Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139406987
Help
Entry
139406987 CDS
T10872
Name
(RefSeq) proteasome subunit alpha type-6
KO
K02730
20S proteasome subunit alpha 1 [EC:
3.4.25.1
]
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla03050
Proteasome
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03050 Proteasome
139406987
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
ocla01002
]
139406987
09182 Protein families: genetic information processing
03051 Proteasome [BR:
ocla03051
]
139406987
Enzymes [BR:
ocla01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.25 Threonine endopeptidases
3.4.25.1 proteasome endopeptidase complex
139406987
Peptidases and inhibitors [BR:
ocla01002
]
Threonine peptidases
Family T1: proteasome family
139406987
Proteasome [BR:
ocla03051
]
Eukaryotic proteasome
Core particles (20S proteasome)
alpha type subunits
139406987
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Proteasome
Proteasome_A_N
AMIN-like
Ribophorin_II
Motif
Other DBs
NCBI-GeneID:
139406987
NCBI-ProteinID:
XP_071006307
LinkDB
All DBs
Position
4:complement(57330374..57333532)
Genome browser
AA seq
246 aa
AA seq
DB search
MSRGSSAGFDRHITIFSPEGRLYQVEYAFKAINQGGLTSVAVRGKDCAVVVTQKKVPDKL
LDASTVTHLFRITENIGCVMSGMTADSKSQVQRARYEAANWKYKYGYEIPVDMLCKRIAD
ISQVYTQNAEMRPLGCCMIVIGVDEECGPQVYKCDPAGYYCGFKATAAGVKQTEATSFLE
KKVKKKLDWTFKETVETAITCLSTVLSIDFKPSELEIGVITTEDPKFRILTESEVDIHLV
SLAERD
NT seq
741 nt
NT seq
+upstream
nt +downstream
nt
atgtcccggggctcaagtgcaggttttgatcgtcacatcactatcttctctccagagggt
agactctaccaagttgaatatgctttcaaggccataaaccaaggtggtctcacatcagta
gcagtcagaggtaaagactgcgcagtagtcgtcacacagaagaaagtaccggacaagctg
ttggatgcctccacagtcactcacctgttcaggataacggagaacattggctgtgtgatg
tcaggaatgacagcggacagcaagtcccaggttcagagagcgcgctacgaggcagccaac
tggaagtacaagtatggttatgagatcccagtggacatgctgtgtaagaggattgctgac
atctctcaggtgtacacacagaatgctgagatgaggccgctgggatgctgcatgatagtg
ataggtgtggatgaggagtgtggtccccaggtgtacaagtgtgaccctgcaggctactac
tgtgggttcaaggccactgctgcaggggtcaaacagacagaggccaccagcttcctggag
aagaaagtcaaaaagaaactcgactggacctttaaagaaactgttgagaccgccatcacc
tgtctgtcaacggttctgtcaattgatttcaagccctctgagctggagataggagtcatc
acaacagaggatcctaagttcaggattctgaccgagtctgaggtggacatccacctggtg
tccctagcggagagagactga
DBGET
integrated database retrieval system
