIPEFYLSPEETKLARLKLLPHQTGQLNILGLVYNLAST
SSTGDTTINSTAASQTEGPSAAEGTSVRGRQDLEIQGPRLNQTKEEKTSVSHGPDRRLDP
TITPPMPLLEVFFLQFPTALLCGEIRKAYVEFCNMSRVTLCGLRVASTHPDFFTFGSSSL
ATPLTPLSPTSFENCSAYKTLATPPGATPGFVAAVTLVSEGDFGSGTRLRGGGVSGAGTG
GKGITEIPLGEGTLKPGESTQLPMWLRGPDQEGVHEIHFLFYYESAEKGGKISHRVLRHT
VFICASRSLSVRATACRSNTLPEEEEERNGSMLVFVDVENINSSEAGVREFHIAQVSSSS
KQWRLHKCINPAEDKDCKLTSRERGKLCFRATRCKPLQVTLKAAEKYTFADLSLGNELII
TSTTPCADFFFRRCQPLESLKPPVAMETQGRHSRSQGVGHGGGDKDIAGVVRKCNEVDLD
IIILWKAFVVEDNKQVILEGQLHVALQTIDKEACSLTQKEEAQEMVLLKFKPELPPPMTR
PSMEQLSHLIKTNLQYPESYSHPFNQKSLCMVPVTLTLSNCSLAQVDVIIDLRHKATSPE
SLEVHGSFTWLGQTQFKMQLGAQEVMRVQLRACFLHAGVYNLGTPRVFAKLADQGAMCET
SQQTATPALIIIINST
NT seq
4551 nt
NT seq
+upstream
nt +downstream
nt
atggctcagtgcgtacagtcggtgcaggaattcatccaggactcgtttgtcccgatggtg
gcggtcctgtgcagcgaagatgcggagaaagtgactcgtaaaaacaacctgaatttctcg
gagctgctaaggcccttctgccggttaacatccgaaggtcacatgagggatcccagcaac
caggtgcaggtggtgaagaaccttcgcatcagtgtcaacaacgtggtgacacgcccttct
gtcccttcctccggtgtccctggccatgcccaccgacggctgctcagcgaggtggtgttg
acatgccaaccggctgagggtggtgttgccaatgtcattactgctggtgactatgatctc
aatattagtgatcgctctcttaaagctagcgtcccctggtacagtgactggagggacaca
ctaacggaactcagcacctccaagcactacacagccacgactccctggtttgaggcgtac
agagagagcttcctccagtccatgcctgcctccgaccatgagttcctcaaccactacctc
gcctgtctgttggtggtgtcgtccagtgaggctgtaccagtggagaagttcctcaagctg
tctcaggagcagcacaggatccagcacagcggcgagtacaccaaccccaagtggttcatc
cccaacacactcaagtactatgtcctacttcacgacatgagccagggagacgaacagagg
gctgactctgtgtatgaggatatgaagcagaggtatggtgctcagggttgttacctgttg
aaggtcaactctcgtacggcggcagcgggagcagacgaacagatcccagacccatggagc
cagtaccttcacaagagtagcctgcaaagccaggatcagtatgaggatccagcccctgta
gtggtgaacaacacggctgtagagaacaacgtaggtggaacatccgaggtggatggacac
gactcggaagagaaagatggagtcttggtcaacagtctggacaacacccatcccctccag
ctggatacacccagtgacacgcccggtagcctcgacgctctcagggccgtcgccgtggaa
accaagccaccgcccctcgccacgggagtggcagcggccaccagccatggggcgtgcctc
acgctgaacgaccacgaccgcatcagactgttcatccaggagtttaccttcaggggacta
ctgcctcacatagagaagaacatcagacagctcaatgaccagctggtctccaggaaaggc
ttgagtcgctctcttttctctgccactaagaagtggtttggaggagggaaagttccagag
aagagtatcgctgaactgaagaacacttctggcctcctctatcccccagaagcccctgag
ctgcagatcaggaagatggctgacctttgtttcctggttcagctctatgacctggcgtac
agctgctaccacacggccaagaaggatttcctctctgaccaggccatgctctatgccgct
ggggcactggagatggcagcagtgtctgcgtttcttcaagttggagctccaaggccatat
ccagcacactacatggacacggcaatacagacctacagagatgtgtccaagaacatggtt
ctagctgaacgttgtgctctgctcagtgctgaggtactgaagagtcaggccaagtactct
gatgctgctaccctcctcatcaagatgaccagtgaggactctgacctgcgttctgccctc
ctattggagcaggcagcccactgtttcattaacatgcggaaccccatggtcaggaagttt
gccttccacatgatcctggcaggacaccgcttcagcaaggcagggcagaagcgccatgcg
ttgcggtgttactgccaggccatgcaggtgtataagggtaaaggctggtccctggctgag
