Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139407511
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Entry
139407511 CDS
T10872
Name
(RefSeq) BLOC-2 complex member HPS3-like
KO
K20190
Hermansky-Pudlak syndrome 3 protein
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Brite
Membrane trafficking [BR:
ocla04131
]
Endosome - Lysosome transport
Others
BLOC-2 complex
139407511
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
139407511
NCBI-ProteinID:
XP_071007402
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Position
4:43888175..43916716
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AA seq
1051 aa
AA seq
DB search
MVHVYNCHPFASQQIVQAEQEPGLVCCGGGVLFVESAGGCKIEAFQLEAEGCPLICRFAT
MGTVQSILHSEIGDYLVTIEEKNNVTYLRTYTNWRYQVAEKTRVGVRLLGHFLRGSSMRG
APKEQMEIIEIPLFERPLCVACCGVTGDLLVGCPKSLVLFSLKRQALNDKLSILDFERCL
ILHLPGLSPQQVAICAGYIALQAELEVLVVKLERLPGSAPTQKSADKKSQDHCLVPKDMI
TGAEHNNEIEVRKEGLAGLLDQDDFFIFPKHQELLGDRAKDCGVKVSLEWTGMESEARGI
LAITYILYRRFAPDFFQGCSVEDTRLHSLQFHPVFTSNQEVCAEGGRGVEPTCVFCFFSL
PNTGYVYSVRGGVEMVSVYQYPEKAQQAVLTDLFLHIITKNALQCFSVRCSAVAARAEDP
YIDTTMKACPPITMEVCALRIQLFIGLKALCHDRHHIVLLTAADVETREDTERAARRNLN
RKSSSTKPRDPIEMSRGWNLYVVNTVPPLQLYNEMVEYSKKYEETNPLSQSCLHLLSEAH
LLLRATLLDPRVGNPVEQPQSSDQNLAQSLGYTTTDKIGSTTDRQELQQAFQESCAHLGD
CFSRFDKRDCHLALPYYKMSGLSVTEVISRNRCLSSSPCGYGKGFLFFLKHSLYEETMEE
LTEETANEVLDIFGVAEPSQLPHVIASPSMVRASPDSGLAHLECLESIGAPSVPLTLSKA
ALALRMGDLQLYRQHMDRHTEMLQVYGFIEEHKLLLHGRGHTVVPTLLARHLRDSQEGLL
VAAMVALHENNKVKLDEADLFFQKLCGNLSGPQGGPQLLVDFWEALLMASSQEAVIQELL
FRLTSVYIDRVTRRDSQGMKPLKTADDLINSCSHYGVPYPWVSILTPAHFSIIQDHQEDL
QKLQSLLCGPTLDVSSILPLLEQLPDGDNAGLSVHLLCATKLDRHESSIERLLDRCPQAI
IPYANHELQNNKMTLWWQKLFPELCERTRAAGGENTILLSALKETLVVVAMELNPLEFLD
LLPDDGTAHFFLPHLLECSQRNLMTWSPYQP
NT seq
3156 nt
NT seq
+upstream
nt +downstream
nt
atggttcacgtatacaactgccatcccttcgcttcccagcaaatcgtgcaagccgaacag
gagcctgggttagtgtgttgtggcgggggtgtcttgtttgtggagtccgcgggaggatgc
aagatcgaggcatttcaactggaagcggaggggtgtcctcttatctgccgattcgccacc
atggggactgtgcagagcatcctgcacagcgagataggggactacctggtgaccatcgag
gagaagaacaatgtcacctacctccgcacctacaccaactggcgctaccaggtggccgag
aagacacgtgtgggtgtgcgtctgctgggccacttcctgcgtggctcatccatgcgtggg
gctcccaaggagcagatggagatcattgagattccgctgtttgagcgcccactgtgtgta
gcgtgctgtggggtgacaggggacctgctggtgggctgtcctaagagcctggtgctgttc
agtctcaagagacaggccctcaacgataagctctccatcctggactttgagcgttgtctg
atcctccacctcccaggactgtcgccccaacaggtggcgatctgtgcggggtacattgcc
ctgcaggcagagctcgaagtgctggtggtcaagctggagagacttcctggctccgcccct
acccagaagtcagctgacaagaagtcccaggaccactgtctagtccccaaggatatgatc
