Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139407358
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Entry
139407358 CDS
T10872
Name
(RefSeq) 26S proteasome regulatory subunit 10B-like
KO
K03064
26S proteasome regulatory subunit T4
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla03050
Proteasome
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03050 Proteasome
139407358
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
ocla03051
]
139407358
Proteasome [BR:
ocla03051
]
Eukaryotic proteasome
Regulatory particles
PA700 (19S proteasome)
ATPase subunits
139407358
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
Prot_ATP_ID_OB_C
AAA_lid_3
AAA_5
AAA_16
AAA_2
RuvB_N
AAA_22
PRS7_OB
DUF815
nSTAND3
Prot_ATP_ID_OB_N
AAA_14
AAA_7
Csa3_N
AAA_lid_PRS2_C
AAA_11
RNA_helicase
AAA_3
TIP49
AAA_18
AAA_33
Mg_chelatase
bpMoxR
AAA_24
NPHP3_N
AAA_28
DUF5906
AAA_25
DUF3829_2nd
TsaE
NACHT
Parvo_NS1
IstB_IS21
DRC7_C
AAA_17
COG4_N
GAS
ATPase
Motif
Other DBs
NCBI-GeneID:
139407358
NCBI-ProteinID:
XP_071007174
LinkDB
All DBs
Position
4:complement(81852333..81856449)
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AA seq
389 aa
AA seq
DB search
MADTREKGLQDYRKRLLEHKEIDGRLKELREQLKEQTKQYEKSENDLKALQSVGQIVGEV
LKQLTEEKFIVKATNGPRYVVGCRRQLDKSQLKPGTRVALDMTTLTIMRYLPREVDPLVY
NMSHEDPGSISYSEIGGLAEQIRELREVIELPLTNPELFLRVGIIPPKGCLLYGPPGTGK
TLLARAVASQMDCNFLKVVSSSIVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGG
RRFSEGTSADREIQRTLMELLNQMDGFDTLHRVKMIMATNRPDTLDPALLRPGRLDRKIH
VELPNEQARLDILKIHSGPITKHGEIDYEAIVKLSDGFNGADLRNVCTEAGMFAIRTDHE
YVTQEDFMKAVRKVADSKKLESKLDYKPI
NT seq
1170 nt
NT seq
+upstream
nt +downstream
nt
atggctgacaccagagaaaagggacttcaagattacagaaaaagattacttgaacataaa
gagattgatggacgtttaaaagagttgagggaacagctcaaggaacaaacaaaacaatat
gaaaaatctgaaaatgacctgaaggccttacaaagtgttggtcagattgtcggtgaagtg
ctcaaacagctgacagaggagaaattcattgtcaaggcaaccaatggccctcgctatgtt
gttggctgccgcagacaactggataaatcgcagctcaaaccaggcacaagagtggccctg
gacatgaccaccctcaccattatgagatatctgcccagagaggtggaccccttggtgtac
aacatgtcccatgaagacccaggcagcatctcttactcagagatcgggggcttggccgag
cagatccgtgaactgagagaggtgattgagctgcccctcaccaaccctgagctattcctg
agggtggggattatccctccaaagggctgcctgctctacggacctccaggcaccggaaag
actcttctggccagagcggtggccagtcagatggactgtaacttcctcaaggttgtgtcc
agctccattgtggataagtacattggagagagcgccaggctcatcagggagatgttcaac
tatgccagggaccaccagccctgcatcatctttatggatgagatagacgccatcggtggc
cgaaggttctcagagggcacgtcagctgacagagagatccagaggactctgatggagctg
ctgaaccaaatggatggctttgacaccctgcacagagtcaagatgatcatggccaccaac
cggcctgacaccctggaccccgcgctgctgcgtcccggcagactggaccgaaagatccat
gttgagctgcccaatgaacaggcccgtttggacatcctgaagatccactctggccccatc
accaaacacggagagatagattacgaagcgatcgtgaagctttcggatggcttcaacgga
gccgatttgagaaatgtctgcactgaagcaggtatgtttgcgatccgtaccgatcacgag
tacgtcactcaagaggatttcatgaaggcggttcgcaaggtggccgattcgaagaagctt
gaatccaagctggactacaagcccatataa
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integrated database retrieval system
