Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139407154
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Entry
139407154 CDS
T10872
Name
(RefSeq) LOW QUALITY PROTEIN: inaD-like protein
KO
K06092
InaD-like protein
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
139407154
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Gene cluster
GFIT
Motif
Pfam:
PDZ
PDZ_6
PDZ_2
L27_2
Motif
Other DBs
NCBI-GeneID:
139407154
NCBI-ProteinID:
XP_071007183
LinkDB
All DBs
Position
1:complement(12564279..12858903)
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AA seq
1967 aa
AA seq
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MYENVPTVSTVERQQVLQALERLQAKMAQREEWTHSERLGVLRDALQSPLLGHILTLQHS
IKQLKDQLNCMPPDTCSDFSFSRKGQLIVSASRPASSLCTSIPGTVLSNGSALASPDQLQ
RWFCTSAKGRQTEHISLPKPLSGGLGFSVVGLRAEGTGDHGVFIRHVQPSLCAGRDGRIQ
ENDQILVINGTPLDQSVTQHQAIALLQQPGDRVDLVVARDPATITQHTHTLPPQLPPGPS
HKEQWGHMEEMELLNDGSGFGIVGGKATGVVVRTLVPNSVADKDGRLRTGDHILRIGETP
TGGLASDQVVKVLQGCGSHVRMLIARDPSGQYSSSPPPPPLPAASPVSVLPSGVEPQSRI
HRTPNLECYEIHKVPLRKKEGQSLGITIIGYNSLTREDAVGVFVKNVVPGSAAEQSGNIR
IYDRTIELDGVSLQGFTNQEVLEVMKQTGQTVLLTLVRMRLASRQDAFSVTLIVLVHPGS
HVHPDSTLTPPSTLTPPSTLTPPSTPAPPSTPAPPSTPAPPSTPAPPSTPAPTSTPAPTS
TPAPTSTPTPTSSCVEEISLSELELKDKWEQSLGPQYDVLVVELDPVIEDDAELQNYFKY
SIIFLSWLLPIHTMRLGVELDSFDGHHYISSVAPEGPVAKHGLLRPEDELLEVNAVQLYG
KSRREAVAFLREVPPPFTLVCCRHLTEENSDYQHDRDDKWRSPSTAASLSEIEAKLSSVW
ISQAYRRDPTGDQLQDRATLKEISEEDRATLKEISEEDRATIKEISEEDQATLKEISEEE
KVPTWNEEGELALWSPDIQLLELEKREKGLGFSIQDYQDPLDRAGLVIVIHSLVPGSVAE
RHGYMLPEDQLVFVNDTYLDTVSLSQAMEVLNAAPSGTVYLGIRKPLVGFSDCSILPEVL
GQEEDETELILDSGIXSPLIPALTLKPTPTSFNPTPTPTLTTIPLPPGEEREMVVDEEER
XVDVNGREGQTVDSYPRKPPPSWGEWMRVEEKGGDGTVEKLESRALFDQLSLGQSVNSWV
ETGDSEADSDSRNGRSELILTDTDTDSVHLIGTERRKRSGQGGGRHSDLPEREEGEGEET
PAFSHWGPPRRVEVWQEDGESLGISIVGGHSVIKRLKNGEELKGIFIKQVLPESPAGRTR
SLKTGDKIALVSGVDLQNASHEEAVQVIKTAPSPVVFIVQSLSATPRPVSLTGPSYRKHK
AKSRVMPKAEVGGAPPPMRLPPPYRPPGQLIEDQDEELEGVKELIRLRYGELCGELLCVE
LDRERQGLGLSLAGNKDRSCLSIFVVGISPGGPAAKDGRIRVGDELLEINNQVLYGRSHL
NASAIIKSASSKVKITLIRNEDAINQMAVPPFPHPPVVLSSTEVSPIHTPPKPAAVASPA
PTEKSQTPESLALSRGPLEASISISEVKSSVGSSGSTATELVSREATLMILRETSSKKAS
ENEAESSESVTVPAAETPLGQTANLSKTCRLSCKLPVVSSVKGELVPPPASFLPSSCTSP
DFEYCSKDPSTCPIVPGQEIIIEIAKGRSGLGLSIVGGKDTQLDAIVIHEVYEEGAAARD
GRLWAGDQILEVNGVDLRSVAHEDAITALRQTPAKVYLKVLRDEARYRDQENLDVFSVEL
QKKAGRGLGLSIVGKRKGTGVFISDVVKGGAAELDGRLMQGDQIISVNGDDMRSALQETV
AAILKCARGVVLLELSRLKAASWLSSRRPSQGSQMSHVSANSTIVTPHPPLNSTPSTFQL
LNNVRKPMTVGMTSSQSAAAETGIRTVEITRGPTDALGISIAGGKDSPLGDIPIFLAMIQ
ANGVAAKTHRLKVGDRIVSINSQSLEGLSHGDVVTMLKNAYGSIILQVIADTNISAIASQ
VESMSTSSCSETQPGEPEAPKPKSICLEKGADGLGFSIVGGFGSPHGDLPIYIKTVFSKG
AAAVDGRLKRGDQILSVNGESLEGTTHELAVAILKRQKGAVTLDVLS
NT seq
5904 nt
NT seq
+upstream
nt +downstream
nt
atgtatgaaaatgtcccaacagtctccacagtggagcgccagcaggtattgcaggctttg
gagcggctgcaggccaagatggcccagagggaggagtggacccacagtgagaggctgggg
gtgctgagggatgctctacagagcccactgctaggacacatcctcactctgcagcattca
atcaaacaactcaaagaccagctgaactgcatgcctccagacacctgcagtgatttcagc
