Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139407324
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Entry
139407324 CDS
T10872
Name
(RefSeq) heterogeneous nuclear ribonucleoprotein U-like isoform X1
KO
K12888
heterogeneous nuclear ribonucleoprotein U
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla03040
Spliceosome
Brite
Spliceosome [BR:
ocla03041
]
Common components
Common spliceosomal components
hnRNP proteins
139407324
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Ortholog
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Gene cluster
GFIT
Other DBs
NCBI-GeneID:
139407324
NCBI-ProteinID:
XP_071007110
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Position
4:78987726..79004309
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AA seq
911 aa
AA seq
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MSSINVKKLKVNELKDELKKRQLSDKGLKAELMDRLQAALDEEALAGDDPIGLEAAEGGS
SGAADDQEDMGEDEEDDEDPVEESMEANEEEENGNGEGDPAVECEENAAQEDDEMGEVED
EDMDPMLKEGVDDMEKITLDAEDGEPGDQPAEGDADKDTNADQKNKKGVKRRREEHGRGY
FEFIEENKYSWSSLKSPLPPLEEEDEEFDDTTVCLDNYNCDLHFKVSRDRYSASSLTMES
FAYLWSGGRASYGLTQGKACYEMKLTEKIPVKHIFSKNMEVHEVQVGWSMATGSLLLGEE
EHSYAYSGKGKKTTNCVTEDFGETYDENDVICCLINFEGEEVEISFSKNGKEPVVAFQVS
KESLAGRALFPHVICHNCSVEFNFGQMETPYFPQPEGYTFLQQVAMDDRVRGPKGPNTKK
ECEVIAMVGLPGSGKTTWVNKHIQENPGKYYILGSDTIVEKMMIGSLKRQAKDTTKLTAI
SQRAPLFLGKFIEIAARKKRNYILDHTNLSAPGQKRKMCLFAGYQRKAVVVCPSDDDYKE
RAQKKAESDGKDVPEHALLKMKGFFTLPEEGDSFAEVSYAELQKEESSKLVEQYKEESKA
ALPAEKKPNQGALTPNRGGVVRGGGRGKNQFNRGGGPGQRGVVRGGFQQRGNFRGAPGPR
GGFTRPPRGFMPPPAFRGGFANRGNFNRGGGLMAPQRGAPRGGPIRGNMGYRGGAMNRGG
PPMNRGGANMSRGGGANMSRGGGANMSRGGGANMSRGGGANMSRGGGANMSRGGGANMSR
GGGANMSRGGGANMSRGGGGNRVNFNQGFQPRGSSSRGNFGNKSSGFGDGRNAGGRGGGF
GDSRNSGGRGGGFGDNRNAGGRGRGFVDSRNAGGRGGFGFGMDKAQAFNQSWQQGLWNQK
PWRQQYQPGYY
NT seq
2736 nt
NT seq
+upstream
nt +downstream
nt
atgagttcaattaacgtaaaaaaactgaaagttaacgagttgaaggacgagctgaaaaag
cgtcagctgtcggacaaggggctgaaggccgagttgatggaccggctgcaggccgcgctt
gacgaagaggccctggctggagatgatcccattgggctggaggccgcggagggaggcagc
tctggggccgctgatgatcaagaggacatgggggaagacgaagaagacgacgaggatccg
gtcgaagaaagcatggaggccaacgaggaggaggagaatggaaacggagagggagacccc
gccgtagaatgcgaggagaacgcggctcaggaggacgacgaaatgggcgaggtggaagat
gaagacatggatccaatgttgaaggaaggtgtggacgacatggagaaaataacgttagac
gcagaggatggtgagcctggagatcagccagcagagggggatgcggacaaagacacgaat
gctgatcagaagaataagaagggtgttaagagacgccgggaggaacatggaaggggctac
tttgaatttattgaagagaacaaatacagctggtctagtctcaagtctccactgccaccc
ctggaagaggaagatgaagagtttgacgatacaacagtctgcctggacaactataactgc
gacctgcacttcaaggtgtcccgggaccggtacagtgcgtcctctctcaccatggagagc
tttgcctacctttggtctgggggcagggcctcgtacggcctgacccagggcaaggcctgt
tacgagatgaagttaactgagaagattccagtgaagcacatcttcagtaagaacatggag
gtccatgaggtccaggttggatggtccatggctactggcagtctgctcctcggtgaggag
gagcattcttatgcctactctggcaaaggcaagaagactaccaactgcgtgacagaagat
tttggagagacttacgatgagaacgacgtcatctgctgcctcatcaactttgagggcgag
gaggtggagatttccttttctaagaatggtaaggagccagttgtggccttccaggtcagt
aaggagtccctggcagggagagctctcttcccccatgtcatctgccacaactgttctgtg
gagttcaactttggccagatggaaacaccctacttcccccagccagagggctacaccttc
ctgcagcaggtcgccatggacgaccgtgtacgcggacccaagggacccaacaccaagaag
gagtgtgaggtgattgctatggtaggcctgcccggctcaggaaagaccacctgggtgaac
aagcacatccaggagaaccctgggaaatattacatcctgggcagcgacaccatcgtggag
aagatgatgattggcagcttgaagcgtcaggcgaaggacacaactaagctcacggccatt
tcccagcgtgctcctctcttcctgggcaagttcattgagatcgctgctcgcaagaagagg
aactatatcctggaccataccaacctgtctgccccaggccagaagaggaagatgtgtctg
tttgctgggtaccagcggaaggctgtggtggtctgcccctcagacgacgactacaaggag
agggcccagaagaaagcagagagcgacggcaaagacgtgcccgagcacgctctcctcaaa
atgaaaggattcttcaccctgccagaggagggcgacagcttcgctgaggtgagctacgct
gagctgcagaaggaggagtcctccaagctagtggagcaatacaaggaggagagcaaggcg
gccctgccggctgagaagaagcccaaccagggggccttgacccccaatagaggaggtgtt
gtccggggtggaggcagaggcaagaaccagttcaaccgtggaggaggacccggccagaga
ggagttgtacgaggaggcttccagcagaggggcaacttcagaggagctccaggtcctcgt
ggtgggttcactcgcccccctcgaggcttcatgccccctccagccttcaggggtggattc
gccaaccggggcaacttcaacaggggcggcggcctcatggccccccagcgtggggcccca
agagggggaccaattaggggcaacatgggctacagaggtggagccatgaacaggggcggt
ccaccaatgaacagaggtggagccaacatgagccggggaggtggagccaacatgagccgg
ggaggtggagccaacatgagccggggaggtggagccaacatgagccggggaggtggagcc
aacatgagccggggaggtggagccaacatgagccggggaggtggagccaacatgagccgg
ggaggtggagccaacatgagccggggaggtggagccaacatgagccggggcggcggagga
aacagggtcaactttaaccaggggttccagcccagaggaagcagcagccgtggaaacttt
ggcaataagagcagcggatttggtgatggcaggaatgctggaggtcgtggtggcggattt
ggggacagtagaaactctggaggacgtggcgggggatttggggacaacaggaacgctgga
ggacgtggcaggggatttgtggacagcaggaatgctggaggacgtggaggctttggtttc
ggcatggacaaggctcaggccttcaaccagagctggcagcaagggttatggaaccagaag
ccatggagacagcagtatcagccaggatactattaa
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