Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139407182
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Entry
139407182 CDS
T10872
Name
(RefSeq) inverted formin-2-like
KO
K23958
inverted formin-2
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
139407182
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
ocla04812
]
139407182
Cytoskeleton proteins [BR:
ocla04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Formins
139407182
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FH2
Drf_FH3
Drf_GBD
FH3_FHOD1-3
WH2
Motif
Other DBs
NCBI-GeneID:
139407182
NCBI-ProteinID:
XP_071006822
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All DBs
Position
4:69099622..69120636
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AA seq
1213 aa
AA seq
DB search
MAAKASKGKWGALKEHLTSSPPDRDAHLEANLENSVPELCIRLLQVPTVVNYSGVRRRLE
GSDQEWMVQFLELNGLDLLMEALERLSGRGCARIADALLQLTCVACVKAVMNSSAGLHFI
LDNEGYVRTLSQALDTSNTMVKMQVFELLAALALFNPQGHHLAMDALEHYKSVNMQQYRF
SVIMNELHATDNVPYMVVLMSVVNVIIFGVEDLRKRDKLRKEFIGLQLLQLLPKLRETED
VDLNIQCEAFEDTMAEDEEEMERVYGGIDMSSHQEVFTTLFTKLSSSPASVQLLSILQAL
LLVGPEQSEVWLALEALADRATLLAQDPDVDSTKRLMERLVSSKGQQGSPKVKTTDRGVQ
IDRSICPSGLSDVLIKESTTPVATSPPPHLPPPLPSMRTFVPPLPGFSGMPPPGLPPPPP
PLPQMRHGGPPPPPPLPGMMGPPPPPPGRMGPPPPPPLPGMIGPPPPPPLPGMMGPPPPP
PLPGMMGPPPPPPLPGMMGPPPPPPLPGMMGPPPPPPLPGMMGPPPPPPLPGMMGPPPPP
PLPGMMGPPPPLGGDEIIVAQSVQMRSCYASSPKVGRCPTLRMKKLNWQKLPSRVVTDSH
SMWTSVQVDSLEPDYSSIEELFCLPVTDSKAKGSTPAVKQEPKEISFIDAKKNLNLNIFL
KQFRCSHKDFVAMIQKGDRSKFDVEVLKQLQKLQPEKHEIENLKSYQGEREKLAGVDQFY
LQLLAVPCYALRIECMLLCEEISSVLQMMQPKVKLLDEACESLRVSTRLPSFCMLILDVG
NFLNYGSHTGNAEGFKISTLLKLTETKANKSRITLLHHILEEAEQNHDDLLNLPDDLEIC
EKAARVNLESLQSEASLLIKRLKDSEKKVASSSVAAIKEQYLTAIQGSQEACRELEVRFA
SIDRKKEDLAQYLCEDSSRLSLEDLFSTLHSFRGLFIKALKDNQTRREQAIKAEKRKKQL
EEEDSKRPRGENRKIIRKAPPVQEGCIIDHLLSDIRKGYALRKTKHQADRTSLPSEDKKG
DSIQPGEQCTKLKGTSAIDAKEEVEKGTSPIDLGQQSGDPVVVESGLPTDPSLQSSSPKT
PGPSNLHTTTKDHIQSEDLKPGMDSSTDRQLKESPEGEGFKAAESKVENVNRNAFSAAGD
GPKSRDAETDGNRESGADGNGLEKTPSSESPSTTADVDAESKHAQKRGSTKRHGKAKRKG
KDHTKLKKVCVLQ
NT seq
3642 nt
NT seq
+upstream
nt +downstream
nt
atggcagccaaggcatcgaaagggaagtggggggccctgaaggaacacctgactagcagc
ccccccgaccgagatgctcaccttgaggccaacttggagaactcagttccagagctatgc
atacgactgctacaggtacccacagtggtcaactactcaggggtgcggaggcgtctagag
gggagtgaccaggaatggatggtgcagttcctggagctcaacggactggatctgctgatg
gaggccctggagaggctgtctggccggggttgtgcccgcatcgctgacgccctcctccag
ctcacttgtgtggcctgtgtgaaggcagtgatgaactcctcagctgggctgcactttata
ctggacaatgagggctacgtcaggaccctgtcacaagccctggacacgtccaacaccatg
gtaaagatgcaggtgtttgagctgctggcggccctcgccttgtttaacccacagggacac
cacctggccatggatgccctggagcactataaaagtgtgaatatgcagcagtaccgcttc
agcgtcatcatgaatgagctgcatgcgactgacaatgttccgtacatggtcgtcctcatg
agtgtggtcaatgtgatcatcttcggggtagaagacctgaggaagagggacaaactacgc
aaagagttcatcgggcttcaattactacaattacttccaaaacttagagagaccgaggat
gtggacctgaacatccagtgtgaggcctttgaggacaccatggcagaggatgaggaggag
atggagagggtgtacgggggcatcgacatgagcagtcaccaggaagtcttcaccacactc