ttctctaggaagggccagctgattgtcagtgccagccgcccagccagcagcctgtgcacg
tccattcccggcactgtgttgtccaacggctcggcccttgcctcccccgaccagctccag
agatggttctgcacctccgctaaggggaggcagacagagcacatcagcctgcctaagccc
ttgtctgggggcctgggcttcagtgtggtgggcctaagggccgaagggacaggggaccac
ggggtcttcatcagacacgtccagcctagtctgtgtgccggcagggatgggcgcatacag
gagaacgaccagatcctggtgatcaacgggacgcccctggaccagagtgtcacccagcat
caggccatcgctctcctgcagcagcctggggacagggtggatttagtggtggccagggac
cctgccaccatcacacagcatacacacaccctcccgccccaactcccgcctgggcccagt
cacaaggagcagtggggccacatggaggagatggagctgctgaacgacggctcgggcttt
gggattgttggaggcaaggccactggggtggtggtgcggactctggttccaaacagtgtg
gctgacaaggatgggcgcctgcgtacaggtgaccacatcctgcgtattggtgagaccccc
acaggtggcttggccagcgaccaggtggtcaaggtgctgcagggctgcgggagccacgtg
cgcatgctcatcgcccgtgacccctcgggacagtattcctcctccccgccgccccctccc
ctgcccgccgccagccccgtctctgtcttaccctctggagtcgaaccccagagtaggatc
cacaggacgcccaacctggagtgttatgagatccataaagtgcctctgaggaagaaggag
ggccagagcctggggatcaccatcatcggatacaactccttaacccgcgaagacgcggtc
ggggtgtttgtgaagaacgtggttcctgggagtgccgctgagcagagcggaaacatccgg
atctatgacaggacaatagagctagacggggtgagcctgcagggcttcactaaccaggag
gttctggaggtgatgaagcagacaggccagacggtcctcctcaccctggtcaggatgcgt
ttagcgtcacgtcaggatgcgtttagcgtcactctgattgtgcttgtccaccctggctcc
catgtccaccctgactccaccctgacgccaccgtccaccctgactccaccgtccaccctg
actccaccgtccaccccggctccaccgtccaccccggctccaccgtccaccccggctcca
ccgtccaccccggctccaccgtccaccccggctcccacgtccaccccggctcccacgtcc
accccggctcccacgtccaccccgactcccacgtccagctgtgtggaggagatctctctg
tctgagctggagctgaaggacaaatgggagcagtctctggggccacagtacgatgttctg
gtggttgaactggaccctgttattgaagatgatgctgaattacagaattacttcaagtat
tctattatttttttatcctggctgctacccatccacaccatgcgtctgggggtggagttg
gactcgtttgacggccaccactacatctcctctgtggctccagaaggccctgtggccaaa
cacggcctcctgagaccagaggacgaactactagaggtaaacgcggtgcagctgtacggg
aagtcgaggcgcgaggcggtggcgttccttcgtgaggttccccctcccttcaccctggtg
tgctgcagacacctgacagaggagaactcagactaccagcatgaccgggacgataagtgg
cgttcgcccagcactgctgctagcctctctgagattgaagccaagctgtcttctgtatgg
attagtcaggcataccgccgagaccctactggtgaccagcttcaggaccgagccaccctg
aaggagatctcagaggaggaccgagccaccctgaaggagatctcagaggaggaccgagcc
accataaaggagatctcagaggaggaccaagccaccctaaaggagatctcagaggaggag
aaagtgcccacatggaatgaagagggagagctggctctgtggtccccagacatccagttg
ttggagctggagaagagagagaaaggtctgggcttcagcatacaagactaccaggaccct
ctggacagggcaggcttggtcatcgtcatccactccctggtgcccggcagtgtggcagag
cgccatgggtacatgctccccgaggaccagctggtgtttgtcaacgacacctacctggac
acggtgagcctgtcccaggcaatggaggtgctgaatgctgccccatctggaacagtctac
ctgggcatccgcaagccactggtggggtttagcgattgctccatcctcccagaagtcctt
ggacaggaagaggacgaaaccgagctgatcctggacagtggcattnnctcacctctgatc
cctgccttgacccttaaaccaacccccaccagttttaaccccaccccaactcctaccctg
accaccatccccctccctccaggagaggagagggaaatggtagtggatgaagaggaacgt
nnggtggatgtgaatggtagagaggggcaaaccgtggattcctaccccagaaaacctcca
ccgtcgtggggagagtggatgagggtggaggagaaaggtggagatggtactgtggagaag
ctggagtccagagccctctttgatcagctctctctaggtcagtctgtgaattcctgggtg
