Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139407086
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Entry
139407086 CDS
T10872
Name
(RefSeq) mediator of RNA polymerase II transcription subunit 23 isoform X1
KO
K15166
mediator of RNA polymerase II transcription subunit 23
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Brite
Transcription machinery [BR:
ocla03021
]
Eukaryotic type
RNA polymerase II system
Mediator complex
Other mediators
139407086
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Ortholog
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GFIT
Other DBs
NCBI-GeneID:
139407086
NCBI-ProteinID:
XP_071006556
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Position
4:complement(63504257..63534732)
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AA seq
1477 aa
AA seq
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MSSTRKKTKSARAGHSKPAPSPDSPPDAANAGPTETLTVEMLQSVIGTLKTDIFGKIDSL
STNLRSEISMVKDELKKSIESITLQNKLDAHGVALSDLERDAADHSTRISELEANVGSLT
TKVAYLDNRCKNMESRMRRNNIRLLGIPEGVEGPRPTEFMAQLLQELLGLEENSLLDRAH
RTLRSRPRDGEPPRPLVIRVPFFHVRNDTLRRSGEASLVVPHGVEQMGVRDLLKALLDKI
QTIPNTVSSAVVQQLLAAREVVEYILDRNACLLPAYFAITEIRKLYPEGMLSHWLLGSLM
SDFVDSFRPTARINSICGRCSLLPVVNNSGAICNSWKLDPTTLRFPLRGMLPFDKDLFEP
QTGLLRYVLEQPYSRDMVCNMLGLNKQTLNIAQHKQRCPVLEDQLVDLVVYAMERSETEE
QFDDGGTSQLLWQHLSSQLIFFVLFQFASFPHMVLSLHQKLAGRGLIKGRDHLMWVLLQF
ISGSIQKNALADFLPVMKLFDLLYPEKECIPVPDISKPQSTHAFAMTCIWIHLNRKAQND
NSKLQIPIPHSLKLHHEFLQQSLRNKSLGMTDYKIALLCNAYSTNSECFTLPMGVLVETI
YGNGSMRITLPGTNCTASGSVTPLPMNLLDSLTVHAKMSLIHSIATRVIKLAHAKSSIAL
APALVETYSRLLVYMEIESLGIKGFISQLLPNVFKSHAWGILHTLLEMFSYRMHHIQPHY
RVQLLSHLHSLAAVPQTNQNQLHLCVESTALRLITALGSSEVQPQFTRFLSDPKTVLSAE
SEELNRALILTLARATHVTDFFTGSDSIQGTWCKDILQTIMNFTPHNWASHTLSCFPAPL
QAFFKQNNVPQESRFNLKKNVEEEYRKWKSMTNENDIITHFSMQGSPPLFLCLLWKMLLE
TDKINQIGFRYTTKVLERIGARALVAHVRTFADFLVYEFSTSAGGQQLNKCIEILNDMVW
KYNIVTLDRLILCLAMRSHEGNEAQVCYFIIQLLLLKPNDFRNRVSDFVKENAPEHWLQS
DWHTKHMTYHKKYPEKLYFEGLAEQVNPPMQQQSHYLPIYFGNVCLRFLPVFDIVIHRFL
ELLPVSKSLETLLDHLGGLYKFHDRPVTYLYNTLHYYERHLRDRTNLKRKLVHAIMSSLK
DNRAPGWCLSETYIKCGMNPREDNVWIPDDTYYCKLIGRLVDTMAGKSPGPFPNCDWRFN
EFPNPAAHALHVTCVELMALAVPGKDVGNALLSVVLKSQPLVPRENITAWMNAIGLVITA
LPEPYWVVLQDRIVSVLGSPCFTTETEWVGYPFALLDFTACHQSYSEMYCSYVLALAHAV
WHHSSIGQLSLIPKFLSEVLKPIVKTEFQLLYVYHLVGPFLQRFQQERTRCMLEIGVAFY
EMLQAVDQHSQHLSYMDPICDFLYHIKYMFTGDSVKDQVEKIILTLRPAMKLRLRFITHT
SKMEPAAASVPQPSSSVSSPAPQSNPGPSNLPLSGAQ
NT seq
4434 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtcgacccggaaaaaaacgaagtctgcaagagcaggccacagcaagcccgcgccc
tctcctgattcgccaccggacgctgctaatgccggccccacggaaacactgactgtggag
atgctacaatctgtgataggcaccctcaaaaccgatattttcggcaaaattgactctctc
tctaccaatctcaggtcagagatatcaatggtcaaagacgagcttaaaaaatctattgag
agtataacgttacagaataagctcgacgcacacggagtggccttatcggatttggaacga
gatgctgcagaccacagcactcgcattagcgagctagaggctaacgttggctcactgaca
actaaggtggcatacctcgacaatagatgcaaaaatatggaaagtagaatgcggaggaac
aacattcgtctactgggaataccggagggagtggagggcccaagacccacggagttcatg
gcccagctgcttcaggagctgctcggtctggaggagaactcactgctagaccgggcccac
cgcactctgcgtagccgaccacgggatggagaacccccgcgaccattagtcatcagggtg
cctttctttcacgttcgcaatgacacactgaggagatcgggagaagcatcccttgttgta
ccgcatggtgtggaacaaatgggagttagagatctactgaaggctctgctggataagatt
cagaccatccccaacactgttagctcagctgtggtccagcagctgctagctgcacgagag
gtggtggagtacatcctcgacaggaacgcgtgcctcctgcctgcctactttgccattaca
gagatcagaaaactctatcccgaggggatgttgtcacactggcttctgggcagtctcatg
tcagattttgttgacagttttcgacccactgcaagaattaactccatctgtgggagatgc
agcctccttccagtggtcaacaactctggagctatctgcaactcctggaagctggacccc
