Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139407251
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Entry
139407251 CDS
T10872
Name
(RefSeq) structural maintenance of chromosomes protein 6 isoform X1
KO
K22804
structural maintenance of chromosomes protein 6
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Brite
DNA repair and recombination proteins [BR:
ocla03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
SMC5-SMC6 complex
139407251
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GFIT
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NCBI-GeneID:
139407251
NCBI-ProteinID:
XP_071006965
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Position
4:complement(71605118..71623824)
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AA seq
1091 aa
AA seq
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MSKRKSNSIGESPHKRVRSTEVHDEDNEVGPSQPPVPLGSHTTVGEVGIVESISLKNFMC
HSLLGPFAFGSNVNFVVGNNGSGKSAVLTALMVGLGGKATTTNRGSSLKGFVKEGESSAD
VSITLRNKGRDAYKPEVFGQAIIVDLKITREGMRTYKLKSKAGHLVSAKKDELLAILDHF
NIQVDNPVSMLTQEMSKHFLHSKGEGDKYRFFMKATQLEQMKEDYTYIITTKNVTLDTVE
KHEECLEGLKRKYLEKEDRVKSLASLDDMHSKLEELKNQMAWALVSEMEKEVKPMREKLQ
SEERSTIKYDQKVDEWKAKVVEAEKKYKGIREQLEAITVRVQQLEPQSAELKNEAQSRSK
AFNTAQASVHRFKTNLRDLEKDKDQLARRINELKLSISQTSGAETQVRVERMEKLQTDLD
TLNFQDSTLGQQMEQFQQAVSRAKDELEKMMREEEDLKRSMEAIRRKLQTMEGSRSDRLR
RFGEKMPALLAAIEDADRKGQFRKKPVGPLGYCIRLKDHEQALAVEKCLGSLMVAFTCDN
HEDEKLLQGLMRGYYQGGRRPQIITCQFFNRVHDTSRRAVNHPDYPSVLQSLEIEDPVVA
NCLIDQRGIETILLIKSPTEARRVMQGRQPPRNCYQAFTKEGDQCYNNRYYSNDQRRCDY
LSRDVEEEIRQLQEEMRNKEAHLDRFSQQKQRVEEDIRNNNSLLKRAYDDRKRAKDKFRR
LQQEISDLQNVEEPQSEDLKPLEEELEEINNKISAGRAESEEARRKMAQLKASWEEVEQR
YRQHKDSISTVAEEAEPIKEELSKSDQDVEKSKHHKKHYEDKRKVHINTIQALKASLDLK
EQELTASVVKATEICPERSEVRRTARSLDSEISRLKLKISTQQDQQGDREEVIRQYQEAL
ENYSNINQQVKCLKRFIQVLCKIMDDRHRVYTELRRFLSVRCKMYFDSMLSQRGYIGKMM
FEHKNETLSISVQPGVGDKAALSDMRSLSGGERSFSTVCFVLSLWAIAEAPFRALDEFDV
YMDMVNRRISMDMMLKIASSQRYRQFIFLTPQSMSSLPVNNLIRILRLKDPDRGQTALPF
GQRNEEEEEEE
NT seq
3276 nt
NT seq
+upstream
nt +downstream
nt
atgtctaagaggaagagcaactcaattggagagagcccacacaagagagtcagatccaca
gaggttcatgatgaagataatgaagtgggtcccagccaaccccctgtgccactaggatcg
catacgactgttggagaggtgggcatagtggagagcatctccctgaagaactttatgtgc
cactctctgctggggccatttgcgtttgggtccaatgtcaactttgttgtcggcaacaat
ggaagtggaaagagtgctgtcctcacagctcttatggtgggcctgggagggaaagctaca
accacaaacagagggtcctccctgaagggatttgtgaaggaaggagagagttcagctgat
gtctccataacactgcgtaacaagggcagggatgcctacaagccagaagtgttcggccag
gctatcatagtagacctcaagataacccgtgagggcatgaggacctacaagctcaagagc
aaagcaggtcatcttgtgtctgcgaagaaggatgaacttttggccattctggatcacttt
aacatccaggtggataaccctgtatctatgctaactcaagagatgagcaagcactttctg
cactccaaaggagaaggggataagtacagattctttatgaaagccacacagcttgagcag
