Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139407220
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Entry
139407220 CDS
T10872
Name
(RefSeq) poly [ADP-ribose] polymerase 1
KO
K24070
poly [ADP-ribose] polymerase 1 [EC:
2.4.2.30
]
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla03410
Base excision repair
ocla04210
Apoptosis
ocla04217
Necroptosis
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
139407220
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
139407220
04217 Necroptosis
139407220
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ocla03032
]
139407220
03036 Chromosome and associated proteins [BR:
ocla03036
]
139407220
03400 DNA repair and recombination proteins [BR:
ocla03400
]
139407220
Enzymes [BR:
ocla01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.2 Pentosyltransferases
2.4.2.30 NAD+ ADP-ribosyltransferase
139407220
DNA replication proteins [BR:
ocla03032
]
Eukaryotic type
DNA Replication Termination Factors
Other termination factors
139407220
Chromosome and associated proteins [BR:
ocla03036
]
Eukaryotic type
Centrosome formation proteins
Centriole proteins
139407220
DNA repair and recombination proteins [BR:
ocla03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Other BER factors
139407220
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PARP
PARP_reg
zf-PARP
PADR1_N
WGR
Zn_ribbon_PADR1
BRCT
BRCT_2
Motif
Other DBs
NCBI-GeneID:
139407220
NCBI-ProteinID:
XP_071006899
LinkDB
All DBs
Position
4:71075517..71088940
Genome browser
AA seq
1014 aa
AA seq
DB search
MADAQEDKLYKAEYAKSGRASCKKCKENIAKDSLRMAIMVQSPMFDGKVPHWHHFSCFWL
RASAQSPADIAGFSDLRWEDQEKVKKAIETGGAAGGKGDVKGGAKGEKTLNDFAVEYAKS
NRSTCKGCEQKIEKDQIRVSKKTIDPEKPQLGLIDRWYHTACFVGRREELVFKQEYSAAQ
LKGFNTLRVEDKEELKRRLPAVKSKGKRETDEVDGEGASKKKKDEEEKKKVDLQMKEQSQ
LIWGIKDKLRQFCSTNDMKELLIANGQEVPSGESNVVDSLGDCMAFGALKPCEECQGQLV
FKSDAYYCTGDLSAWTKCVFKTQLPNRKGWVIPKEFHELPFLKKFKFKRQDRVFPKVAPP
PASTASAPVPSASSDPSIPLPEGAPADKPLTGMKLLTVGKLRQNKDELKAAVEELGGKIT
GTANKATLCLSTKKEVEKMSKKMEEAEEAGVRVVSEDFLTDIKSSGKALQELVSLHAISP
WGAEVKLETQVQSAASRSGAMAGKSTKRVKEEEGVSKASKKMKLTVKGGAAVDPDSCLEN
SAHVLDQNGKIFSATLGLVDIVRGTNSYYKLQLLEDDVHKRYWVFRSWGRVGTTIGGNKL
DKFHDKNSAMDNFLGVYEEKTGNAWGSSHFTKYPNRFYPLEIDYGQDEEAVKRLTASAGT
NSLLAKPVQELIRTIFDVESMKKAMVEFEIDLQKMPLGKLSKRQIQSAYALLSEVQQAVS
DSSSESHILDLSNRFYTLIPHDFGMKKPPLLSNLDYIQAKVQMLDNLLDIEVAYSLLKGG
AEDNKKDPIDINYEKLKTKIEVVDKTTKEAEIILQYVKNTHAATHNTYTLEVEEIFKIVR
EGEYQKYRPFQDLPNRQLLWHGSRATNYAGILSQGLRIAPPEAPVTGYMFGKGVYFADMV
SKSANYCHTSQSDPTGLLLLGEVALGNMHELKKASHITKLPKGKHSVKGLGRNAPDPSAT
VTLVDGVQVPLGKGTNTNIDDTSLLYNEYIVYDVAQVNLKYLLKIKFNYQMSMW
NT seq
3045 nt
NT seq
+upstream
nt +downstream
nt
atggcagatgcacaagaggacaagctttacaaagctgaatatgccaaaagtggacgtgct
tcgtgcaagaaatgcaaggaaaacatagcaaaggattcgctgcggatggctatcatggtg
cagtcgcccatgtttgatggtaaggtgccccactggcaccacttctcctgcttctggctg
cgggcgtctgcccagtctcctgcagacatcgctggattctctgacctgcgatgggaggac