gagactggggacagcgaggcggactcagactccaggaacggaagatcagaactcatcctc
acagacacagataccgactcggtgcatttgattggcacagagaggagaaagaggagtggc
cagggaggaggacgacacagtgatctacctgagagggaggaaggagagggagaggagacc
cctgccttcagtcactggggacccccacgcagagtggaggtgtggcaggaggatggcgag
tctcttggcatcagcatcgtgggcgggcacagcgtcatcaagagactgaagaatggagag
gaactcaagggcatctttatcaaacaggtactgccggagagcccagcgggacgcactcgc
tccctcaagactggagacaagatagcgctagtatcaggtgtggacctccagaatgccagt
catgaggaggcagtccaggtcatcaagacagctcccagtcccgtggtcttcatcgttcag
agcctctctgccacgccaaggcctgtctcactaacggggcccagttacagaaaacacaag
gcaaagagcagagtcatgccgaaagcagaagtaggaggtgcccctcccccgatgagactc
cccccgccttaccggccacccggtcagctgatagaggaccaggacgaagagttggaggga
gtcaaagagctgatcaggttgcgttacggggagctgtgcggggagctgctgtgtgtggag
ctggacagggaacgccagggcctgggtctgagcctggctggaaacaaggaccgctcctgc
ctcagcatcttcgtggtaggcatcagccccgggggccccgccgccaaggacggacgcatc
cgcgtaggggacgagctgctggagatcaacaaccaggtcctgtatggccgcagccacctg
aacgcctcggccatcatcaagagtgcctcgtccaaggtcaagattaccctgatcaggaat
gaagatgctatcaaccagatggccgttcccccctttccacaccctcctgttgtcctctcc
tccactgaagtgagtcctattcacacaccccccaaaccagctgcagtagcatccccggcc
cccacagagaagtctcaaaccccagagagcctggccctcagcaggggacccctggaggcc
tccatctccatcagcgaggtgaagtccagtgttgggtccagtgggagcacagctacggag
cttgtgtccagagaagcaacactcatgatcctccgagagacttcgtcaaagaaggcctca
gagaacgaggccgagtcttctgagagtgtgactgtgccggctgccgagacccccctgggg
cagactgcgaacctgtccaaaacctgtcggctctcctgtaagctgcctgtggtgagctct
gtgaaaggggagctggtgcccccccctgcctctttcctaccttcctcctgcaccagccca
gactttgagtactgcagcaaagacccatccacgtgccctatcgttccaggccaggagata
atcatagagatcgccaagggtcgctctggcctgggtctcagcattgtagggggaaaagac
acccagctggatgccatagtgatccatgaggtatatgaggagggggcggcggcacgtgat
ggacgactctgggctggagatcagatcctggaggtaaatggtgtggacctgcgtagcgtg
gcccatgaggatgccatcacagccctaaggcagaccccggccaaggtgtatctaaaggtt
ctacgggacgaggcgaggtaccgcgaccaggagaacctagatgtgttcagtgtggaactg
cagaaaaaggctggccgtggcctgggcctcagtatcgtcggcaagaggaaaggcacaggg
gtgttcatctcggacgtggtgaaagggggcgccgccgagctggatggccggctgatgcaa
ggggaccagattatctctgtcaacggagatgacatgaggtctgccttgcaggagacggta
gctgccattctcaagtgtgccaggggggtggtgctcctggagctgagccgactgaaggct
gcctcctggctctcttccagacgtccctcccagggaagccagatgagtcacgtgagtgcc
aacagcacaatcgtcacgccccaccccccgctaaactccaccccttccacctttcagctc
ctcaataacgtcaggaagccaatgactgtgggcatgacatcatcacagagcgcagctgca
gaaacaggtatacgcactgtggagatcacaaggggtcctactgatgcgttggggatcagt
atagctggggggaaggacagtcctctcggggatatccccatcttcctggccatgatccag
gccaacggggtggcagccaagacgcaccggctcaaggtgggtgataggatcgtgagtatc
aactcccagtctctggaaggcctgtcccatggggatgtagtcaccatgctgaagaatgcc
tacggcagcatcattctccaggtgattgctgacaccaacatcagtgctatagccagtcag
gtggagagtatgtcgactagcagctgctccgagacacagccaggggaaccagaagccccc
aagcccaagagtatctgcctggagaagggtgctgacggcctgggcttcagcatcgtagga
ggcttcggaagccctcatggagacctgcccatctacatcaagactgtcttcagcaagggg
gcagcagcggtggacgggcgtctgaagaggggtgaccagatcttgtctgtgaacggagag
agtctggaagggaccacacacgagctggctgtggccatactgaagagacagaaaggggcc
gtcaccctggatgtgctgtcctag
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