Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139407097
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Entry
139407097 CDS
T10872
Name
(RefSeq) protein broad-minded
KO
K28444
TBC1 domain family member 32
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
ocla03037
]
139407097
Cilium and associated proteins [BR:
ocla03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
139407097
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BROMI
BROMI_C
BROMI_N
RabGap-TBC_2
RabGAP-TBC
RD3
Motif
Other DBs
NCBI-GeneID:
139407097
NCBI-ProteinID:
XP_071006594
LinkDB
All DBs
Position
4:64264298..64304638
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AA seq
1304 aa
AA seq
DB search
MSQFSAEAEAELQSLLRQLLKSIKDRISGAPSIECAEEILLHLEETDKNFHNYEFVKYLR
QYVESSLGAVIEEETESCARGEGYAVGSVQDTLVHAVTRKTRESGEYKQMMQTLKNTMMV
VVESLINKFEEDQLRKEEMHRESQHQQSNSHYTDNCSDSDSSFNQSYAFIKQEQLQVLAE
KLDPSRPKEVRWEALQALCCAPPSDVLSCESWSGLRRNLSAALADPDPDLSDKVLRFFAK
TFSCSPLNVTREIYTSLAKSLESDFLYHKLSLPTGSAGIDVNRQDITRLLKQMRLMNDFQ
KEVTTFWIRHPEKYMEEIIESTFSLLSINPEHGLEPQGSEKTLKPMHLIALLDIKATWFK
KWMHGYYSRTVVFRLLERKYKSLIVAALQQCIHYYDSCDPVRDETAEVIHSMEHQHIGTA
QRTLYTTKELEYMYFVHSLCVLGRLLMYTNGRKLFPVTVWKRKDPVSLTDLLVILISIMY
QHPKPPHSDSSHADTLSPTTLVMELLRTLGDRTECAVECLYQTPVIETLLAPIITLLKGE
QAKLNSPETSLIHIADTLARIATTERGLSLFLYERNLVSGEGEGISAAHVIVQFTQRLLA
KELPLLRNAETSYGVSGAFIFVCRQMYNTCEGLQVLRPYGLHECIAAAWKKTSSLSERVP
TPVPGAIPGTSSQELQNVVVWEETLLDNLLNFAATPKGLLLLQQTGAINECVTYMFSRFT
KKLQVSRCEKFGYGVMVTQVAATAPGVVALHSSGFVQALVVEIWSVLECGREDVRVVHPK
STPMDPIDRSCLKSFLSLVNLLSSPHAMWELLGQQPLPNKAEYNLREMPTSITDLIDRLI
AVNSDVKIHSLFNYEQSHTFGLRLLSVMCCNLDSLLLLESQYNISDMLLQCQKDNITDPS
SGEGDFIIDGLSVERNHILVRMSVIGGPSERRLPLRVLQKGTDPYPWPMFSSYPLPKYYI
LNLPKTTRCKQDCEISAFLASTKNTERDGSWMDTCRRQYCKVMTTKSNIVSGNVLADLLE
KAVSYLSALPSECFFPPADYIASGSGIKTGSLSSVDQLGIRASLRYGRHLNLLRDNSEQD
LCLLMKHCQELLSQQRAKFTSELYTLQGAYPGHDWFASTVFLIMAGDMERALRLLLHLST
LLTSAFLWPARLHGSVHLPMEIAQSSIHPVYSCTAHYVEMLLKTEVPLVFSAFRMSGFTP
SQMCVQWLGQCFWNYLDWSEICHYVSTCVVMGPDYQVYMCVAVLKHLQQDILQHTQTQDL
QVFLKEEPIQGFRVSNYLEYMEGLERSYRTMVLTDMNNISQRVS
NT seq
3915 nt
NT seq
+upstream
nt +downstream
nt
atgtctcagttctcagctgaggctgaggctgaacttcagtctctgttgaggcaacttcta
aaaagcatcaaagacagaatctctggtgcaccatccattgaatgtgcagaggaaatcttg
cttcatctggaggagacagacaagaacttccataattatgaatttgttaagtacctgcgg
cagtatgtggaaagctctctgggagcagtcatcgaggaggagacagagagctgtgcccga
ggagagggatatgctgttgggtctgttcaggacaccttggtccatgctgttacaaggaag
actagagaatctggagaatacaagcaaatgatgcagacattgaagaacacgatgatggta
gtcgttgaatccttgattaataaatttgaagaggaccaactgagaaaggaggagatgcac
agggagagccaacatcagcagtcaaacagccattacacagacaactgttccgacagtgat
tcatccttcaatcagagttatgcatttatcaaacaagaacagctgcaagttcttgctgaa
aagcttgaccctagtaggcctaaagaggtgcgctgggaggccctgcaggctctgtgctgt
gccccgccctcggatgtgctaagctgtgagagttggagtggcctgcgcaggaacctctct
gctgccttggctgacccagaccctgacctcagtgataaggtcctgcgcttttttgcaaaa
acattctcctgttcgccactgaatgtaacaagggagatctacaccagtttagccaaaagt
ctggagtctgacttcctgtaccataaattgagcctccctactggatcagcggggattgat
gtaaacagacaggacattacccgtctcctaaaacaaatgcgattaatgaatgattttcag
aaggaagtaacaaccttttggattcggcacccagagaagtacatggaggagataatagag
