Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139407058
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Entry
139407058 CDS
T10872
Name
(RefSeq) protein MTSS 2-like isoform X1
KO
K20128
metastasis suppressor protein 1
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
139407058
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ocla04131
]
139407058
Membrane trafficking [BR:
ocla04131
]
Endocytosis
Bin/Amphiphysin/Rvs (BAR) family proteins
I-BAR proteins
139407058
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IMD
WH2
Motif
Other DBs
NCBI-GeneID:
139407058
NCBI-ProteinID:
XP_071006480
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Position
1:40513048..40558072
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AA seq
807 aa
AA seq
DB search
MESVEKECGALGGLFQAIVNDMKSSYPVWEDFSAKATKLHSQLRTTVLATVAFLDAFQKV
ADMATNSRGGTRDIGSALTRMCMRHRSIETKLRHFTNALMEGLVTPLQDRIEEWKKTANL
LDKDHAKEYKRSRQEIKRKSSDTMKLQKKARKGRGNLRPQLDSAMQDVSDLYLLMGETEK
QAVRRALLEERGRYCFFINLLKPVVNGEIAMLGEITHLQAIVDDLTVLTEDPHKLPPASE
QVIGDLKGSDYSWSYQTPPSSPSSAASRKSSMCSILQMPTVGAHRLSSVSSHDSGFISQD
ANTHSKPPSPMPSDITSQKSTSSASSEASETCQSVSECNSPTAFGSGSSFGTFRPALSHT
GSIRPLSVILPGSPTFNRSPGSKTPSPISKVPSWKDWSKTSTYEPSLATTLQQRRESLDR
MREQEVPSSPKGFSGMHPDTHRSRMAQATIAAKHGGEAMSPAASTLAMVLTRGLSIEQQK
NSRESLQYSSGYSTQTNTPCCSEDTIPSQGSDYECYSLNGDADTSREADFDKSSTIPRHS
NIAQNYRRMIQTKRPASTAGLPAGVSPPGGMHGVIYGGDGRHGAITSGTATIRRTPSSKT
GVRRTPSTSGPIAIRPPIVPVKTPTVPDSPVYSPCYSPSYSPSLIQSMGSEEYLYGDETP
SSALEYMKASPKRLSLPDTTAWSSGGGLDQSVYAQQPPGMTGLSLEEDPQLAANRHSLVE
KIGELAASAHALGEGQFPFSSLDPLPADPMGTNSVTQHPQQPPHRPQEGVDMLVSIRRGV
RLRKAVSNDRSAPRILQDTAAASRILR
NT seq
2424 nt
NT seq
+upstream
nt +downstream
nt
atggagtcggtagaaaaggagtgcggagcgttgggtggattattccaagctatcgtcaac
gacatgaagagttcatatccagtgtgggaagacttcagtgccaaggctactaaactgcac
tcccaactcaggaccacagttctggcaacagtggcatttctagatgcctttcagaaggtg
gcagacatggcgaccaactcaagaggaggcaccagggacataggttcagctctgaccagg
atgtgcatgagacaccgcagcatcgagactaaactacgccacttcaccaatgctcttatg
gaaggcctagtcactcctctccaggacaggatagaggaatggaagaagacagctaacctg
ctggacaaagaccacgccaaagaatacaagcgttctcgccaggagatcaagaggaagtcc
tcagacaccatgaagctccagaagaaggccaggaaaggccggggtaacctgcgtccccag
ctggacagtgccatgcaggacgtcagtgacctctaccttctgatgggggagaccgagaag
caggcggtgcgccgggccctcctagaggagagggggcgctactgcttcttcatcaatctg
ctgaagcctgtggtgaatggagagatagccatgctgggagagatcactcacctgcaggcc
attgttgatgacctcactgtgctcactgaagacccacacaaactgcccccggctagtgag
caggtgatcggggacctgaagggttcagactacagttggtcctaccagacccctccctcc
tctcccagcagtgctgcctccaggaagagcagtatgtgcagtatcctccagatgccaact
gtcggtgcccatcgtctcagtagtgtctcgtcccatgattcagggttcatctctcaggat
gccaacacccactccaagcccccctcgcccatgccctctgacatcaccagccagaagtcc
accagctcagcctcctctgaggcatcagaaacctgccaatctgtcagtgaatgcaactct
cccaccgcgtttggctcgggctcatccttcggtaccttccgccccgctctctcacacact
ggctccatcaggcctctctctgtcatacttcctgggtcccccacatttaaccgctctcct
ggatccaaaaccccctcacccatctcaaaggttcctagctggaaggattggtctaaaacc
agtacctatgagccctcattggctaccactctgcagcaaaggagagagtcattggacagg
atgagggagcaggaggttccttccagtcctaaagggttctctgggatgcacccagacact
cataggtccaggatggcccaagctactatagcagccaagcacggcggtgaggccatgtcc
ccagcagctagtacactagccatggtgctgacgcgtggtctcagtatagagcagcagaag
aatagcagggaatctctgcagtactccagtggctatagcacccagaccaacacaccctgc
tgctcagaggacaccatcccctcacaggggtctgactatgagtgctactctctgaacggg
gacgctgataccagcagggaggctgacttcgacaagtcctccaccatcccccgccacagc
aacatcgcccagaactaccgccgcatgatccagaccaagaggccggccagcaccgccggg
ttacccgccggagtgagccctcctggtggtatgcatggagtgatttatgggggtgatggg
aggcacggagccatcacctctggaacagccaccatccgccggaccccctcctccaaaacg
ggggtgagacgcacaccgtccacctcaggccccatcgccatccgcccccccatcgttcca
gtcaagacccccacggtgccagactctcctgtctactccccctgttactcccccagctac
tctcccagccttatccagagcatgggcagcgaagagtacctgtatggggacgagactcca
tccagcgccttggagtacatgaaagcctcccccaagcggctgagcctacctgacaccacc
gcctggagctccggaggggggctggaccaaagtgtctatgcccagcagccccctggcatg
acaggcctcagcctagaggaggacccccagctggcagccaaccgccacagcctggtggag
aagatcggagagctcgcggccagcgcccacgccctgggcgagggtcagttccccttctcc
tctctggaccctctgccagcggacccaatgggtaccaactctgtaacccaacacccacaa
caaccaccacacaggccccaggagggcgtggacatgctggtgtccatacggagaggtgtg
aggctccgcaaggcggtctccaacgacagatcagcccccaggatactgcaggatactgca
gcagcatccaggatactgcggtag
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