atgaaagaggattacacctatatcataacgactaaaaatgtcactctagacactgtggag
aaacacgaggagtgtctggaggggttaaagaggaagtacctggagaaagaggaccgggtc
aaaagcctggcctcgctggacgacatgcacagtaaactggaggagctgaagaatcagatg
gcttgggctctggtgtctgagatggagaaagaggtgaagcccatgagagagaagctccaa
tcagaggagaggtccaccatcaaatacgaccagaaagtagacgagtggaaggccaaggtg
gtggaggcggagaagaagtacaagggtatccgggagcaactggaggccatcactgtgagg
gtgcagcagcttgagccacagagtgctgagctgaagaacgaggctcagagcagaagcaag
gccttcaacacagcccaggccagtgtacacagattcaagaccaacctaagagacctggag
aaggacaaggatcagctcgccaggagaattaatgaactcaagttgagtatcagccagacg
tctggtgcggagacccaggtgcgtgttgagcgcatggagaagctgcagacagacctggac
actctgaacttccaggactctaccctaggccagcagatggaacagttccagcaggctgtg
tcccgggccaaggacgagctggaaaagatgatgcgagaggaggaggatctgaagaggtct
atggaggccatcaggaggaagttgcagaccatggagggcagccgctccgaccgcctgcgc
cgcttcggggagaagatgcccgcgctgctcgccgccatcgaggatgctgacaggaaggga
cagttcaggaagaaaccagtggggccgctggggtactgtatccgtctgaaggaccatgag
caggccctggccgtggagaaatgtcttgggagcctgatggtggccttcacctgtgacaac
cacgaggacgagaagttgctgcagggccttatgagagggtactaccaggggggtaggaga
ccccagatcatcacctgccagttcttcaacagggtccatgacaccagtaggcgggctgtg
aaccaccctgactacccgtcagtcctacagtctctggagatcgaggacccagtggttgcc
aactgcctcatcgaccagaggggcatagagaccattctgctcatcaagagtcctacagag
gcccgcagagtgatgcagggcaggcagccccctagaaactgctaccaggccttcaccaag
gagggagaccagtgctacaacaaccgctactactccaacgaccagaggaggtgtgactac
cttagcagagacgtagaggaggagatcaggcagttgcaggaagagatgcggaacaaggag
gcccacttggatcggttcagccagcagaagcagagggtggaggaggacatcaggaacaac
aacagtctcctgaagcgggcctacgacgacaggaagagggccaaggataagttcaggagg
ctgcagcaggagatcagtgacctgcagaacgtggaggaaccccagtctgaggacctcaag
cctctggaggaggagctggaggagatcaacaataagatttcagcaggtcgtgctgagagc
gaggaggcccgtagaaagatggcccagctgaaggcttcctgggaggaggtggagcagagg
taccgccagcacaaagactccatcagcactgtggccgaggaggccgaacccatcaaggag
gagctgagtaagagcgatcaggatgtggagaagagcaagcaccataagaaacactacgag
gacaaacgcaaggtccacatcaacaccatacaggccctgaaggccagcctggatctcaag
gagcaggagctcacggcttctgtagtgaaggccacagagatctgtccagagcggtccgag
gtgcgccggacagccaggagtctggacagcgagatcagccgtctgaagctgaagatcagc
acccagcaggaccagcagggcgaccgcgaagaggtcatcaggcaataccaagaggccctt
gagaactacagtaacattaaccagcaggtgaagtgcctcaagcgcttcatccaggtcctg
tgtaagatcatggacgatagacaccgagtctacacagagctgaggaggtttctctcagtg
cgttgcaagatgtactttgactccatgctgtcacagagaggctatatagggaagatgatg
ttcgagcacaagaacgaaaccctatccatctcagtccagccaggtgtgggagataaggct
gctctgagtgacatgcgctctctgtctggaggagagcgctcgttctccactgtctgtttc
gttctctctctctgggccatcgctgaggcccccttccgcgccctcgatgagtttgacgtc
tacatggacatggtgaatcgaaggatatccatggacatgatgttgaaaatcgcttctagc
caacgttaccgacagttcatattcctcaccccacagagcatgagctctctcccagtcaac
aacctgatccggatcctacggctgaaagaccctgaccgtggccagacggctcttcccttt
ggacagaggaatgaggaagaggaagaggaggagtga
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