agtactttctccctcctgtccataaaccctgaacacgggttagagccacaagggtcagag
aaaaccttgaagcccatgcacctcattgccttactggatatcaaagccacctggtttaag
aagtggatgcatggttactacagcaggaccgtggtctttaggctcctggagaggaagtac
aagtctctgattgtggcagctcttcagcagtgcattcattattatgactcctgtgaccca
gtcagagatgagacggctgaggtcatccactctatggagcaccagcacatcggcactgct
caaaggactctctacactaccaaggagctggaatatatgtatttcgttcactcattatgt
gtgcttggaaggcttctcatgtacactaatgggagaaagctctttcccgtcacagtgtgg
aaacgcaaagatccagtcagtctgacagacttgcttgtcattctgattagcatcatgtac
caacaccccaagcctcctcacagtgactcatcacatgcagacactctctctcccaccact
cttgtaatggagttgctgaggaccctgggtgaccgcacagagtgtgcagtggagtgcctt
taccaaacccctgtcatagagacacttctggcacccatcatcaccctgctcaaaggagaa
caggctaaattaaactccccagaaacttcattgattcatatagcagacactctcgcaaga
attgccaccactgagcgaggattatcacttttcttatatgaaagaaatctagtttctggt
gagggggaaggtatttcagctgcccatgtaatcgttcagttcacccagaggctcctggct
aaagagctgccattgttacgcaatgcagagacatcctatggcgtgagcggggcctttatc
tttgtgtgtcggcagatgtacaacacatgtgaaggactgcaggtgctcaggccctatggc
ctgcatgagtgcatcgctgcagcttggaaaaagacaagctccctgtcagaaagagttccc
accccggttcccggagccatccctggcacgtcctctcaggagctgcagaatgtagtggtt
tgggaggagactttgctggacaacctgctgaacttcgctgccacaccgaaaggcctgctg
ctcctccagcagactggagccatcaatgagtgtgtcacctacatgttctccaggtttacc
aagaaactacaggtcagccgatgtgagaagtttggctatggtgtgatggtaacacaggta
gcagcaacagcccccggtgtggtggctttacacagttctggttttgtgcaggccttagtg
gtggagatatggtcggtcctggagtgtgggagagaggatgtgagggtcgttcaccccaag
tccacccccatggaccccattgacaggagctgtctgaagtcgttcctgtccttggtcaac
ctgctgtcctccccccatgccatgtgggagctcctgggacagcagcctctgcccaacaag
gctgagtacaacctaagggagatgcccacatccattacagatttgattgataggctgatt
gctgtgaactcagatgtgaaaattcattcactgttcaactacgagcaatctcacacgttt
ggcctgagattacttagtgtgatgtgctgcaacctagactccctccttcttctggagtca
cagtacaacatttccgacatgttgctgcaatgtcagaaggacaacatcaccgatccatcg
tccggtgaaggagatttcatcattgatggtctatctgtggagaggaaccacatcctggtg
cgtatgagtgtgattggaggaccatcggagaggagacttccccttagggtcctccagaag
ggcactgacccttatccatggccgatgttttcatcataccctctgcccaagtattatata
ctgaatcttccaaagacaacccggtgtaaacaggactgtgagataagtgccttcctggcc
tccaccaagaacacggagagggatgggagctggatggatacctgtaggagacagtactgc
aaagtcatgaccaccaagtccaacattgtctcagggaacgtcctggctgatctactggag
aaggctgtgtcgtacctttctgctttgccatcagaatgtttcttcccacctgcggactac
atagcgtcggggagcggcataaagactggcagcctgtcgtctgtggaccagctggggatt
cgggcctctctcaggtatgggagacatctgaacttactgagggataactctgagcaggac
ctctgtcttttgatgaagcattgccaagagctcctatctcaacagagagccaaattcacg
tcggagctttacactctgcagggagcctaccccggtcatgactggttcgcctccaccgtg
ttcctcatcatggctggagacatggagagagcactccgcctcctcctccacctctccacc
ctgctcacatcagccttcctctggcccgccaggctccacggatcggttcacctgcccatg
gagattgctcagtctagcatccatccggtctactcatgcacagcacactatgtcgagatg
ctgctgaagactgaagtgcctctagttttctctgccttcaggatgtccggttttaccccc
tcccagatgtgtgtgcagtggctaggccagtgtttctggaactacctggactggtctgag
atctgccactacgtgtccacctgtgtggtgatggggccggactaccaggtgtacatgtgt
gtggctgtgctgaaacacctgcagcaggacatcctgcagcacacacagacccaggacctg
caggtcttcctcaaggaggaacccatccaaggcttcagagtgagtaattaccttgagtac
atggagggtctggagcgcagttacagaacaatggtactgacagacatgaacaatatctcc
cagagagtcagctag
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