Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139406959
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Entry
139406959 CDS
T10872
Name
(RefSeq) NLR family CARD domain-containing protein 3-like
KO
K22614
NLR family CARD domain-containing protein 3
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Brite
Pattern recognition receptors [BR:
ocla04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
139406959
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GFIT
Other DBs
NCBI-GeneID:
139406959
NCBI-ProteinID:
XP_071006276
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Position
4:complement(55469057..55485076)
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AA seq
1073 aa
AA seq
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MSLSGEREEGGPASKRRLSGEREEGPASKRHLSGEHDTKAKSPIKQERPASPVPSCVSMK
SDWSMGQPIEFGEGDFSTEQRNQQEGSESGILSGQSSQSHQTDLASIFSLLEENIMTFVK
NELKMFKRILSPELPEGFQGQKQDKDVVDAREGALKIALHVLRKMNQKELADILEKNSDD
PAVICQRELKSNLKKKFQCVFEGIAKQGNPTLLNKIYTELYITEGGTGEVNNEHELRQIE
TTTRKQARPETAIKCNDIFKPLTEQDKLIRTVLTKGVAGIGKTVSVQKFILDWAEGKANQ
DVQFVFSFPFRELNLIKEDKHTFIELLNHFSMETKQSRISNYDTYKVLFIFDGLDECRLP
LDFQKNKICWDVTKSTSVDVLMTNLIKGNLLPSALIWITTRHAAANKIPSGCVDQVTEVR
GFNDPQKEEYFRKRFSDEDLASRIISHIKTSRSLHIMCHIPVFCWIAATVLEHMLSTDKR
EEMPTTLTEMYTHLVVFHTKQKNEKYIGKEETGPHWHKESILSLGKLAFQQLVNGNLIFY
EEDLKEAGIDVFEASVYSGLCTQLFKEECGLYQNKVYCFVHLSIQEFLAAVYVFLSFINN
NENLMDKLQTKYKSEVTFYKSAVDKALQSETGNLDLFLRFLLGLSMESNQKHLRGLLTKT
RSSSQSHEETVKYIKKKIRENPSPERCINLFHCLNELNDHSLVEEIQSYLRSGSLSRDNL
SHAQWSALVFVLLTSEKDLDVFDLKKYSRSEEGLLRLLPVVKASTAVLLSGCGVTEEGCA
SLVSALRSNPSHLRELDLSNNDLKDSGVKLLSAVLGNPHCKLETLRLSRCLVTEEGCASL
VSALRSNPSHLRELDLSYNHPGDSGVRLLSAGLEDPHCRLEKLNVEHGGEYTMKPGLRKY
VCDLTLDLNTVNRLLSLSEENRKVTCRTEKQPYPDQPERFEDREQVLCREGLTGRCYWEV
EWSGRRAGIGVTYKGISRRGRVKDCGLGWNDKSWSLFCSDNSYIAWHNNSDTTINVRPSS
SHRVGVYLDWSAGTLSFYRASSDTLTHLITFTSTFTEPLYPGFWVYEDSSVSL
NT seq
3222 nt
NT seq
+upstream
nt +downstream
nt
atgagtctctctggggagagagaggaggggggccctgcctctaaaaggcgtctctctggg
gagagagaggagggacctgcctctaaaaggcatctctctggggaacatgacaccaaagct
aagagcccaatcaagcaggagagaccagcctcacctgttcccagctgtgtgtccatgaag
agtgactggtctatggggcaacctatagagtttggagagggagacttttctactgaacaa
agaaaccaacaggagggatcagagtcagggattctcagtggtcagtcttcccagagtcat
caaacagatctggcctccatattcagtttgcttgaagagaacattatgacatttgtgaag
aacgagctgaagatgttcaagaggattcttagtccagaactcccagaaggttttcagggt
cagaagcaggataaggacgtggtggatgccagagagggggctctgaagatcgcactgcac
gtcctgaggaaaatgaaccagaaggagcttgctgacatactggagaaaaattcagatgat
cctgctgtgatttgccaacgtgaactcaaatctaatctaaagaagaagtttcaatgtgta
tttgaggggatcgctaaacaaggaaacccaacacttctcaataagatctacacagagctc
tacatcacagagggtggaactggagaggtcaataatgaacatgagctgagacagattgag
