Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139407545
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Entry
139407545 CDS
T10872
Name
(RefSeq) fanconi-associated nuclease 1 isoform X1
KO
K15363
fanconi-associated nuclease 1 [EC:3.1.21.-
3.1.4.1
]
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
139407545
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ocla03400
]
139407545
Enzymes [BR:
ocla01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.1 phosphodiesterase I
139407545
DNA repair and recombination proteins [BR:
ocla03400
]
Eukaryotic type
DSBR (double strand breaks repair)
FA (Fanconi anemia) pathway
Other FA pathway factors
139407545
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAN1_TPR
VRR_NUC
Fan1_SAP
FAN1_HTH
DUF4363
CEP104_ZnF
Motif
Other DBs
NCBI-GeneID:
139407545
NCBI-ProteinID:
XP_071007467
LinkDB
All DBs
Position
4:complement(7207009..7225344)
Genome browser
AA seq
1071 aa
AA seq
DB search
MAEKGNKRKQRSLSITKRKGYVSSKDGKKSANACPGTASISSFFNNALPPRLPCPLCGQL
VPRFRINQHIDSQCQNFQREDGASMDTASACNIVTTTKLASSHSPSRRASKDHDPDTGPS
CSKEEKPQREANTSPYFKKSGASSSSQQVNTREMSSKTVIRPIDIGSRLSSKLSRRGLKQ
RLKSPEDIQSQVDDIITIQESPERDRRPEDLSSSQKENHLPQGFGDQTTCLMDTETTNVT
VESHSTISLGRPQVESREETLECLESKSEFKLESLSPVVSMAPRPLSYAPSRLNKRKKRG
KAEVSVKTQRMSTRSKKARCEKRDGEEPDDDLTRNKLLTSTTTTADKQHGTEESSTGNCD
TLLKSSTQVPEEERQRRKVKLEEEGEQEQEESTVTGSSDQPTEPDTDRGTDKQDSESPRL
PYYLGNFLTVLEAVLENEDDRMLFNQEDLSAIHGFERLSVTGQKLYVRLFQRKLKWLQVN
KLNYNEISTDLGPVAQELVEGGFLQTDSDLQELGEVLDLLPAPELRSLAKTFHLGGPGSG
TQKHQLVEGLLKLSRQRSLFALAPGQNNIGTVILKRAKQLAGSCVRLHRGPRAVFSRVLL
LFSLTDGLEEEETAGGGQGQLYTILLVNSGRLAFPDYTVQRRAKLFLDREDLIRYEAAMR
ALQEVITAMQTGHWEDALGLYTAAKTTWQETSKTYDLRCHQEELPVFLRCFTTGWAYTRI
LSRGVEVLQRLRCYKEAVKELRSLLSQSVYCPDSRGRWWDRLALNLQQHLKLPEQAISSI
RDGLSDPLVRTGHQLSLHQRANRMKESPSYKNYHPVLSDLPTIHVNDVTHVTIRGQLFPH
EGGTGKNVFLMPAEEGAEGGYSTVMCSVEELSLAHYRRQGFDQGIHGEGSTFSTLFGLLL
WDVIFMEGIPDVFRNPYQPCPLDLFTDCFYGNRREAIETRVQVLCEASIETLHNLMAEAW
TNQEGKVCSLVNWERFSSLQRAQSLVSCLGGSFLGGMITRMAKDYRHCRAGLPDLVVWNT
SNNTYKLVEVKGPSDKLSQKQQIWLDELQRLGADVEVCHVTATGARGAWLE
NT seq
3216 nt
NT seq
+upstream
nt +downstream
nt
atggcagagaaaggaaacaaacgcaaacagagaagcctctcaataacaaagagaaaagga
tacgtcagtagtaaagatggtaagaagagtgccaatgcatgtcctggtacggcctccatc
tcatcattcttcaacaatgccctgccacctagactgccatgtcctctgtgtggtcagcta
gtgccacggttcaggataaaccaacacattgactcacagtgtcagaactttcagagggaa
gatggtgcgtccatggatactgcttcagcctgtaacattgttactacaacaaagctggca
tcgtctcactctccttccaggagggccagtaaggaccatgatccagacacagggccttcc
tgttcaaaggaggaaaagcctcagcgagaggccaacaccagcccatactttaaaaagtct
ggtgcttcttcttcttctcagcaggtaaacaccagagagatgagcagtaagactgtaatc
aggcccattgacataggtagcaggctgtcctctaagctctccaggaggggcctgaagcaa
aggctgaagtcccctgaggacatacagtcgcaggttgatgacatcatcaccatccaggag