gaccatatcaacttcactattggccgccagtccttcaccctgcgccaaccagagaacgct
gtcacagctttcagacacatcctcaccaatgacagccagcagacctccacacagcaggga
gccttcctccgggaatacctctacgtctacaagaatgttacgggggcatgtgaggtggcg
ctaccccagctgcccctaccctgcatcaacagctctgccaccagggtctacttcggccat
gaacgccgcctggcagagggtgagaagcaggcagccacccacgtgtccttggaccaggag
tttgaccgggacctagctgccatgtggcaggacctcgaggaacaggtggttgccgccgca
aaacgtggggtcgttccagcaacgtttcaatccacccagtgctgcctgaacagtcagacg
gacaacctccgcttcccgcttgctgttgtggaggaacccatcatagttgaggtggtgttc
cggaaccctctaaaggttccactggttctctctgacctctcgctgctctggaagtttaca
ctcaaagacttcaatcgaccgcaaccgcaggaagactcggtcggagatgctgtgcccatc
agcaacgagaaggaggccagcgttccgaggacttcacagaaagatgatgtcattgccaca
gaagtcatcccagagttctacctgagccctgaggagactaaattggctcgtctgaagctg
ctgccccaccagacaggtcagctcaacatcctgggtctagtctataatctggcctccacc
tcctctactggagacactactatcaacagcaccgcagcctcacagaccgaaggtccctca
gcggcagaggggacatcagttcgtggtcgacaggacctagagatccagggaccgcgtttg
aaccagaccaaagaggagaagacctcagtcagccacggtcctgaccgacgtcttgacccc
accatcacccctcccatgcccctgctagaggtattcttcctccagttccctactgccctg
ctatgtggtgagatcagaaaggcttacgtggagttctgtaacatgagtcgcgttaccctg
tgtggcctgcgggtggcgtccacgcacccagacttttttacctttggaagctcctcctta
gccacacctctcacccccctcagccccacctcttttgaaaactgctccgcctacaagacc
ctggccacaccccctggcgccacgcccgggtttgttgctgcggtgacactggtttcagag
ggggactttgggtctgggacacggttgaggggaggaggagtgtccggtgcgggtacgggg
ggtaaagggataacggagatccctctaggagaggggacactaaagcctggagaatctacc
cagctgcccatgtggctgagaggaccggaccaggaaggagtccacgagatccacttcctg
ttctactacgagagcgccgagaagggaggcaagatcagtcacagggtgttgcgtcacact
gtatttatttgtgcgagtcgttcgctgtctgttcgggccacagcttgtcgtagtaacaca
ctacctgaggaggaggaggagaggaacggcagcatgctggtctttgttgacgtggagaac
atcaattcgagcgaggctggggtgcgtgagtttcacattgcacaggtctctagcagcagt
aaacagtggagactacacaagtgtataaacccagcagaagacaaagactgcaaactcacc
agcagagagagaggaaagctgtgcttcagagcaacacgatgcaaacccctgcaagttacc
ttgaaggcagcagagaaatacacatttgcagacctgagccttgggaatgaactgatcatc
acctccaccactccatgtgcagatttcttcttccggaggtgtcagcccttggagtctctg
aaacctcccgttgccatggagacacaggggagacattccaggagtcagggggtggggcat
gggggcggggacaaggatatagcgggcgtggtcaggaagtgtaacgaggtggacctcgac
atcatcatcctctggaaggcatttgttgttgaggacaacaagcaggtgatcctagaggga
cagcttcatgtggccctacagaccatcgacaaagaggcctgctctttgacacagaaagag
gaggctcaggagatggtgctgctgaagtttaaaccggagctgccgcctccaatgacacgg
ccctctatggaacaactctcccacctcatcaagaccaacctgcagtacccagagagctac
agccatcccttcaatcagaagagtctgtgtatggttccagtcactttgactctgtctaac
tgctccctggctcaagttgatgtcatcattgacctacgccacaaagctacaagccctgag
tctctcgaggtgcatggttcgtttacatggctgggccagacacaattcaaaatgcagttg
ggggcacaagaagtgatgcgagtgcagctgcgagcctgcttcctgcatgcgggcgtctat
aatctgggaacgccacgggtctttgccaaactggcggaccagggagccatgtgtgagacc
agccagcagacggccacgccagcactcatcatcatcatcaacagcacctga
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