Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139406989
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Entry
139406989 CDS
T10872
Name
(RefSeq) arf-GAP with SH3 domain, ANK repeat and PH domain-containing protein 2-like isoform X1
KO
K12488
Arf-GAP with SH3 domain, ANK repeat and PH domain-containing protein
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
139406989
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ocla04131
]
139406989
Membrane trafficking [BR:
ocla04131
]
Endosome - Golgi transport
Arf GTPases and associated proteins
Arf GTPase associated proteins
139406989
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ArfGap
BAR_3
PH
Ank
Ank_2
SH3_9
BAR
SH3_1
Ank_5
SH3_2
Ank_4
Ank_3
PH_13
PH_9
Motif
Other DBs
NCBI-GeneID:
139406989
NCBI-ProteinID:
XP_071006315
LinkDB
All DBs
Position
4:58246257..58295236
Genome browser
AA seq
1041 aa
AA seq
DB search
MPPPELITVTEFVAETNEDYKAPTTSNFTTRMSHCRNAVAALEEALDVDRGVLSKIKKSV
KAINTSGLAHFDNEEQYIQSMEKFGDNCVCREDPVVGSAFLKFAVFTKELTALFKNLLQN
MNNIITFPIDSLLKGDLKGVKGDLKKPFDKAWKDYETKLTKIEKEKKEHAKQHGMIRTEF
SGGEIAEEMEKERRLFQFQMCEYLLKVNEIDTKKRVDFLQNLIKYFHAQCNFFQDGLIAV
NSLKPSIEKLATDLITIKQTQDGERKQLSQLRDVLKSSLLSEQKEDSQAKQTGYSLHQLQ
GNKAYGTECCGILHKRSEGLRKVWQKRKCSVKNGFLTISHGTANRPPAKLNLLTCQVKLN
PDEKKSFDLFSHDRTYHFQAEEETECQIWISVLQNSKEEALNNAFKGDQDEGGENNIVQE
LTKAIVSEVKRMSGNDVCCDCGAPKPTWLSTNLGVLICIECSGIHREMGVHYSRIQSLTL
DVLGTAELLLAKNVGNAGFNEIMEADLSARGVTKPNPSSDMQTRKDYITAKYTEKKFVQR
KCADEESRLHVLCEAVKTRNILSLIQVYAEGVDLMETIPLANEHEPGETALHLAVRMVDR
NSLHIVDFLTQNSGNLEKQTAKGSTALHYCCLTDNSECLKLLLRGRASVSIANEAGETPM
DIAKRLRHPQCEELLTQAMTGKFNVHVHVEYEWRLQNEDDDLDESEDEMEDKPIPQRRPE
QERPVSCFVPGNGPMGPMPGGLNMASLARDAASLVRDKQRAHVPSMMMNNETYGAILDLS
PPPRGMPGGPGLHIPPLPPRNTSKGPGWKQAHMEVVGRQRSSSDPPNPHIPERNSSMNVF
PPAVPPAAPPPLVSKRTSVMESRSHKTAPLPPLPSVLPGPPVSPIIPLPPFPPTVPPAPS
FRLTQPPPVPAHHPRSRVARSKSTKSPTISDKPMPKGPPGRLAGQTNRSVKNAPVTGSPP
SFGPTPPPTPKPRANLPKQRSRRVKARYSCLADNPDELTFTEGEVIVVDGEEDQEWWVGH
IEGDLTRKGVFPVTFVHLITD
NT seq
3126 nt
NT seq
+upstream
nt +downstream
nt
atgccgccgccggagttgatcacggtcacggaatttgtggccgaaactaatgaggactac
aaagcgcccacaacctccaacttcaccactcggatgtcgcattgtcggaacgccgtggca
gcattggaagaggctctagacgtagaccgaggagtactttccaagatcaagaagtctgtc
aaggccataaacacctctggcctggcccactttgacaatgaggagcagtacatccagtct
atggagaagtttggggacaactgtgtctgtagagaggaccctgtggtgggctcagccttc
ctcaagtttgccgtctttaccaaagagctcacagccctcttcaagaacctgttgcagaac
atgaacaacatcatcaccttccccatagacagtctactgaaaggagacctgaaaggggtc
aaaggggatctgaaaaagccttttgataaagcctggaaagattacgaaacgaaactcact
aagatagagaaggagaagaaggagcatgccaagcagcatgggatgatacggacagagttc
agtggcggagagatcgctgaggagatggagaaggagagacgccttttccagttccagatg
