Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139407291
Help
Entry
139407291 CDS
T10872
Name
(RefSeq) glycerophosphocholine phosphodiesterase GPCPD1-like isoform X1
KO
K18695
glycerophosphocholine phosphodiesterase GPCPD1 [EC:
3.1.4.2
]
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla00564
Glycerophospholipid metabolism
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09100 Metabolism
09103 Lipid metabolism
00564 Glycerophospholipid metabolism
139407291
Enzymes [BR:
ocla01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.2 glycerophosphocholine phosphodiesterase
139407291
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GDPD
CBM_20
C2_GDE1
TreTu_C
KGK
Motif
Other DBs
NCBI-GeneID:
139407291
NCBI-ProteinID:
XP_071007039
LinkDB
All DBs
Position
4:complement(76202361..76224802)
Genome browser
AA seq
674 aa
AA seq
DB search
METTQVTLAVRGDTSPGEVIAVVGSCEALGAWCYQRAVTLQPAEHDGTLWKRIISVPRGA
VSTYRYFKGHFLESKSAGGPCQVIVTKWETHQQPRLMSPTESHLDIDNGQFGFHNGLECV
DSGWLTCQTEIRLRLHYSKTSPVSITKKKYKKSRFRIKLTLEGVEEEEEEDDEEQEQSSV
AWHKMTTTLETSMISGDGYKSRHSQPECGYALEASQWTEYVIHSMDPDNLELTFDFFEED
MGEHVVPGDAHPGTVGTACLLSSFFVESGKDTGVVTLPIMKRNSRQTLGKVRVDYLVIRP
IEGLQCDMSSSFTKYWRKRSAPLDVGHRGAGSTHAAKHTKVRENTIASFKSAANHGAAYV
EFDVHLSKDCIPIVYHDLTCCISTKKKGDKLSLDLFEVPVKDLTYNQLQQLKLGHASALK
VNDHKDDDEEEEVDEHQPFPSFSQIFQAVPENVGFNIELKWVCQMKDGSWEGNLSSYFNM
NLFLDIILTCVLQRAGKRRIVFSCFDPDVCTMVRQKQNKYPILFLTQGISEIYPELMDIR
CRTTQIAMSFAQSENLLGISAHTEELLQNLEHIREAQSKGLVVFCWGDLNNDHDNRTKLR
EQGIDGLIYDRICDDQVEQPNIFKVEEQHTLQETLKSFVCSCYTIPCQAAPVCPSSISKE
HNGSAESDSGLSSS
NT seq
2025 nt
NT seq
+upstream
nt +downstream
nt
atggagacaactcaagtgactttggcagttaggggagacacatccccaggtgaggtgata
gccgtggttggtagctgtgaagctttaggagcctggtgctatcagagagctgtgacccta
caacctgctgaacacgatggcacattgtggaagaggatcatcagtgtgcccagaggtgct
gtgtcaacctatcgctatttcaaaggccacttcctggagtcaaagagtgcaggtggtccc
tgtcaggtgatagtcactaagtgggagacccaccagcagccacgcctgatgagccccaca
gaatcacaccttgatattgacaatggccaatttggattccacaatggcttagagtgtgtg
gactctgggtggctgacgtgccagacagagatccgtttacgtctgcactactcaaagacg
tctcctgtatccatcaccaagaagaaatataagaagtctcgcttcaggatcaagctgacg
ctggaaggtgtagaagaggaggaggaggaggatgatgaagagcaggagcagagttcggtg
gcgtggcacaagatgaccaccacgctggagaccagtatgatcagtggagatgggtacaag
tcccgccactcccagcctgagtgtggttatgccctggaggcctcacagtggacagagtac
gtcatccactccatggaccctgacaacctggaactcacctttgacttctttgaggaggac
atgggggagcatgtggtgccaggggatgcccacccggggaccgtgggtacggcctgcctt
ctctcctcattctttgtggagagtggcaaggacacgggtgtggtcactctgcccatcatg
aaacgcaactccagacagaccctgggcaaagtccgagtggactacctggtgatccgtcct
atcgagggactgcagtgtgacatgagctcgtccttcaccaagtactggaggaagaggagt
gcccccctggacgtgggccacagaggggccggcagcacacacgcagccaaacataccaaa
gttagggagaacacaattgcctcgtttaaaagtgctgccaatcatggggctgcctatgta
gagtttgacgtccatctctccaaggactgcatccccatcgtgtaccacgatctcacctgc
tgcatctccactaagaagaaaggagacaaactctctctggacctgtttgaagttcctgtc
aaagacctcacatacaaccagcttcagcagctcaagttgggccatgcttctgccttgaag
gtgaacgaccacaaagatgatgatgaagaggaagaggttgacgagcatcagcccttccct
tccttttcccagatattccaagcagtgcctgaaaatgtgggcttcaacatcgagctgaag
tgggtttgtcagatgaaggatggttcgtgggaaggaaacctgtcctcgtacttcaacatg
aacctgttcctggacatcatactgacctgtgtgctgcagagagctggcaagagacgcatc
gtcttctcctgcttcgaccctgacgtctgcactatggttcgtcagaagcagaacaagtac
cccatcctgttcctgacccagggcatctctgagatctacccggagctcatggacatccgc
tgtcgcaccacacagatcgccatgagcttcgcacagagcgaaaacctcctgggtattagt
gcccacactgaggagctccttcagaatctggagcacatccgagaggcccagtctaaaggc
ctggtagtgttctgctggggagacctcaacaacgaccacgacaacaggaccaagctacgg
gaacagggcattgacggactcatctatgacaggatctgtgacgaccaggtcgagcagcct
aacatcttcaaagtagaggagcaacacacgctgcaggaaacgctcaagagctttgtgtgt
tcctgctacaccatcccctgccaggcggctcctgtctgcccctcctccatctccaaggag
cacaacggcagtgcagagtctgactcgggcctcagctcctcctga
DBGET
integrated database retrieval system
