Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139406927
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Entry
139406927 CDS
T10872
Name
(RefSeq) prostaglandin E2 receptor EP3 subtype
KO
K04260
prostaglandin E receptor 3
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla04020
Calcium signaling pathway
ocla04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
139406927
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
139406927
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04030 G protein-coupled receptors [BR:
ocla04030
]
139406927
G protein-coupled receptors [BR:
ocla04030
]
Rhodopsin family
Lipid
Prostaglandin
139406927
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Motif
Pfam:
7tm_1
7TM_GPCR_Srbc
7TM_GPCR_Srx
7TM_GPCR_Srv
LiaI-LiaF-TM_PspC
Motif
Other DBs
NCBI-GeneID:
139406927
NCBI-ProteinID:
XP_071006190
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Position
4:51654016..51673689
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AA seq
364 aa
AA seq
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MLESNKSLRESNVTKSDSCGSVSVVFPITMMVTGMVGNSLALMLVYSSYRKKENNRKKSF
LLCIGSLALTDLFGQLLTSPIVISVYRADLKWDRIDSSGSLCAFFGVCMTTFGLCSLFFA
SAMAIERALAITSPHWYSNHMKTSVTKQILAVILCLVLFFSLLPVAGVGHYTLQWPGTWC
FISTGDREVPGNMFFSITFAVLGIFSLLVTFSCNVVTIRGLVIRCKTKSGTSHSSKQWER
LTTETVIQLLGIMCVLLICWVPLLVLMLRMISTQTSSHHCKPAEVSFTPSQDIQVDCNFF
LTAIRLASLNQILDPWVYLLLREIILRKFCQVANAVSNCSIDGQKETQTALDVLNKQPSD
TNGL
NT seq
1095 nt
NT seq
+upstream
nt +downstream
nt
atgttggaatccaacaagtctttgcgtgagagcaatgtcaccaaaagtgacagctgtgga
tccgtatcagttgttttccccattactatgatggtaacgggaatggtgggcaattctctc
gctcttatgctggtatatagctcgtacagaaaaaaagaaaataacaggaaaaagtcattc
ctactctgcatagggtcgctggcattgacagatctgtttggacagcttctcaccagcccg
atagttatatcagtttacagagccgatttgaaatgggaccgcatagactcatcggggagt
ctgtgtgctttctttggagtgtgtatgacaacttttggcttgtgttctctattctttgcc
agcgcaatggcaattgagagggcattggcgattacaagtcctcattggtactccaatcac
atgaagacaagtgtgacaaagcaaattctggcagttatattgtgtcttgttctttttttc
tcgctgttgccggtcgcaggagttgggcactatacgctgcaatggccaggcacttggtgc
ttcataagcactggagacagagaggtcccgggcaacatgtttttctccatcactttcgct
gttcttgggatattctcacttcttgtgactttctcctgcaacgtcgtcacaattcgtgga
ttagttattcgttgcaaaacgaaatcgggcacatctcactcatccaagcagtgggaacga
ttaaccacggagacagtcattcaactattgggaatcatgtgtgtactgcttatatgctgg
gttcctttactggtgctgatgttaagaatgatctcgacacagacatcgtcacatcactgc
aaaccggcagaagtgtctttcactcctagtcaagacatccaggtggactgtaacttcttt
ctcaccgccattcgcctggcctctctgaaccagatcctggacccttgggtttacctgctc
ctaagggagattatactgcgcaagttctgccaggtggccaatgctgtgtccaactgctcc
atagacggacaaaaggagactcagacggccctggatgttctcaacaagcagccttctgac
actaacggtctgtag
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