tgcgagtatcttctaaaagtgaatgaaatcgatacgaaaaagagggtcgacttcctccaa
aacctcatcaaatatttccacgcccagtgcaacttcttccaggatgggctaatcgcagtg
aatagcctcaaaccttccatagagaaactggcgacagacttgattacaatcaaacagacc
caagatggagagaggaaacagctgagtcagctcagagatgttctcaagtcctccctactg
tctgaacagaaagaggactcccaggccaaacagactggatacagccttcatcagctccag
gggaataaggcctacggtacggaatgctgtggaattctccataagaggagcgagggcctg
aggaaagtgtggcagaagaggaagtgttctgtgaagaacgggttcctgaccatctcccat
ggaacagcgaacagaccaccagctaaactcaacctgctaacctgtcaagtgaagctcaac
ccagatgagaagaaaagctttgatctcttctcccatgacagaacctatcactttcaagct
gaggaagagactgagtgtcagatatggatctcagtcctgcagaacagtaaggaggaggcg
ctgaacaatgccttcaaaggagaccaggacgagggaggggagaacaacatagtgcaggag
ctgaccaaggccatcgtcagtgaggtcaagaggatgagcggcaacgacgtctgctgcgac
tgtggagcgcctaagcccacctggctctccactaacctgggagtgctcatctgcatcgag
tgttctggaatccacagggagatgggcgtccactattctagaatacagtctctcacactg
gacgtcctgggaaccgcagagctcctgctggcaaaaaatgtgggcaatgcgggtttcaat
gagatcatggaagcggacctgtctgcacggggcgtgactaaacccaacccctccagtgac
atgcagacgcggaaggactacatcacagccaagtacacagagaagaagtttgttcagagg
aagtgtgcggacgaggagtccaggctccacgtcctgtgtgaggcagtgaagacccgaaac
atcctctccctcatccaggtttacgctgaaggagtggacctgatggagaccataccactg
gccaatgagcatgaaccgggtgagacggcactacatctagcagtacgaatggtggaccgc
aactccctccatattgtggacttcctgacccagaacagtggcaacctggagaagcagaca
gccaaagggagcacggcactgcactactgctgccttacagacaacagtgagtgtctgaaa
ctgctgctgcggggccgggcctcggtcagtattgccaacgaggcaggagaaacaccaatg
gacatcgccaagcgcctcagacatccacagtgtgaagagctgctgacccaggctatgacg
gggaagtttaacgtccatgtgcatgtggaatatgagtggcggctccagaacgaagacgac
gacctggacgagagcgaagacgagatggaggacaagcccatcccccaaagacggccagag
caggagcgtccggtcagctgttttgtcccaggaaatggtcccatgggtcccatgcctgga
ggtctcaacatggcctccctggcccgcgacgcagccagcctggtcagggacaagcagaga
gcccatgtccccagcatgatgatgaacaatgagacctatggcgccatcctggacctcagc
ccccctccccgcggcatgccagggggaccggggttacacatcccacccctgccccccagg
aacaccagcaaaggcccagggtggaagcaggctcatatggaggtggtgggtagacagagg
tcctcctcagaccccccgaaccctcacatcccggagcgtaacagctccatgaatgtgttt
cccccagctgttccacctgctgctccgcctcccctggtgagtaaaaggaccagtgtgatg
gagtctagaagccataagactgctcctctaccaccactaccttcagtattacctgggcct
ccagtgtcccccatcatcccactaccaccattcccgccaacagtgccccctgcaccctcc
ttccgactcacacagccccctcctgtaccagcccaccatcccagaagcagagtcgcacgg
tccaaatcaactaaatcacccactatttcagataaacccatgcctaaaggaccacccggc
aggcttgctggacaaactaatagatccgtaaagaatgcacctgtaactggatcccctccg
agctttggtccaactcctccaccaacacccaagccccgcgctaacctccctaaacagagg
tccaggagggtgaaagcccgctacagctgtttagctgataacccagatgagctaacgttc
acagagggagaggtgattgtagtggatggagaggaggaccaggagtggtgggtgggacat
attgagggggatttgactaggaaaggagtcttccctgtgacatttgtgcacttaatcact
gactga
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integrated database retrieval system