ttcaccaaattgagtagctcccctgcatcggtgcagctgctgtcgatcctgcaggctctg
ttgttggtaggtccggagcagagcgaggtgtggctggccctggaggccctggctgaccgc
gctactttgctggcacaggaccctgatgttgactccaccaagcgcctgatggaacgtctg
gtgtcctccaagggtcagcaagggtcacctaaggtcaagaccacagaccggggcgttcag
attgaccgatcaatctgtccatcgggtctatcagatgtcctcattaaagaatctaccacc
cctgttgccacttcacctcctcctcatctaccaccacccctaccaagcatgagaactttt
gtcccaccacttcctggcttctctgggatgcctccccctggcctccctcctccgccacca
cctctaccacagatgagacatggaggtccaccgcctcccccacccctgccaggcatgatg
ggtccaccgcctcccccaccaggcaggatgggtccaccgcctcccccacccctgccaggc
atgataggtccaccgcctcccccacccctgccaggcatgatgggtccaccgcctccccca
cccctgccaggcatgatgggtccaccgcctcccccacccctgccaggcatgatgggtcca
ccgcctcccccacccctgccaggcatgatgggtccaccgcctcccccacccctgccaggc
atgatgggtccaccgcctcccccacccctgccaggcatgatgggtccaccgcctccccca
cccctgccaggcatgatgggtccaccgcctccccttggtggcgatgaaattatagtggcc
cagagtgtgcagatgcgatcctgctatgcctcttcacccaaggtgggccgctgccccaca
ctgcgtatgaagaagctcaactggcagaagctgccatccagagtggtgactgatagtcac
tccatgtggacctcggtacaggtagattctctggagcctgactactccagtattgaggag
ctcttctgtctgccagtgactgactcaaaagccaaaggcagcacccctgcagtcaaacag
gagcccaaagagatttctttcattgatgccaagaaaaatcttaacctgaacatattcttg
aaacaattcagatgctcacataaggactttgtggccatgattcaaaaaggtgaccggtcc
aagtttgatgtggaggtgctgaaacagctgcaaaagctacagccagaaaagcatgagatt
gagaacctgaagtcctaccagggagagcgggagaagttagctggtgtggatcagttttat
ctccagctcctagctgttccatgctacgctctgaggatcgagtgcatgttgctgtgtgag
gaaatcagctcagtgttacagatgatgcagcctaaagttaagctgctggacgaggcctgt
gagagtctgagagtgagcactcgactgccaagcttctgcatgctcattctggacgttgga
aacttcctcaactatggaagccacacagggaacgctgagggcttcaagatcagcacactg
ttgaaactcactgaaaccaaggccaataaaagtcgcatcacgctgctccaccacatccta
gaggaggctgagcagaaccatgatgacctgttgaaccttccagatgatctcgagatctgt
gagaaggctgctcgtgtgaatttggagtctctccagtcagaggcgagcttgctcatcaag
cggttgaaagattcagagaagaaggtggcttcctcctctgtggcggccatcaaagagcag
tatctcactgccatacagggaagccaggaggcctgcagggaactggaggtgaggtttgcc
tccatcgacaggaagaaggaggatctggcacagtatctgtgtgaggactcatcccgtctc
tccctggaggacttgttcagcactttacattccttcaggggactcttcatcaaagctctc
aaggacaatcagacccgccgagagcaagcgattaaggctgagaagaggaagaaacagctg
gaagaggaggattccaagagaccaaggggggagaacaggaagataattcgtaaagccccc
ccggtccaggagggctgcatcattgaccacctgctgtctgacatcaggaaaggctatgcg
ctgaggaaaaccaagcaccaggccgacagaaccagcctgccttctgaggacaagaaaggg
gacagcattcagcctggtgaacagtgcaccaagcttaagggaacatctgctatagatgcc
aaagaggaagttgaaaaggggacttcacccattgacctaggacaacaaagcggagatccg
gtcgtagtggagtccggcctccccacagacccctcacttcagtcgagttctcccaaaaca
ccaggcccctcaaaccttcataccaccaccaaggatcacatccagagtgaagacctcaag
cctgggatggattcctctactgaccgccagctcaaggagtccccagagggggagggattt
aaggccgctgaatccaaggttgagaatgtgaacaggaatgcattctcagctgctggggat
ggtccaaagagcagagatgcagagaccgatgggaatagagagagtggagctgatggaaat
gggttagagaagactccatcatcagagtccccctcaaccacagctgatgtcgacgcagaa
tccaaacatgcacagaaacgggggagtactaagagacatggcaaagccaagcgcaaagga
aaagaccacactaaacttaaaaaggtgtgtgtgttacaatga
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