Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139406816
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Entry
139406816 CDS
T10872
Name
(RefSeq) thrombopoietin receptor isoform X1
KO
K05082
thrombopoietin receptor
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla04060
Cytokine-cytokine receptor interaction
ocla04081
Hormone signaling
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04081 Hormone signaling
139406816
04060 Cytokine-cytokine receptor interaction
139406816
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04050 Cytokine receptors [BR:
ocla04050
]
139406816
04090 CD molecules [BR:
ocla04090
]
139406816
Cytokine receptors [BR:
ocla04050
]
Interleukin receptor families
Prolactin receptor family
139406816
CD molecules [BR:
ocla04090
]
Proteins
139406816
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EpoR_lig-bind
LIFR_N
fn3
LIFR_D4
IL6Ra-bind
CRLF2_D1
Ig_RIMBP2
ATP_sub_h
Motif
Other DBs
NCBI-GeneID:
139406816
NCBI-ProteinID:
XP_071005971
LinkDB
All DBs
Position
4:40732295..40737025
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AA seq
651 aa
AA seq
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MDLNLCVWLWTILCWVDVLGTRDGAVPHLSKKDVLLLADDANPKCFTRTQYDFTCFWEMP
DNKSYDFFYSNDDREEKRCNLILQRTEEGNVLHVCSFPPSEVFLFTFTHIRVMEGSSNYT
LYARTVSVEDQVLLDPPVNVSLHPTGQTGQIQVEWHTPREWENNMQYVIRYSSQSLRERT
ELIKPLRSQIHSLVSLAPGEVVSVQLRVKPNGYSEKETSGHWSDWSVPKTAMVPQSAADI
SLLCHTSDLQNITCQWNGQAYRDDTYTIYYKLGPSESEDWRECMQNENISYHCSFHGAES
SEIRVKLSAGPATPRRTFYTEPFRLNNSIQTAPPGRLRGQWEKGRLCLKWDTPLLALSVH
LMYQHRYQPREETVWKLVILPGPETSTCLDIQTGVQYYIQVRARPNGSVYAGYWSDWSPR
LTVDTPSDIGALISCIPLMMLVGSVVFISMFSRYLSKLKQYLWPPVPNLDKVLHGFLTDI
NGQTWDPPFNIKQCSEETPACVVEIMSEREAPGRGMLPLLLSPEQGTSGGEEESLPTLVL
EVSPDYVTLTTDDVIPRLGGNEYVYDGEVGAESQSLWVGGEEVLQVRCHCSFPRSSSFPS
SSSTTDILNHSYLLLAEHPINRLDYPGQQCAPQGSRVYVNLEDTSSANTNA
NT seq
1956 nt
NT seq
+upstream
nt +downstream
nt
atggatctcaatctctgcgtctggctctggaccatattatgctgggtggatgttctgggg
accagggatggggctgtccctcatctgtcaaagaaagatgttctgctgttggcggatgat
gcaaatccaaagtgttttaccaggacacagtatgacttcacctgtttctgggagatgcca
gacaacaagtcttatgacttcttctatagtaacgatgatcgggaggagaagaggtgtaat
ctgattctccagaggacagaggaggggaacgtccttcatgtctgctccttccctccctct
gaggtcttcctgttcaccttcacacacatcagagtgatggagggcagctccaactacaca
ctatacgcacgcacggtcagcgtcgaggaccaggttctcctggacccccctgtgaatgta
tcccttcacccgacagggcagactgggcagatccaggtggagtggcacacacccagagag
tgggagaacaacatgcaatatgtgatacgttactcctcccagagcctgagggagagaact
gaactgataaagccattgaggtcccaaatccacagcctggtctctctggcgccaggggag
gtggtcagcgtccagctgagggtcaaacccaacggctacagcgagaaagagaccagtggt
cattggagcgactggtcggtccccaaaactgccatggttcctcagagtgcagctgatatc
tcattgttgtgccacacttcggacctgcaaaacatcacctgccaatggaatgggcaggcc
tacagagatgatacctacaccatatactacaagctgggacccagtgaaagtgaggactgg
agagagtgtatgcagaatgagaacatctcctaccattgcagtttccatggagcagagtcc
agtgagatacgggtcaaactcagcgctggtcctgctactcccaggcggaccttctacact
gagcctttcagactcaacaacagcattcaaacagcccctcctgggaggctgaggggacaa
tgggagaagggcaggctgtgtctgaaatgggacacacccttattggccctgtctgtccac
ctgatgtaccagcaccgctaccagcctcgagaggagactgtctggaagctggtgatcctg
ccgggcccagagaccagtacctgtctagacattcagactggagttcagtactatatccag
gtcagagccagacccaacgggtcagtctacgctggctactggagcgactggtcaccccga
ctcactgtggacacgccctcagacataggtgccctcatctcctgcatccctctcatgatg
ctcgttggatcagtcgtctttatctccatgttctccaggtatctcagtaagctcaaacag
tatctgtggccaccagtcccaaaccttgacaaagtactccacggcttcctgacagatatc
aacggacagacttgggaccctcccttcaacatcaagcagtgttcagaggagaccccagct
tgtgtcgtggagatcatgtctgagagggaggctccaggcagagggatgcttcctttacta
ctctccccagagcaaggcacttcaggcggggaggaggagagcctgcctaccctggtcctg
gaggtcagtccggactacgtgaccctgaccacggatgacgtcatcccccgtctcggaggg
aacgagtacgtgtacgatggggaggtgggggcggagtctcagagcctgtgggtgggggga
gaggaggtgctccaggtgaggtgtcactgctcctttcctaggtcctccagcttcccatca
tcctccagtaccacggacatcctcaaccactcctacctactgctggccgagcaccccatt
aatagactggactatccagggcagcagtgcgccccccagggcagcagggtctatgtcaac
ctggaggacacaagctcagcaaacacaaatgcctga
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