Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139407299
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Entry
139407299 CDS
T10872
Name
(RefSeq) transcriptional repressor protein YY1-like isoform X1
KO
K09201
transcription factor YY
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla03082
ATP-dependent chromatin remodeling
ocla03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
139407299
03083 Polycomb repressive complex
139407299
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ocla03000
]
139407299
03036 Chromosome and associated proteins [BR:
ocla03036
]
139407299
03029 Mitochondrial biogenesis [BR:
ocla03029
]
139407299
Transcription factors [BR:
ocla03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
139407299
Chromosome and associated proteins [BR:
ocla03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
PR-DUB complex
139407299
Mitochondrial biogenesis [BR:
ocla03029
]
Mitochondrial quality control factors
Regulator of mitochondrial biogenesis
Ubiquitas transcription factors
139407299
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-H2C2_2
zf-C2H2
zf-C2H2_4
C2H2_ASCIZ
TFIIIA_zf-C2H2
Raffinose_syn
zf-C2H2_ZN142
IBR
Motif
Other DBs
NCBI-GeneID:
139407299
NCBI-ProteinID:
XP_071007068
LinkDB
All DBs
Position
4:77300521..77308331
Genome browser
AA seq
376 aa
AA seq
DB search
MASGDTLYIEADGSEMPAELVELHEIEVETIPVETFETTVVGGDDDQPMIALQPLVSDDP
NSIHHHHQEVILVQTREEVVGGDDSDMLADGGYEDQILIPVPAPGVEDEYIEQTLVTVAG
KNSVGRTKRGVGGSGKKTGQKSYLGAVEPSSRKWEQKQVQIKTMEGEFSVTMWASDDKKD
IDHESVVEEQIIGENSPPDYSEYMTGKKLPPGGIPGIDLSDPKQLAEFARSVSICLNSPV
HQGMKPRKVKEDDAPRTIACPHKGCTKMFRDNSAMRKHLHTHGPRVHVCAECGKAFVESS
KLKRHQLVHTGEKPFQCTFEGCGKRFSLDFNLRTHVRIHTGDRPYVCPFDGCNKKFAQST
NLKSHILTHAKAKNNQ
NT seq
1131 nt
NT seq
+upstream
nt +downstream
nt
atggcatcgggcgatacgctttatattgaggcggacggctcggagatgccggccgaacta
gtggagttacacgagatagaggtggaaacgataccggtagagactttcgagactacagtg
gtcgggggagacgacgaccagccgatgatagcactccagccgctggtatcagacgacccg
aattcgatccaccaccaccatcaagaagtgatcctagtgcagacaagagaggaagttgtt
ggcggggatgattcggatatgctagcggacgggggttacgaggatcaaatcctcatcccc
gtcccagcacccggggtggaagacgagtacatcgaacagactctggtgactgtagccggg
aaaaactcggttggtcggacgaagagaggggtaggcggcagtggcaaaaaaactggccaa
aagagttatttgggtgctgtagaaccaagcagtagaaaatgggaacagaagcaggtgcaa
ataaagactatggagggggaattctctgttacaatgtgggcttcggatgacaaaaaagac
attgaccatgagtcagttgttgaagaacagatcattggggagaattcccctccggactac
tctgaatacatgacggggaagaagctgccccctggagggatacctggcatcgacctgtca
gatcccaaacagctggcagagtttgccaggtcagtgtctatctgcctaaactcacctgtc
catcaagggatgaagccgaggaaggtaaaagaagacgacgcgcccaggacgatagcctgc
cctcacaaaggctgcacaaagatgttcagggacaattcagcgatgaggaagcatctccac
acccacgggcctcgtgtgcacgtctgtgccgagtgtggcaaggccttcgtagagagttcc
aaactcaaacgtcaccaactcgttcacacaggggagaaacccttccaatgtacctttgag
ggctgtgggaagaggttttcgctggactttaacttgcgcacacacgttcgtatccacacc
ggagaccggccctacgtatgcccctttgacggctgcaataagaagtttgcccagtcaacc
aatctcaagtctcacatcctcacacacgccaaagccaaaaacaaccaatga
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integrated database retrieval system