accacattacgattccctctcaggggcatgctgcccttcgacaaggacctgtttgaacca
cagacagggctgctgcgatatgtgctggagcagccctactctcgagacatggtctgcaac
atgttagggctcaacaagcagaccttgaacattgctcagcacaagcagcgctgcccggtg
ctcgaggaccagctggtggacctggtggtgtacgccatggagcgctcagagaccgaggag
caatttgacgacggcggcaccagccagctcctgtggcagcacctctccagccagctcatt
ttctttgtgctcttccagttcgccagcttcccacacatggtgctctcgcttcaccagaag
ctggccggtcgaggtctgatcaaaggccgagaccacctcatgtgggtcctcctccagttc
atatctggcagcattcagaagaacgccctggctgactttctccctgtcatgaagctgttc
gatcttctctacccagagaaagagtgcatcccggtgccagacatcagcaagccccagtcg
acacacgccttcgccatgacttgcatctggatccacttgaaccgcaaggctcagaacgac
aactccaagctgcagattcctatcccccactccctcaagctgcaccatgagtttctccag
cagagcctgaggaacaagtccctggggatgacggactataagatcgccttgctgtgtaat
gcctactccactaactcggagtgcttcactctgcccatgggcgtgcttgtggagactatc
tatggcaacggcagcatgcgcatcaccctgcctggcaccaactgtaccgcatcaggctcc
gtcacaccactacccatgaacctcctagactccctcaccgtccacgccaagatgagcctg
atccatagcatcgccactcgggtgatcaagttggcccacgccaagtccagcatcgccctg
gccccagccctggtggagacctacagcagactgctggtctacatggagatagaatctctg
ggcatcaaaggattcatcagccagctcctgcccaacgtgttcaagtcccacgcctggggc
atccttcacactctgctggagatgttcagctaccgtatgcaccacatccagccccactac
cgcgtccagctgctcagccacctgcactcgctagccgccgtgccccagaccaaccagaac
cagctacacctctgtgttgagagcacagcgttaaggttgattacagcgttggggagttcc
gaggttcagcctcagttcacccgcttcctcagtgaccccaaaacggtgctgtcagctgaa
tctgaggagctcaaccgtgccctcatcctgactctggccagagccacccacgtcacagat
ttcttcacgggctccgactccatccagggtacgtggtgtaaggacatcctgcagaccatc
atgaactttactcctcacaactgggcctctcacaccctgagctgtttccctgctcctctt
caggcgttcttcaagcagaacaacgttccccaggagagccgcttcaacctgaagaagaac
gtggaggaggaatacaggaagtggaagagcatgaccaacgagaacgacatcatcacccac
ttctccatgcagggatcgccgcccctcttcctgtgtctgctgtggaagatgctgctggag
actgacaaaatcaaccagatcggcttcaggtacaccacaaaggttctggagaggatcggg
gcgcgggcgctggtggcccatgtcaggacgtttgcagacttcctggtctatgagttctcc
acgtcggccggtggccagcagctcaacaagtgtatcgagatcctcaacgacatggtgtgg
aagtacaacattgtcacgctggacagactcatcctgtgcctggccatgaggagtcacgag
ggtaacgaggcccaggtctgctacttcatcattcagctcctcctcctcaagcccaacgac
ttccgcaaccgcgtctctgactttgtgaaggagaacgcccccgagcactggctgcagagc
gactggcacaccaagcacatgacctaccacaagaaatacccggagaagctgtactttgag
ggattggcggagcaggtgaacccgcccatgcagcagcagtcccactacctgcccatctac
tttggtaacgtctgcctgcgcttcctgcccgtctttgacatcgtcatccaccgcttcctg
gagctgctgcccgtctccaagtcactggagaccttactggaccacctgggaggactctac
aagttccatgaccgcccggtgacctacctgtacaacacgctccactactacgagcgtcac
ctgcgcgaccgcaccaatctgaagaggaagctggtgcacgccatcatgagctctctgaag
gacaaccgggcgccaggctggtgcctgagtgagacctacatcaagtgtggcatgaacccc
cgcgaagacaacgtctggatccccgatgacacctactactgcaagctcatcggacgcctc
gtcgacacgatggctggcaagtcccccgggccgttcccaaactgtgactggaggttcaac
gagttccccaacccggccgcccacgctctccacgtcacctgcgtggagctgatggccctg
gcagtgcccggcaaggacgtgggcaacgccctgctcagtgtcgtcctcaagagccaaccg
ctggtgcctcgggagaacatcaccgcctggatgaacgccatcggcctggtgatcaccgcc
ttgcctgagccttactgggtggtcctgcaggaccgtatcgtgagtgtgctgggcagtccg
tgcttcaccacagagactgagtgggtgggttaccccttcgcgctgctggacttcaccgcc
tgccaccagtcctactctgagatgtactgcagctacgtgttggccctggcccacgccgtg
tggcaccactccagcatcggacagctctccctcatccccaagttcctgtctgaggtgctg
aagcccatagtaaagacagagttccagctcctctatgtgtaccacctagtggggcccttc
ctccagcgcttccaacaggagaggacccgctgcatgctggagattggagtggcgttctat
gagatgctacaggctgtggaccagcacagtcaacacctgtcctacatggatcctatctgt
gacttcctctaccacatcaagtacatgttcaccggggacagcgtcaaagaccaggtggag
aaaatcatcctgaccctgcgtccggccatgaagctccgtctgcgtttcatcacccacact
agcaagatggagcctgcagccgccagcgttccccagccctcctcctctgtgtcctcaccc
gccccacagagcaaccctggcccctccaacctccccctgtctggggcccagtaa
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