actggagcagaacacaacaatgagatagaggtgaggaaagagggtcttgctggtctcctt
gatcaggatgacttcttcatattccctaagcaccaggagctgctgggggacagggctaag
gactgtggggtcaaggtctctctggagtggacaggcatggagagtgaggccaggggtatc
ctcgctatcacctatatcttatacagacgttttgctccagacttcttccaaggctgcagt
gtggaggatacccgcctgcactccctgcagttccaccctgtattcaccagtaaccaggaa
gtgtgtgctgagggggggagaggggtggagccgacgtgtgtgttctgtttcttctcgctg
cccaacacgggctacgtgtacagcgtgaggggtggagtggagatggtctcagtctatcag
tatccagagaaagcccagcaggccgtcctcactgacctcttcctccacatcatcaccaag
aatgctctccagtgtttctcagtgaggtgttctgcagtggcagccagagctgaggaccct
tacatcgataccaccatgaaggcctgtcctcccatcaccatggaggtgtgtgctttgcgg
atccagctgttcattggtctaaaggctctgtgtcacgatcgccaccacatcgtcctgcta
accgctgcagacgtggagaccagggaggacacagagagggcagctcgcaggaacctgaac
aggaagtcatcctccaccaagccccgggatcccattgagatgagtcgcggctggaatcta
tacgtggtcaacaccgtccccccactccaactctacaatgagatggtggagtatagtaag
aagtatgaggagaccaaccctctgtctcagagctgtctgcacctgctcagtgaggcccac
cttctcctgagagccacgctcctggacccccgggtgggaaatccagtggagcagcctcag
agcagtgaccagaacctagcccagtccctgggatatacaacaacagacaaaataggcagc
accactgacagacaggagctacagcaggccttccaggagagctgtgcccatttaggagac
tgcttcagtaggtttgataagcgtgactgccacctggccctgccctactataagatgtca
ggcctgtctgtgacagaggtgatctccaggaacaggtgtctgtccagcagcccctgtggc
tatgggaaggggttcctcttcttcctcaaacactcactctatgaggagaccatggaggag
ctcactgaggagacagccaacgaggtgctggatatcttcggtgtggctgagccgtcccag
ctcccccatgttatagccagcccctccatggtcagagcaagccctgacagtggcctggcc
cacctagagtgcctggagtccatcggagccccctctgtacccctcactctctccaaggct
gccctggccctccgcatgggagacctgcagctctacagacaacacatggacagacacaca
gagatgctgcaggtatatgggttcatcgaggagcacaaactgctgctgcatggcagaggg
cacacggtggtgcccaccctcctggcacgccacctcagggacagccaagaaggtctgctg
gtagcagccatggttgcgctacacgagaataacaaggtcaaactggacgaggctgacctc
ttcttccagaagctttgtgggaacctgtcagggccccagggaggccctcagctgctggtg
gacttctgggaggccctgctgatggcctcgtcacaggaagctgtcatccaggagctgctg
ttccgcctcacctctgtctacattgaccgcgtcacgcgccgagacagccaaggcatgaaa
ccactcaagaccgcagatgacctgatcaactcatgttctcactatggtgtgccatatccc
tgggtcagcatcctgactccagctcacttcagtatcattcaagatcaccaggaggacctc
cagaaactacagtccctgctgtgtggtcccaccctggatgtgtcgtccatcctgcccctg
ttggagcagctgccagacggggacaacgcggggctaagtgtgcacttgctctgtgccacc
aagctggaccgccacgagagctccatcgagaggcttctagaccgatgtcctcaggcaatc
atcccctacgctaaccacgagctgcagaataacaaaatgactctgtggtggcagaaactg
tttcctgagctgtgtgagagaaccagagcagcagggggagagaacaccatcttactgtct
gcactcaaagaaacgctggtggttgttgccatggagctgaatccactggagtttctggac
ctgttgcctgatgacgggacggcacactttttcctgcctcacctgctggagtgcagccag
agaaatctcatgacatggtctccataccagccatga
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