caggagaaggtcaagaaggccatcgagactgggggagctgcaggaggaaaaggtgatgtg
aagggtggggccaaaggagagaagactctgaatgactttgcagtggagtatgccaagtcc
aatcgcagcacatgtaaagggtgtgagcagaaaattgaaaaggaccagatccgtgtatct
aagaagacgattgacccagagaagccccagctggggttgatagaccgctggtaccatacc
gcctgctttgtgggccgcagggaggagctggtcttcaaacaagagtacagcgccgctcag
ctcaaaggctttaacacactcagggtggaggacaaggaggagctgaagagaaggctcccc
gctgtcaaatctaaaggaaagagagagactgatgaggtagatggagaaggggcatcgaag
aagaagaaggatgaggaggagaagaagaaagtggacttgcagatgaaggagcagagccag
ctgatctggggcatcaaggacaagctcaggcagttctgttccaccaacgacatgaaggag
ctgctcatcgccaacggacaggaagtgccctctggagagtccaatgtggtggacagccta
ggagactgcatggcctttggcgcactgaagccctgcgaggagtgccagggccagctggtg
ttcaagagcgacgcctactactgcactggagacctctccgcctggaccaagtgtgtgttc
aagacccagctgcccaaccgcaagggctgggtcatccccaaggagttccatgagcttccc
ttcctcaagaagttcaagtttaagagacaggaccgggtgttccccaaggtggcccctccc
ccagcctctactgcatccgctcctgtccccagtgcctccagtgatcccagtatacccctc
ccagagggagcccctgcagataagcctctgacagggatgaagttgctgactgtgggcaag
ctgagacagaacaaggacgagctgaaggctgccgtggaggagctgggcgggaagatcacc
ggcacagccaataaggctactctctgcctcagcaccaagaaggaagtagagaagatgagt
aagaagatggaggaggcagaggaggcgggcgtgcgcgtggtctcagaggacttccttact
gacatcaagtcctcgggcaaggccctgcaggagctggtctccctgcacgccatctccccc
tggggggccgaggtcaaactagagacccaggttcaatcagcagcctccaggtctggagcc
atggctggcaagagcaccaagagggtgaaggaggaggaaggtgttagcaaggccagtaag
aagatgaagctgactgtgaaaggaggggcagcagtggacccagactcatgtctagagaac
agtgctcatgtcctggatcagaatggcaagatcttcagcgctacgctaggtctggtggac
atcgtcaggggtaccaactcctactacaaactgcagctgctggaggacgatgtgcataaa
cggtactgggtgttccgctcctggggcagagtgggcaccaccatcgggggaaataagctg
gataagttccatgataagaactctgccatggacaacttcctgggtgtgtacgaagagaag
acaggcaacgcctggggctcttcccacttcaccaagtatcccaacaggttctaccctctg
gagatcgactacggtcaggatgaggaggcggtgaagaggctgacagccagtgctggcaca
aactctctgctagccaagcctgtccaggaactcatcaggaccatctttgatgtggagagc
atgaagaaggccatggtggagtttgagattgacctccagaagatgccgctggggaagctg
agtaagaggcagattcagagtgcctacgccctcctcagtgaggtgcagcaggctgtgtcg
gacagttcctcagagtcccacattctggacctgtccaatcgcttctacaccctcatacct
cacgactttggcatgaagaaaccaccgctgctcagcaaccttgactacattcaggctaag
gtccagatgttggacaacctgctggacattgaagtggcctacagtctgctgaaaggaggg
gccgaggataacaagaaggaccctatcgacatcaactatgagaaactcaaaaccaagatt
gaggttgttgacaagaccacaaaggaggcagagatcattctgcagtatgtcaagaacaca
cacgctgctacacacaacacctacacactggaagttgaggagatcttcaagatcgttagg
gagggagagtaccagaagtaccgccccttccaggatctgcccaatcgacagcttctgtgg
cacggttctcgtgccaccaactacgctggtatcctttctcagggtctgcgtatcgcccct
cctgaagcccccgtgacgggttacatgtttggcaaaggtgtgtactttgccgacatggtg
tccaagtcggccaactactgccacacctcccagtccgacccaactggcctacttctactg
ggagaggtcgccctcggaaacatgcatgaactgaagaaggcctcacacatcacaaaacta
cccaagggtaaacacagtgtgaaagggttgggtcgaaacgccccagatcctagtgccact
gtcactttagtagatggggtgcaagtgcctctgggaaaaggaaccaacaccaacatcgac
gacacgagtctgctgtacaacgaatacattgtgtatgatgtggcacaggtgaacctgaag
tacctgctgaagatcaagttcaactaccagatgtccatgtggtga
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