tccccagagagagacagaaggcctgaggacctgagcagctctcagaaggagaaccacctc
cctcaggggtttggtgaccagacaacatgcttaatggacacagagacaacaaatgtcaca
gtggaaagtcacagtactatttcactgggcagacctcaggtagaaagcagagaagaaact
ttagaatgtttagaatccaaatctgaattcaaattagaatcattgtctccggtagtttct
atggccccgcgacctctgtcctatgctccatccagactgaacaagaggaagaaacgaggg
aaagcggaggtctctgttaaaacacagaggatgtctactcgcagcaagaaagccagatgt
gagaagagagatggtgaagaaccagatgatgacctcactagaaacaaactccttacgtca
acaacaacaacagctgataagcaacacggaacagaagaatcttcaactggtaactgtgac
actcttttgaagagcagcacacaggtgcccgaggaggagcgtcagagaagaaaagtaaaa
ctagaggaagaaggagaacaagaacaagaagaatccacagtgaccggtagcagtgatcag
cctacagagcctgacacagacagaggaactgataagcaagattccgagtcaccgcggtta
ccgtactacctgggtaacttcctgaccgtgctagaggcagtgctggagaatgaagacgat
aggatgctgttcaatcaagaagacctttcagccatacacggctttgagcgtctgtcagtg
acaggacagaagctgtatgtgagactgttccagaggaaactgaagtggctccaggtcaac
aagctaaactataatgagattagcactgacctgggacctgtagctcaggagctggtggaa
ggaggtttcctacagacagacagtgacctccaggagcttggggaggtgctggacctgctg
cccgccccggagcttcgtagcctggctaagacgttccacctggggggtcctgggtctggt
acccagaaacatcagctggtggagggactcctgaagctgagcagacagaggtctctgttc
gccctggcccctggacagaacaacattgggactgtcatactaaagagggcgaagcagcta
gctggttcctgtgtacgtctgcatcgcggccccagggctgtgttctctcgcgtcctcctc
ctcttctccctgacagatggtctggaggaggaggagacggccggagggggtcagggtcag
ctctacaccatcctactggtcaactctggccgactggccttccctgactacaccgtacag
cgcagagccaaactgttcctggatagagaagatcttatcaggtatgaggcggcgatgcga
gcgctgcaagaggtgatcacagccatgcagacaggccactgggaggacgctctgggactt
tacactgcagccaagacgacctggcaggagacgagcaagacgtacgacctcaggtgccac
caggaagagctgccagtgttcctgcgctgtttcaccacagggtgggcctacacacgcatc
ctgtccaggggagtagaagtactacagaggttacgttgctacaaggaagcggtgaaggag
ctgcgctcactattgtcccagtcagtctactgtccagacagcagggggcgatggtgggac
agactggcactcaatctccagcagcacctcaaactacctgaacaggctatcagctccatc
agagacggtctctctgaccccttggtgaggacgggccaccagctttcactccaccagaga
gccaataggatgaaggaatcccctagctacaagaattaccaccctgtactcagtgacctg
cccaccatccacgtcaacgatgtcactcatgtcactatccgagggcagctcttcccccac
gagggggggacagggaagaatgtgttcctcatgcctgctgaggaaggggcagagggagga
tactccactgtcatgtgttctgtggaagagctgtcactggcacactaccgtcggcaaggc
tttgaccaagggatccatggagagggctccacgttttccactctgtttggtcttctgtta
tgggacgtcattttcatggagggtattccagacgtcttccggaatccctaccagccctgc
ccactggacctcttcacagactgtttctatgggaaccggagggaggcgatagagacgcgt
gtgcaggtgctctgtgaggcgtccattgagacgctgcacaacctgatggctgaggcctgg
accaatcaggaggggaaggtgtgttcactggtcaactgggagcgcttctcatccctgcag
cgggcacagagtctagtgtcttgtctgggtggatcgtttctgggagggatgatcactagg
atggccaaggactacagacactgtcgagcaggactgcctgacctagtggtgtggaacaca
tccaacaacacctacaagctggtggaggtgaagggccctagcgacaaactgtcccagaag
caacagatctggttggatgagctacagagactgggggctgatgtagaggtttgtcacgtc
actgccaccggggccagaggagcttggctggaatag
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