acaacaaccaggaaacaagcaagaccagaaactgcaatcaaatgtaacgacatcttcaaa
cccttaactgaacaagacaaacttatcagaactgtgctgactaagggagttgctggcatt
ggaaaaacagtctctgtgcagaagttcattctggactgggctgaaggaaaagcaaatcag
gatgtccaatttgtattttcattcccttttcgggagctgaatttgattaaagaggacaaa
cacactttcattgaacttctcaatcacttctcgatggaaaccaaacaatcaagaatctcc
aactacgacacgtacaaagttctattcatctttgatggtctggatgagtgccgactgccc
ctagacttccaaaagaacaagatctgttgggacgtcacaaagtcaacctcagtggatgtt
ctgatgacaaatctcatcaagggaaatctgcttccctctgctctcatctggataactacc
cgacatgcagcagccaataagatcccttcagggtgtgttgaccaggtgacagaggtacga
gggttcaacgacccacagaaggaggagtacttcaggaagagattcagtgatgaggacctg
gccagcagaatcatctcacacataaagacatcaaggagcctccacatcatgtgtcacatt
ccagttttctgttggattgctgcaacagtccttgaacacatgttgagtacagacaagaga
gaagagatgccaacgactcttactgagatgtacacacaccttgtggtgtttcataccaaa
caaaagaatgaaaagtatattgggaaagaagagacaggtccacactggcataaggagagc
attctgtccctgggaaagctagcttttcaacagcttgtgaatggcaatctgattttctat
gaagaagacctgaaagaggctggtattgatgtttttgaagcctcggtgtactcaggattg
tgcacacagctctttaaagaggaatgtgggctgtaccagaacaaggtgtactgctttgtt
catctgagcattcaggagtttctggctgctgtatatgtgttcctctcattcattaacaac
aatgagaatctaatggacaaactgcaaacaaaatacaagtctgaagttactttctacaag
agtgctgtggataaagccttacaaagtgagacaggaaacctggatctgttcctccgcttc
cttctgggcctctcaatggagtccaatcagaagcacttacgaggtctattgacaaagaca
agaagcagctcacagagccatgaagaaacagtcaagtacatcaagaagaagatcagggag
aatccctctccagagaggtgcatcaatctgttccactgtctgaatgaactgaatgaccat
tctctagtggaggagatccaaagctacctgagatcaggaagtctctctagagacaacttg
tcacatgcacagtggtcagctctggtctttgtgttgctgacttcagaaaaggacctggat
gtgtttgacctgaagaaatactccagatcagaggaaggtcttctgaggctgctgccagtg
gtcaaagcctccacagctgttctgctgtcaggctgtggagtcacagaggaaggctgtgct
tctctggtctcagctctgaggtcaaacccctcacatctgagagagctggatctgagtaac
aatgacctgaaggattcaggagtgaagctgctctctgctgtactggggaatccccactgt
aaactggagactctgaggctgtcacgctgtctagtcacagaggaaggctgtgcttctctg
gtctcagctttgaggtcaaacccctcacacctgagagagctggacctgagctacaatcat
ccaggagactcaggagtcagactgctctctgctggactggaggatccacactgcagactg
gagaaactcaatgtggaacatggtggagagtacacaatgaaacctgggcttagaaaatat
gtctgtgatctcacactggacctaaacacagtaaacagacttctctctctgtctgaggag
aacagaaaggtgacatgtaggacagagaagcagccatatcctgatcaaccggagagattt
gaggacagagaacaggtgctgtgtagagagggtctgactgggcgctgttactgggaggta
gagtggagtgggagaagggctggtataggagtgacatataaaggaatcagcaggagagga
agggttaaggactgtgggcttggatggaatgacaagtcctggagtctgttctgctctgac
aacagttacattgcctggcacaataatagtgacactaccataaacgtccgcccctccagc
tcccacagagtaggagtgtatctggactggtcagccggcactctgtccttctatagagcc
tcctctgacacactgacccaccttatcacattcacctccacattcactgagcccctctat
ccagggttttgggtttatgaagactcctcagtgtccctgtaa
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