Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139407190
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Entry
139407190 CDS
T10872
Name
(RefSeq) vascular endothelial growth factor A-like isoform X1
KO
K05448
vascular endothelial growth factor A
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla04010
MAPK signaling pathway
ocla04020
Calcium signaling pathway
ocla04370
VEGF signaling pathway
ocla04510
Focal adhesion
ocla04518
Integrin signaling
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
139407190
04370 VEGF signaling pathway
139407190
04020 Calcium signaling pathway
139407190
09133 Signaling molecules and interaction
04518 Integrin signaling
139407190
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
139407190
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
ocla04052
]
139407190
00536 Glycosaminoglycan binding proteins [BR:
ocla00536
]
139407190
Cytokines and neuropeptides [BR:
ocla04052
]
Cytokines
Growth factors (RTK binding)
139407190
Glycosaminoglycan binding proteins [BR:
ocla00536
]
Heparan sulfate / Heparin
Growth factors/receptors
139407190
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDGF
VEGF_C
Presenilin
Motif
Other DBs
NCBI-GeneID:
139407190
NCBI-ProteinID:
XP_071006843
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Position
4:complement(69467553..69493279)
Genome browser
AA seq
311 aa
AA seq
DB search
MELSLWPSWVLYTSISCTKYLERSCFRSEAECYVILFHTMFGLAGIGHCRGCAMISHFSF
TLQEESEFLSVCGVSMSFPTCAAPGYNVFSASVQKVPSFVGLREGLKEGVSTEAYQSHSE
RGNERDTLMVISFMEVYNKSLCQPRELLVEIAQEYPEEVEHIFIPSCVVLTRCAGCCNDE
MLECTPTSTHNMTMEIKRIKPQRQENNIFMSFTEHSACECRPKKEVKEQRQKKPRKGKGK
GQKRKRKKNHDQKNREAQCEPCCDGCSERRKQGFIQDPLTCQCSCRNSNAHCRARYLELN
ERTCRCDKPRR
NT seq
936 nt
NT seq
+upstream
nt +downstream
nt
atggaattgagtctctggccctcatgggttctttacacaagcataagttgcacaaaatat
ttggaaaggagctgctttcgatcagaagctgaatgttatgtgatattgtttcatactatg
tttggtttggctggtataggacactgcagggggtgtgctatgatttcccatttctccttt
actctccaagaggaatcagagtttttgtctgtctgtggtgtctcaatgtctttcccaaca
tgtgcagccccaggctacaatgtttttagtgcttcagtgcagaaggtaccaagctttgtg
gggctgagagagggattgaaagagggagtcagtacagaagcataccagagccacagtgag
agaggaaatgagagagacaccttgatggtgatatccttcatggaggtgtacaataagagc
ctatgtcagcccagggagctgctggtagagatcgcacaggagtacccagaggaggtagaa
catatctttatcccatcctgtgtggtgctgacgcgctgcgcaggctgctgcaacgatgag
atgctagagtgcacgccaacctccacgcataacatgaccatggagataaaaagaataaaa
ccccaaaggcaagaaaataatatctttatgagttttacagaacacagtgcgtgtgaatgc
aggccaaagaaagaagtgaaagaacagagacaaaaaaaaccccggaaaggcaagggcaaa
ggccaaaagagaaagcgaaagaaaaaccatgaccaaaagaatcgtgaagctcagtgcgag
ccatgttgtgatggctgttcagagaggaggaagcaggggttcatccaggaccctctgacc
tgccagtgttcctgcagaaactccaatgcccactgccgggcgcgttacctggagctcaac
gagaggacctgcagatgtgacaagccaagaagatga
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